RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 UMODL1Q5DID0 1318 aa4.46□□□□□ -1.69
SCARNA13-201ENST00000516672 EVC2Q86UK5 1308 aa4.46□□□□□ -1.69
SCARNA13-201ENST00000516672 MYO3BQ8WXR4 1341 aa4.46□□□□□ -1.69
SCARNA13-201ENST00000516672 LRRK2Q5S007 2527 aa4.46□□□□□ -1.69
SCARNA13-201ENST00000516672 PPM1GO15355 546 aaPredicted RBP4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 MYO1BO43795 1136 aa4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 RBMXP38159 391 aaKnown RBP4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 CCL23P55773 120 aa4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 HYAL1Q12794 435 aa4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 LPAL2Q16609 132 aa4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 AASDHQ4L235 1098 aaPredicted RBP4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 SPECC1Q5M775 1068 aa4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 GADL1Q6ZQY3 521 aa4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 DDX46Q7L014 1031 aaKnown RBP4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 RPUSD2Q8IZ73 545 aaKnown RBP4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 USP6NLQ92738 828 aa4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 EYA1Q99502 592 aa4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 SLC52A2Q9HAB3 445 aa4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 SPINK5Q9NQ38 1064 aaPredicted RBP4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 SLC45A1Q9Y2W3 748 aa4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 USP15Q9Y4E8 981 aaPredicted RBP4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 PCDHGA2Q9Y5H1 932 aa4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 ASXL3Q9C0F0 2248 aa4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 SIP14410 1827 aa4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 ECM29Q5VYK3 1845 aa4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 LRBAP50851 2863 aa4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 ARAP2Q8WZ64 1704 aa4.46□□□□□ -1.7
SCARNA13-201ENST00000516672 OTOGQ6ZRI0 2925 aa4.45□□□□□ -1.7
SCARNA13-201ENST00000516672 KIAA1217Q5T5P2 1943 aa4.45□□□□□ -1.7
SCARNA13-201ENST00000516672 RP1L1Q8IWN7 2480 aaPredicted RBP4.45□□□□□ -1.7
SCARNA13-201ENST00000516672 FN1P02751 2386 aaKnown RBP4.45□□□□□ -1.7
SCARNA13-201ENST00000516672 STK25O00506 426 aa4.45□□□□□ -1.7
SCARNA13-201ENST00000516672 SP100P23497 879 aaPredicted RBP4.45□□□□□ -1.7
SCARNA13-201ENST00000516672 ITGAEP38570 1179 aa4.45□□□□□ -1.7
SCARNA13-201ENST00000516672 NDUFV1P49821 464 aa4.45□□□□□ -1.7
SCARNA13-201ENST00000516672 TBC1D8BQ0IIM8 1120 aa4.45□□□□□ -1.7
SCARNA13-201ENST00000516672 SUSD4Q5VX71 490 aa4.45□□□□□ -1.7
SCARNA13-201ENST00000516672 PCSK4Q6UW60 755 aa4.45□□□□□ -1.7
SCARNA13-201ENST00000516672 FASTKD5Q7L8L6 764 aaKnown RBP4.45□□□□□ -1.7
SCARNA13-201ENST00000516672 ZNF687Q8N1G0 1237 aa4.45□□□□□ -1.7
SCARNA13-201ENST00000516672 SMRP1Q8NCR6 262 aa4.45□□□□□ -1.7
SCARNA13-201ENST00000516672 VWCEQ96DN2 955 aa4.45□□□□□ -1.7
SCARNA13-201ENST00000516672 PSMG3-AS1Q96PY0 264 aa4.45□□□□□ -1.7
SCARNA13-201ENST00000516672 IGFLR1Q9H665 355 aa4.45□□□□□ -1.7
SCARNA13-201ENST00000516672 CCDC86Q9H6F5 360 aaKnown RBP4.45□□□□□ -1.7
SCARNA13-201ENST00000516672 STARD7Q9NQZ5 370 aa4.45□□□□□ -1.7
SCARNA13-201ENST00000516672 FRMPD4Q14CM0 1322 aa4.45□□□□□ -1.7
SCARNA13-201ENST00000516672 SALL3Q9BXA9 1300 aa4.45□□□□□ -1.7
SCARNA13-201ENST00000516672 IBTKQ9P2D0 1353 aaPredicted RBP4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 CDK5RAP2Q96SN8 1893 aa4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 LINC01553A4QN01 128 aa4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 FOXD2O60548 495 aaPredicted RBP4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 RETP07949 1114 aa4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 CYBAP13498 195 aa4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 CYP2C19P33261 490 aa4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 GTF2F1P35269 517 aaKnown RBP eCLIP4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 ZNF528Q3MIS6 628 aa4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 PLEKHO1Q53GL0 409 aaPredicted RBP4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 FAM47AQ5JRC9 791 aa4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 AMER1Q5JTC6 1135 aaPredicted RBP4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 C1orf141Q5JVX7 400 aa4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 STPG1Q5TH74 334 aa4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 PRICKLE2Q7Z3G6 844 aa4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 FMNL3Q8IVF7 1028 aa4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 SRRM1Q8IYB3 904 aaKnown RBP4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 C17orf80Q9BSJ5 609 aa4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 TEX13AQ9BXU3 409 aaPredicted RBP4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 ERVK-5Q9HDB9 667 aa4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 TIMELESSQ9UNS1 1208 aa4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 F8P00451 2351 aa4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 BOD1L1Q8NFC6 3051 aa4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 TSC2P49815 1807 aa4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 MROH7Q68CQ1 1323 aa4.44□□□□□ -1.7
SCARNA13-201ENST00000516672 UBR2Q8IWV8 1755 aa4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 A0A0G2JLL6 359 aaPredicted RBP4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 CXCL11O14625 94 aa4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 LILRB5O75023 590 aa4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 UFL1O94874 794 aa4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 NTSR2O95665 410 aa4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 DCNP07585 359 aaKnown RBP4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 TNFAIP1Q13829 316 aa4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 MORN1Q5T089 497 aa4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 LAIR1Q6GTX8 287 aa4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 PRRT2Q7Z6L0 340 aaPredicted RBP4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 TMCO2Q7Z6W1 182 aaPredicted RBP4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 SIX5Q8N196 739 aa4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 ZBTB44Q8NCP5 570 aa4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 PIP4K2CQ8TBX8 421 aa4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 MDM1Q8TC05 714 aa4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 SCLYQ96I15 445 aa4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 PRMT6Q96LA8 375 aaPredicted RBP4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 TMEM39BQ9GZU3 492 aa4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 HIPK3Q9H422 1215 aa4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 RAB23Q9ULC3 237 aa4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 GRIN2DO15399 1336 aa4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 UBN2Q6ZU65 1347 aa4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 ITPR2Q14571 2701 aa4.43□□□□□ -1.7
SCARNA13-201ENST00000516672 UTP20O75691 2785 aaKnown RBP4.42□□□□□ -1.7
SCARNA13-201ENST00000516672 NID2Q14112 1375 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms