RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 GREM2Q9H772 168 aa3.14□□□□□ -1.91
RNU1-48P-201ENST00000516400 TTF2Q9UNY4 1162 aaKnown RBP3.14□□□□□ -1.91
RNU1-48P-201ENST00000516400 JAG2Q9Y219 1238 aa3.14□□□□□ -1.91
RNU1-48P-201ENST00000516400 SLC4A7Q9Y6M7 1214 aa3.14□□□□□ -1.91
RNU1-48P-201ENST00000516400 SCN10AQ9Y5Y9 1956 aa3.14□□□□□ -1.91
RNU1-48P-201ENST00000516400 ZNF536O15090 1300 aa3.14□□□□□ -1.91
RNU1-48P-201ENST00000516400 DENND4AQ7Z401 1863 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 PLXNA4Q9HCM2 1894 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 CELSR2Q9HCU4 2923 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 GREB1Q4ZG55 1949 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 PLXNB3Q9ULL4 1909 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 A0A1B0GUL7 405 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 MYADML2A6NDP7 307 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 SLC15A5A6NIM6 579 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 DCDC2CA8MYV0 355 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 KBTBD13C9JR72 458 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 ADCY6O43306 1168 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 LMNAP02545 664 aaKnown RBP3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 PCCAP05165 728 aaPredicted RBP3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 LINC00271P0C7V0 271 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 ZNF865P0CJ78 1059 aaPredicted RBP3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 MAPK4P31152 587 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 ICAM3P32942 547 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 TNNI2P48788 182 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 ACLYP53396 1101 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 HERVK_113P62684 666 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 DCAF15Q66K64 600 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 CWF19L1Q69YN2 538 aaKnown RBP3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 PRR23BQ6ZRT6 265 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 ANKRD18AQ8IVF6 992 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 HERC6Q8IVU3 1022 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 GPRC5AQ8NFJ5 357 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 JARID2Q92833 1246 aaPredicted RBP3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 MAP4K1Q92918 833 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 FBXW7Q969H0 707 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 CCDC85AQ96PX6 553 aaPredicted RBP3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 TSEN34Q9BSV6 310 aaKnown RBP3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 NOC4LQ9BVI4 516 aaKnown RBP3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 SEMA4AQ9H3S1 761 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 CLEC1BQ9P126 229 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 AKAP9Q99996 3911 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 ELP1O95163 1332 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 BOD1L1Q8NFC6 3051 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 KIAA1217Q5T5P2 1943 aa3.13□□□□□ -1.91
RNU1-48P-201ENST00000516400 ASXL3Q9C0F0 2248 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 LINC01553A4QN01 128 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 DDTLA6NHG4 134 aaPredicted RBP3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 POTEMA6NI47 508 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 TRIM75PA6NK02 468 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 C1QTNF9BB2RNN3 333 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 ARVCFO00192 962 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 PER1O15534 1290 aaPredicted RBP3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 DIAPH1O60610 1272 aaKnown RBP3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 CTNND1O60716 968 aaKnown RBP3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 TBX10O75333 385 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 TAF5LO75529 589 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 PGK1P00558 417 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 CSF1RP07333 972 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 PRR29P0C7W0 189 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 C1QTNF9P0C862 333 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 TAL1P17542 331 aaPredicted RBP3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 CNGA1P29973 690 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 CLCN5P51795 746 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 RBM5P52756 815 aaKnown RBP eCLIP3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 CASP7P55210 303 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 CHRNDQ07001 517 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 SPP2Q13103 211 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 CAMK1Q14012 370 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 TCTN1Q2MV58 587 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 CCDC152Q4G0S7 254 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 MFSD14BQ5SR56 506 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 MFSD14CQ5VZR4 134 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 LARP1BQ659C4 914 aaKnown RBP3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 HHIPL2Q6UWX4 724 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 LBX2Q6XYB7 198 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 TMCO2Q7Z6W1 182 aaPredicted RBP3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 MAML2Q8IZL2 1156 aaPredicted RBP3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 CHAMP1Q96JM3 812 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 FAM84BQ96KN1 310 aaPredicted RBP3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 RTKNQ9BST9 563 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 PPP1R12CQ9BZL4 782 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 BTBD7Q9P203 1132 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 SETD2Q9BYW2 2564 aaPredicted RBP3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 PDZD2O15018 2839 aa3.12□□□□□ -1.91
RNU1-48P-201ENST00000516400 NAV1Q8NEY1 1877 aa3.11□□□□□ -1.91
RNU1-48P-201ENST00000516400 LCTP09848 1927 aa3.11□□□□□ -1.91
RNU1-48P-201ENST00000516400 MIA3Q5JRA6 1907 aa3.11□□□□□ -1.91
RNU1-48P-201ENST00000516400 SPTAN1Q13813 2472 aaKnown RBP3.11□□□□□ -1.91
RNU1-48P-201ENST00000516400 STXBP3O00186 592 aa3.11□□□□□ -1.91
RNU1-48P-201ENST00000516400 TBC1D12O60347 775 aa3.11□□□□□ -1.91
RNU1-48P-201ENST00000516400 C1QL1O75973 258 aa3.11□□□□□ -1.91
RNU1-48P-201ENST00000516400 CST5P28325 142 aaPredicted RBP3.11□□□□□ -1.91
RNU1-48P-201ENST00000516400 GTF2F1P35269 517 aaKnown RBP eCLIP3.11□□□□□ -1.91
RNU1-48P-201ENST00000516400 HMGCS2P54868 508 aa3.11□□□□□ -1.91
RNU1-48P-201ENST00000516400 AIMP1Q12904 312 aaKnown RBP3.11□□□□□ -1.91
RNU1-48P-201ENST00000516400 ADAM15Q13444 863 aa3.11□□□□□ -1.91
RNU1-48P-201ENST00000516400 SMAD4Q13485 552 aaKnown RBP3.11□□□□□ -1.91
RNU1-48P-201ENST00000516400 ANGPT1Q15389 498 aa3.11□□□□□ -1.91
RNU1-48P-201ENST00000516400 KCNA10Q16322 511 aa3.11□□□□□ -1.91
RNU1-48P-201ENST00000516400 PTPN21Q16825 1174 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms