RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 F5H6K3 240 aa16.26■□□□□ 0.19
TCOF1-215ENST00000515516 FCER1AP12319 257 aa16.26■□□□□ 0.19
TCOF1-215ENST00000515516 COPB2P35606 906 aa16.26■□□□□ 0.19
TCOF1-215ENST00000515516 KLRC3Q07444 240 aa16.26■□□□□ 0.19
TCOF1-215ENST00000515516 PPARAQ07869 468 aa16.26■□□□□ 0.19
TCOF1-215ENST00000515516 TMEM132BQ14DG7 1078 aa16.26■□□□□ 0.19
TCOF1-215ENST00000515516 ABRAQ8N0Z2 381 aa16.26■□□□□ 0.19
TCOF1-215ENST00000515516 NPLOC4Q8TAT6 608 aa16.26■□□□□ 0.19
TCOF1-215ENST00000515516 DIS3LQ8TF46 1054 aaKnown RBP16.26■□□□□ 0.19
TCOF1-215ENST00000515516 LNPKQ9C0E8 428 aa16.26■□□□□ 0.19
TCOF1-215ENST00000515516 PPP1R9AQ9ULJ8 1098 aa16.26■□□□□ 0.19
TCOF1-215ENST00000515516 BRCA2P51587 3418 aa16.25■□□□□ 0.19
TCOF1-215ENST00000515516 TRIM6-TRIM34B2RNG4 842 aa16.25■□□□□ 0.19
TCOF1-215ENST00000515516 VWA5AO00534 786 aa16.25■□□□□ 0.19
TCOF1-215ENST00000515516 MSCO60682 206 aa16.25■□□□□ 0.19
TCOF1-215ENST00000515516 TTLL1O95922 423 aa16.25■□□□□ 0.19
TCOF1-215ENST00000515516 STAT3P40763 770 aa16.25■□□□□ 0.19
TCOF1-215ENST00000515516 PPP4R3BQ5MIZ7 849 aa16.25■□□□□ 0.19
TCOF1-215ENST00000515516 B4GALNT3Q6L9W6 998 aa16.25■□□□□ 0.19
TCOF1-215ENST00000515516 CHRDL2Q6WN34 429 aa16.25■□□□□ 0.19
TCOF1-215ENST00000515516 SLF1Q9BQI6 1058 aa16.25■□□□□ 0.19
TCOF1-215ENST00000515516 HELLSQ9NRZ9 838 aa16.25■□□□□ 0.19
TCOF1-215ENST00000515516 FBXO28Q9NVF7 368 aa16.25■□□□□ 0.19
TCOF1-215ENST00000515516 FLRT1Q9NZU1 646 aa16.25■□□□□ 0.19
TCOF1-215ENST00000515516 NDUFB10O96000 172 aa16.24■□□□□ 0.19
TCOF1-215ENST00000515516 CYP2C19P33261 490 aa16.24■□□□□ 0.19
TCOF1-215ENST00000515516 TFAP4Q01664 338 aa16.24■□□□□ 0.19
TCOF1-215ENST00000515516 KCTD2Q14681 263 aa16.24■□□□□ 0.19
TCOF1-215ENST00000515516 OLFML2BQ68BL8 750 aa16.24■□□□□ 0.19
TCOF1-215ENST00000515516 CCDC129Q6ZRS4 1044 aa16.24■□□□□ 0.19
TCOF1-215ENST00000515516 TICAM2Q86XR7 235 aa16.24■□□□□ 0.19
TCOF1-215ENST00000515516 RIOX2Q8IUF8 465 aa16.24■□□□□ 0.19
TCOF1-215ENST00000515516 NEDD1Q8NHV4 660 aa16.24■□□□□ 0.19
TCOF1-215ENST00000515516 MKL1Q969V6 931 aa16.24■□□□□ 0.19
TCOF1-215ENST00000515516 CEP95Q96GE4 821 aa16.24■□□□□ 0.19
TCOF1-215ENST00000515516 MMP19Q99542 508 aa16.24■□□□□ 0.19
TCOF1-215ENST00000515516 NUP88Q99567 741 aaPredicted RBP16.24■□□□□ 0.19
TCOF1-215ENST00000515516 MTMR4Q9NYA4 1195 aa16.24■□□□□ 0.19
TCOF1-215ENST00000515516 ISY1Q9ULR0 285 aaKnown RBP16.24■□□□□ 0.19
TCOF1-215ENST00000515516 SYNPO2Q9UMS6 1093 aa16.24■□□□□ 0.19
TCOF1-215ENST00000515516 ADAMTS5Q9UNA0 930 aa16.24■□□□□ 0.19
TCOF1-215ENST00000515516 IGKV6D-41A0A0C4DH26 115 aa16.23■□□□□ 0.19
TCOF1-215ENST00000515516 ZBED4O75132 1171 aa16.23■□□□□ 0.19
TCOF1-215ENST00000515516 FAM47AQ5JRC9 791 aa16.23■□□□□ 0.19
TCOF1-215ENST00000515516 LHX8Q68G74 356 aa16.23■□□□□ 0.19
TCOF1-215ENST00000515516 PRPF38AQ8NAV1 312 aaKnown RBP16.23■□□□□ 0.19
TCOF1-215ENST00000515516 RILPL2Q969X0 211 aa16.23■□□□□ 0.19
TCOF1-215ENST00000515516 DDX20Q9UHI6 824 aaKnown RBP16.23■□□□□ 0.19
TCOF1-215ENST00000515516 TSPY2A6NKD2 308 aa16.22■□□□□ 0.19
TCOF1-215ENST00000515516 COBLO75128 1261 aa16.22■□□□□ 0.19
TCOF1-215ENST00000515516 MCMDC2Q4G0Z9 681 aa16.22■□□□□ 0.19
TCOF1-215ENST00000515516 CHD1LQ86WJ1 897 aa16.22■□□□□ 0.19
TCOF1-215ENST00000515516 SMC5Q8IY18 1101 aa16.22■□□□□ 0.19
TCOF1-215ENST00000515516 C7orf61Q8IZ16 206 aa16.22■□□□□ 0.19
TCOF1-215ENST00000515516 EXOC6Q8TAG9 804 aa16.22■□□□□ 0.19
TCOF1-215ENST00000515516 KIFC2Q96AC6 838 aa16.22■□□□□ 0.19
TCOF1-215ENST00000515516 FEM1BQ9UK73 627 aa16.22■□□□□ 0.19
TCOF1-215ENST00000515516 MKI67P46013 3256 aaKnown RBP16.22■□□□□ 0.19
TCOF1-215ENST00000515516 BAZ2AQ9UIF9 1905 aaKnown RBP16.21■□□□□ 0.19
TCOF1-215ENST00000515516 SLC4A3P48751 1232 aa16.21■□□□□ 0.19
TCOF1-215ENST00000515516 SLFN13Q68D06 897 aa16.21■□□□□ 0.19
TCOF1-215ENST00000515516 LRRC47Q8N1G4 583 aaKnown RBP16.21■□□□□ 0.19
TCOF1-215ENST00000515516 GMCL1P1Q8NEA9 526 aa16.21■□□□□ 0.19
TCOF1-215ENST00000515516 TEX13BQ9BXU2 312 aa16.21■□□□□ 0.19
TCOF1-215ENST00000515516 MYH7P12883 1935 aa16.21■□□□□ 0.19
TCOF1-215ENST00000515516 DOCK3Q8IZD9 2030 aa16.21■□□□□ 0.18
TCOF1-215ENST00000515516 PLXNB2O15031 1838 aa16.2■□□□□ 0.18
TCOF1-215ENST00000515516 RANBP6O60518 1105 aaKnown RBP16.2■□□□□ 0.18
TCOF1-215ENST00000515516 BMP3P12645 472 aa16.2■□□□□ 0.18
TCOF1-215ENST00000515516 MNX1P50219 401 aaPredicted RBP16.2■□□□□ 0.18
TCOF1-215ENST00000515516 MFAP1P55081 439 aaKnown RBP16.2■□□□□ 0.18
TCOF1-215ENST00000515516 CTDSPL2Q05D32 466 aa16.2■□□□□ 0.18
TCOF1-215ENST00000515516 IKQ13123 557 aaPredicted RBP16.2■□□□□ 0.18
TCOF1-215ENST00000515516 SNRNP48Q6IEG0 339 aaKnown RBP16.2■□□□□ 0.18
TCOF1-215ENST00000515516 MAML3Q96JK9 1138 aa16.2■□□□□ 0.18
TCOF1-215ENST00000515516 TOMM22Q9NS69 142 aa16.2■□□□□ 0.18
TCOF1-215ENST00000515516 ZNF214Q9UL59 606 aaPredicted RBP16.2■□□□□ 0.18
TCOF1-215ENST00000515516 PLIN4Q96Q06 1357 aa16.19■□□□□ 0.18
TCOF1-215ENST00000515516 IGHDP01880 384 aa16.19■□□□□ 0.18
TCOF1-215ENST00000515516 PGK2P07205 417 aa16.19■□□□□ 0.18
TCOF1-215ENST00000515516 CYBAP13498 195 aa16.19■□□□□ 0.18
TCOF1-215ENST00000515516 NUCB1Q02818 461 aa16.19■□□□□ 0.18
TCOF1-215ENST00000515516 ALX1Q15699 326 aa16.19■□□□□ 0.18
TCOF1-215ENST00000515516 VPS53Q5VIR6 699 aa16.19■□□□□ 0.18
TCOF1-215ENST00000515516 CPXCR1Q8N123 301 aa16.19■□□□□ 0.18
TCOF1-215ENST00000515516 ARRDC4Q8NCT1 418 aa16.19■□□□□ 0.18
TCOF1-215ENST00000515516 TRPV1Q8NER1 839 aa16.19■□□□□ 0.18
TCOF1-215ENST00000515516 REPS2Q8NFH8 660 aa16.19■□□□□ 0.18
TCOF1-215ENST00000515516 CHURC1Q8WUH1 139 aa16.19■□□□□ 0.18
TCOF1-215ENST00000515516 DDX11Q96FC9 970 aa16.19■□□□□ 0.18
TCOF1-215ENST00000515516 FAM227BQ96M60 508 aa16.19■□□□□ 0.18
TCOF1-215ENST00000515516 RBM27Q9P2N5 1060 aaKnown RBP16.19■□□□□ 0.18
TCOF1-215ENST00000515516 ANAPC4Q9UJX5 808 aa16.19■□□□□ 0.18
TCOF1-215ENST00000515516 STX8Q9UNK0 236 aa16.19■□□□□ 0.18
TCOF1-215ENST00000515516 DIS3Q9Y2L1 958 aaKnown RBP16.19■□□□□ 0.18
TCOF1-215ENST00000515516 A0A0D9SFI3 127 aa16.18■□□□□ 0.18
TCOF1-215ENST00000515516 SEPT4O43236 478 aa16.18■□□□□ 0.18
TCOF1-215ENST00000515516 FDX1P10109 184 aa16.18■□□□□ 0.18
TCOF1-215ENST00000515516 SLC1A4P43007 532 aa16.18■□□□□ 0.18
TCOF1-215ENST00000515516 NMIQ13287 307 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms