RNA–Protein interactions for RNA: ENST00000514326.5

SEC31A-238, Transcript of SEC31 homolog A, COPII coat complex component, human

TSL 3

Gene SEC31A, Length 847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC31A-238	ENST00000514326	HIP1	O00291	1037 aa		18.66	■□□□□ 0.58
SEC31A-238	ENST00000514326	NMT2	O60551	498 aa		18.66	■□□□□ 0.58
SEC31A-238	ENST00000514326	MFAP1	P55081	439 aa	Known RBP	18.66	■□□□□ 0.58
SEC31A-238	ENST00000514326	PLS1	Q14651	629 aa		18.66	■□□□□ 0.58
SEC31A-238	ENST00000514326	TRIB2	Q92519	343 aa		18.66	■□□□□ 0.58
SEC31A-238	ENST00000514326	NBPF3	Q9H094	633 aa		18.66	■□□□□ 0.58
SEC31A-238	ENST00000514326	PLXNB2	O15031	1838 aa		18.65	■□□□□ 0.58
SEC31A-238	ENST00000514326	RLF	Q13129	1914 aa		18.65	■□□□□ 0.58
SEC31A-238	ENST00000514326	ORC4	O43929	436 aa		18.65	■□□□□ 0.58
SEC31A-238	ENST00000514326	RANBP6	O60518	1105 aa	Known RBP	18.65	■□□□□ 0.58
SEC31A-238	ENST00000514326	GJB1	P08034	283 aa		18.65	■□□□□ 0.58
SEC31A-238	ENST00000514326	FGR	P09769	529 aa		18.65	■□□□□ 0.58
SEC31A-238	ENST00000514326	PTPRE	P23469	700 aa		18.65	■□□□□ 0.58
SEC31A-238	ENST00000514326	TMEM132B	Q14DG7	1078 aa		18.65	■□□□□ 0.58
SEC31A-238	ENST00000514326	CCL14	Q16627	93 aa		18.65	■□□□□ 0.58
SEC31A-238	ENST00000514326	MB21D1	Q8N884	522 aa		18.65	■□□□□ 0.58
SEC31A-238	ENST00000514326	CHMP4C	Q96CF2	233 aa		18.65	■□□□□ 0.58
SEC31A-238	ENST00000514326	SHISA4	Q96DD7	197 aa		18.65	■□□□□ 0.58
SEC31A-238	ENST00000514326	IL25	Q9H293	177 aa		18.65	■□□□□ 0.58
SEC31A-238	ENST00000514326	IL17RB	Q9NRM6	502 aa		18.65	■□□□□ 0.58
SEC31A-238	ENST00000514326	TOMM22	Q9NS69	142 aa		18.65	■□□□□ 0.58
SEC31A-238	ENST00000514326	PPP1R9A	Q9ULJ8	1098 aa		18.65	■□□□□ 0.58
SEC31A-238	ENST00000514326	ZMYM6	O95789	1325 aa		18.65	■□□□□ 0.58
SEC31A-238	ENST00000514326	HMGCR	P04035	888 aa		18.64	■□□□□ 0.57
SEC31A-238	ENST00000514326	XRCC5	P13010	732 aa	Known RBP	18.64	■□□□□ 0.57
SEC31A-238	ENST00000514326	ERCC3	P19447	782 aa		18.64	■□□□□ 0.57
SEC31A-238	ENST00000514326	RGS2	P41220	211 aa		18.64	■□□□□ 0.57
SEC31A-238	ENST00000514326	MAP2K5	Q13163	448 aa		18.64	■□□□□ 0.57
SEC31A-238	ENST00000514326	RRP12	Q5JTH9	1297 aa	Known RBP	18.64	■□□□□ 0.57
SEC31A-238	ENST00000514326	NKX2-3	Q8TAU0	364 aa		18.64	■□□□□ 0.57
SEC31A-238	ENST00000514326	ADAMTS5	Q9UNA0	930 aa		18.64	■□□□□ 0.57
SEC31A-238	ENST00000514326	MKI67	P46013	3256 aa	Known RBP	18.64	■□□□□ 0.57
SEC31A-238	ENST00000514326	RBBP6	Q7Z6E9	1792 aa	Known RBP	18.63	■□□□□ 0.57
SEC31A-238	ENST00000514326	SLC15A5	A6NIM6	579 aa		18.63	■□□□□ 0.57
SEC31A-238	ENST00000514326	VWA5A	O00534	786 aa		18.63	■□□□□ 0.57
SEC31A-238	ENST00000514326	GJA8	P48165	433 aa		18.63	■□□□□ 0.57
SEC31A-238	ENST00000514326	SLFN13	Q68D06	897 aa		18.63	■□□□□ 0.57
SEC31A-238	ENST00000514326	NCAPG2	Q86XI2	1143 aa		18.63	■□□□□ 0.57
SEC31A-238	ENST00000514326	TBC1D10C	Q8IV04	446 aa		18.63	■□□□□ 0.57
SEC31A-238	ENST00000514326	GMCL1P1	Q8NEA9	526 aa		18.63	■□□□□ 0.57
SEC31A-238	ENST00000514326	STX8	Q9UNK0	236 aa		18.63	■□□□□ 0.57
SEC31A-238	ENST00000514326	IVNS1ABP	Q9Y6Y0	642 aa		18.63	■□□□□ 0.57
SEC31A-238	ENST00000514326	ZKSCAN1	P17029	563 aa	Predicted RBP	18.62	■□□□□ 0.57
SEC31A-238	ENST00000514326	GRB14	Q14449	540 aa		18.62	■□□□□ 0.57
SEC31A-238	ENST00000514326	SHCBP1	Q8NEM2	672 aa		18.62	■□□□□ 0.57
SEC31A-238	ENST00000514326	REPS2	Q8NFH8	660 aa		18.62	■□□□□ 0.57
SEC31A-238	ENST00000514326	U2AF1L4	Q8WU68	220 aa	Known RBP	18.62	■□□□□ 0.57
SEC31A-238	ENST00000514326	DEFB118	Q96PH6	123 aa		18.62	■□□□□ 0.57
SEC31A-238	ENST00000514326	APBA2	Q99767	749 aa		18.62	■□□□□ 0.57
SEC31A-238	ENST00000514326	SLF1	Q9BQI6	1058 aa		18.62	■□□□□ 0.57
SEC31A-238	ENST00000514326	SYNPO2	Q9UMS6	1093 aa		18.62	■□□□□ 0.57
SEC31A-238	ENST00000514326		A0A0G2JMZ2	1700 aa		18.61	■□□□□ 0.57
SEC31A-238	ENST00000514326	SGPL1	O95470	568 aa		18.61	■□□□□ 0.57
SEC31A-238	ENST00000514326	AKNAD1	Q5T1N1	836 aa		18.61	■□□□□ 0.57
SEC31A-238	ENST00000514326	SKAP1	Q86WV1	359 aa		18.61	■□□□□ 0.57
SEC31A-238	ENST00000514326	NPLOC4	Q8TAT6	608 aa		18.61	■□□□□ 0.57
SEC31A-238	ENST00000514326	STAG1	Q8WVM7	1258 aa		18.61	■□□□□ 0.57
SEC31A-238	ENST00000514326	KIFC2	Q96AC6	838 aa		18.61	■□□□□ 0.57
SEC31A-238	ENST00000514326	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	18.61	■□□□□ 0.57
SEC31A-238	ENST00000514326	PAK6	Q9NQU5	681 aa	Predicted RBP	18.61	■□□□□ 0.57
SEC31A-238	ENST00000514326	FLRT1	Q9NZU1	646 aa		18.61	■□□□□ 0.57
SEC31A-238	ENST00000514326	ZNF214	Q9UL59	606 aa	Predicted RBP	18.61	■□□□□ 0.57
SEC31A-238	ENST00000514326	ZNF213	O14771	459 aa		18.6	■□□□□ 0.57
SEC31A-238	ENST00000514326	BMP3	P12645	472 aa		18.6	■□□□□ 0.57
SEC31A-238	ENST00000514326	MCC	P23508	829 aa		18.6	■□□□□ 0.57
SEC31A-238	ENST00000514326	CHML	P26374	656 aa		18.6	■□□□□ 0.57
SEC31A-238	ENST00000514326	ADORA2A	P29274	412 aa		18.6	■□□□□ 0.57
SEC31A-238	ENST00000514326	STAT3	P40763	770 aa		18.6	■□□□□ 0.57
SEC31A-238	ENST00000514326	MFSD6	Q6ZSS7	791 aa		18.6	■□□□□ 0.57
SEC31A-238	ENST00000514326	RASGRP2	Q7LDG7	609 aa		18.6	■□□□□ 0.57
SEC31A-238	ENST00000514326	TRMT44	Q8IYL2	757 aa	Known RBP	18.6	■□□□□ 0.57
SEC31A-238	ENST00000514326	PRPF38A	Q8NAV1	312 aa	Known RBP	18.6	■□□□□ 0.57
SEC31A-238	ENST00000514326	DSCC1	Q9BVC3	393 aa		18.6	■□□□□ 0.57
SEC31A-238	ENST00000514326	MROH8	Q9H579	483 aa		18.6	■□□□□ 0.57
SEC31A-238	ENST00000514326	HMX1	Q9NP08	348 aa	Predicted RBP	18.6	■□□□□ 0.57
SEC31A-238	ENST00000514326	ISY1	Q9ULR0	285 aa	Known RBP	18.6	■□□□□ 0.57
SEC31A-238	ENST00000514326	NEDD4	P46934	1319 aa		18.59	■□□□□ 0.57
SEC31A-238	ENST00000514326	RPTOR	Q8N122	1335 aa		18.59	■□□□□ 0.57
SEC31A-238	ENST00000514326	TFRC	P02786	760 aa	Known RBP	18.59	■□□□□ 0.57
SEC31A-238	ENST00000514326	HOXC6	P09630	235 aa		18.59	■□□□□ 0.57
SEC31A-238	ENST00000514326	PRKAR2A	P13861	404 aa	Known RBP	18.59	■□□□□ 0.57
SEC31A-238	ENST00000514326	NOV	P48745	357 aa		18.59	■□□□□ 0.57
SEC31A-238	ENST00000514326	CACNB2	Q08289	660 aa	Predicted RBP	18.59	■□□□□ 0.57
SEC31A-238	ENST00000514326	PPP4R3B	Q5MIZ7	849 aa		18.59	■□□□□ 0.57
SEC31A-238	ENST00000514326	MAP3K21	Q5TCX8	1036 aa		18.59	■□□□□ 0.57
SEC31A-238	ENST00000514326	RIOX2	Q8IUF8	465 aa		18.59	■□□□□ 0.57
SEC31A-238	ENST00000514326	GMCL1	Q96IK5	515 aa		18.59	■□□□□ 0.57
SEC31A-238	ENST00000514326	FEM1B	Q9UK73	627 aa		18.59	■□□□□ 0.57
SEC31A-238	ENST00000514326	MTMR7	Q9Y216	660 aa		18.59	■□□□□ 0.57
SEC31A-238	ENST00000514326	TMEM232	C9JQI7	657 aa		18.58	■□□□□ 0.56
SEC31A-238	ENST00000514326	STRN	O43815	780 aa		18.58	■□□□□ 0.56
SEC31A-238	ENST00000514326	COBL	O75128	1261 aa		18.58	■□□□□ 0.56
SEC31A-238	ENST00000514326	SLC25A27	O95847	323 aa		18.58	■□□□□ 0.56
SEC31A-238	ENST00000514326	SLC1A4	P43007	532 aa		18.58	■□□□□ 0.56
SEC31A-238	ENST00000514326	DPP9	Q86TI2	863 aa		18.58	■□□□□ 0.56
SEC31A-238	ENST00000514326	MYH4	Q9Y623	1939 aa		18.58	■□□□□ 0.56
SEC31A-238	ENST00000514326	PARP14	Q460N5	1801 aa		18.58	■□□□□ 0.56
SEC31A-238	ENST00000514326	ZBED4	O75132	1171 aa		18.57	■□□□□ 0.56
SEC31A-238	ENST00000514326	CCND3	P30281	292 aa	Predicted RBP	18.57	■□□□□ 0.56
SEC31A-238	ENST00000514326	SLC4A3	P48751	1232 aa		18.57	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms