RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 TRIB2Q92519 343 aa10.4□□□□□ -0.74
HERC4-214ENST00000513996 ATG4CQ96DT6 458 aa10.4□□□□□ -0.74
HERC4-214ENST00000513996 CEP95Q96GE4 821 aa10.4□□□□□ -0.74
HERC4-214ENST00000513996 NUP88Q99567 741 aaPredicted RBP10.4□□□□□ -0.74
HERC4-214ENST00000513996 NUDT12Q9BQG2 462 aa10.4□□□□□ -0.74
HERC4-214ENST00000513996 MOV10L1Q9BXT6 1211 aaKnown RBP10.4□□□□□ -0.74
HERC4-214ENST00000513996 MTMR4Q9NYA4 1195 aa10.4□□□□□ -0.74
HERC4-214ENST00000513996 CLIP2Q9UDT6 1046 aa10.4□□□□□ -0.74
HERC4-214ENST00000513996 CIZ1Q9ULV3 898 aaPredicted RBP10.4□□□□□ -0.74
HERC4-214ENST00000513996 ADAMTS5Q9UNA0 930 aa10.4□□□□□ -0.74
HERC4-214ENST00000513996 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.4□□□□□ -0.74
HERC4-214ENST00000513996 RLFQ13129 1914 aa10.4□□□□□ -0.74
HERC4-214ENST00000513996 F5H6K3 240 aa10.39□□□□□ -0.75
HERC4-214ENST00000513996 GABBR2O75899 941 aa10.39□□□□□ -0.75
HERC4-214ENST00000513996 FLOT1O75955 427 aa10.39□□□□□ -0.75
HERC4-214ENST00000513996 HSPD1P10809 573 aaKnown RBP10.39□□□□□ -0.75
HERC4-214ENST00000513996 XRCC5P13010 732 aaKnown RBP10.39□□□□□ -0.75
HERC4-214ENST00000513996 PTPREP23469 700 aa10.39□□□□□ -0.75
HERC4-214ENST00000513996 TFAP4Q01664 338 aa10.39□□□□□ -0.75
HERC4-214ENST00000513996 KLRC3Q07444 240 aa10.39□□□□□ -0.75
HERC4-214ENST00000513996 GSE1Q14687 1217 aa10.39□□□□□ -0.75
HERC4-214ENST00000513996 TMEM132BQ14DG7 1078 aa10.39□□□□□ -0.75
HERC4-214ENST00000513996 FAM83BQ5T0W9 1011 aa10.39□□□□□ -0.75
HERC4-214ENST00000513996 UBE2Q1Q7Z7E8 422 aa10.39□□□□□ -0.75
HERC4-214ENST00000513996 TICAM2Q86XR7 235 aa10.39□□□□□ -0.75
HERC4-214ENST00000513996 ZNF579Q8NAF0 562 aaKnown RBP10.39□□□□□ -0.75
HERC4-214ENST00000513996 NPLOC4Q8TAT6 608 aa10.39□□□□□ -0.75
HERC4-214ENST00000513996 U2AF1L4Q8WU68 220 aaKnown RBP10.39□□□□□ -0.75
HERC4-214ENST00000513996 MKL1Q969V6 931 aa10.39□□□□□ -0.75
HERC4-214ENST00000513996 SPATC1LQ9H0A9 340 aa10.39□□□□□ -0.75
HERC4-214ENST00000513996 SH2D4AQ9H788 454 aa10.39□□□□□ -0.75
HERC4-214ENST00000513996 ANAPC4Q9UJX5 808 aa10.39□□□□□ -0.75
HERC4-214ENST00000513996 PDE4DIPQ5VU43 2346 aa10.39□□□□□ -0.75
HERC4-214ENST00000513996 MYH8P13535 1937 aa10.39□□□□□ -0.75
HERC4-214ENST00000513996 GREB1LQ9C091 1923 aaPredicted RBP10.39□□□□□ -0.75
HERC4-214ENST00000513996 RAD21O60216 631 aa10.38□□□□□ -0.75
HERC4-214ENST00000513996 NMT2O60551 498 aa10.38□□□□□ -0.75
HERC4-214ENST00000513996 SGPL1O95470 568 aa10.38□□□□□ -0.75
HERC4-214ENST00000513996 NDUFB10O96000 172 aa10.38□□□□□ -0.75
HERC4-214ENST00000513996 HMGCRP04035 888 aa10.38□□□□□ -0.75
HERC4-214ENST00000513996 FGRP09769 529 aa10.38□□□□□ -0.75
HERC4-214ENST00000513996 CCNA1P78396 465 aa10.38□□□□□ -0.75
HERC4-214ENST00000513996 PDE4BQ07343 736 aa10.38□□□□□ -0.75
HERC4-214ENST00000513996 MAP2K5Q13163 448 aa10.38□□□□□ -0.75
HERC4-214ENST00000513996 MAP3K21Q5TCX8 1036 aa10.38□□□□□ -0.75
HERC4-214ENST00000513996 WDR78Q5VTH9 848 aa10.38□□□□□ -0.75
HERC4-214ENST00000513996 CCAR1Q8IX12 1150 aaKnown RBP10.38□□□□□ -0.75
HERC4-214ENST00000513996 REPS2Q8NFH8 660 aa10.38□□□□□ -0.75
HERC4-214ENST00000513996 FAM212AQ96EL1 285 aa10.38□□□□□ -0.75
HERC4-214ENST00000513996 DEFB118Q96PH6 123 aa10.38□□□□□ -0.75
HERC4-214ENST00000513996 IL25Q9H293 177 aa10.38□□□□□ -0.75
HERC4-214ENST00000513996 GOPCQ9HD26 462 aa10.38□□□□□ -0.75
HERC4-214ENST00000513996 PAK6Q9NQU5 681 aaPredicted RBP10.38□□□□□ -0.75
HERC4-214ENST00000513996 IL17RBQ9NRM6 502 aa10.38□□□□□ -0.75
HERC4-214ENST00000513996 FLRT1Q9NZU1 646 aa10.38□□□□□ -0.75
HERC4-214ENST00000513996 RBBP6Q7Z6E9 1792 aaKnown RBP10.38□□□□□ -0.75
HERC4-214ENST00000513996 CCDC171Q6TFL3 1326 aa10.37□□□□□ -0.75
HERC4-214ENST00000513996 SLC15A5A6NIM6 579 aa10.37□□□□□ -0.75
HERC4-214ENST00000513996 VWA5AO00534 786 aa10.37□□□□□ -0.75
HERC4-214ENST00000513996 COBLO75128 1261 aa10.37□□□□□ -0.75
HERC4-214ENST00000513996 IGHA2P01877 340 aa10.37□□□□□ -0.75
HERC4-214ENST00000513996 TSPY3P0CV98 308 aa10.37□□□□□ -0.75
HERC4-214ENST00000513996 TSPY8P0CW00 308 aa10.37□□□□□ -0.75
HERC4-214ENST00000513996 GSPT1P15170 499 aaKnown RBP10.37□□□□□ -0.75
HERC4-214ENST00000513996 ERCC3P19447 782 aa10.37□□□□□ -0.75
HERC4-214ENST00000513996 HAND2P61296 217 aa10.37□□□□□ -0.75
HERC4-214ENST00000513996 CACNB2Q08289 660 aaPredicted RBP10.37□□□□□ -0.75
HERC4-214ENST00000513996 GRB14Q14449 540 aa10.37□□□□□ -0.75
HERC4-214ENST00000513996 CWC27Q6UX04 472 aaKnown RBP10.37□□□□□ -0.75
HERC4-214ENST00000513996 LRRC47Q8N1G4 583 aaKnown RBP10.37□□□□□ -0.75
HERC4-214ENST00000513996 MB21D1Q8N884 522 aa10.37□□□□□ -0.75
HERC4-214ENST00000513996 SOCS4Q8WXH5 440 aa10.37□□□□□ -0.75
HERC4-214ENST00000513996 NBPF3Q9H094 633 aa10.37□□□□□ -0.75
HERC4-214ENST00000513996 CRISPLD2Q9H0B8 497 aa10.37□□□□□ -0.75
HERC4-214ENST00000513996 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.37□□□□□ -0.75
HERC4-214ENST00000513996 ZNF287Q9HBT7 754 aa10.37□□□□□ -0.75
HERC4-214ENST00000513996 PPP1R9AQ9ULJ8 1098 aa10.37□□□□□ -0.75
HERC4-214ENST00000513996 PLIN4Q96Q06 1357 aa10.37□□□□□ -0.75
HERC4-214ENST00000513996 RPTORQ8N122 1335 aa10.36□□□□□ -0.75
HERC4-214ENST00000513996 TTLL1O95922 423 aa10.36□□□□□ -0.75
HERC4-214ENST00000513996 SLC3A2P08195 630 aaKnown RBP10.36□□□□□ -0.75
HERC4-214ENST00000513996 HOXC6P09630 235 aa10.36□□□□□ -0.75
HERC4-214ENST00000513996 RGS2P41220 211 aa10.36□□□□□ -0.75
HERC4-214ENST00000513996 NOVP48745 357 aa10.36□□□□□ -0.75
HERC4-214ENST00000513996 PLS1Q14651 629 aa10.36□□□□□ -0.75
HERC4-214ENST00000513996 TTC22Q5TAA0 569 aa10.36□□□□□ -0.75
HERC4-214ENST00000513996 SHCBP1Q8NEM2 672 aa10.36□□□□□ -0.75
HERC4-214ENST00000513996 CHMP4CQ96CF2 233 aa10.36□□□□□ -0.75
HERC4-214ENST00000513996 APBA2Q99767 749 aa10.36□□□□□ -0.75
HERC4-214ENST00000513996 STRNO43815 780 aa10.35□□□□□ -0.75
HERC4-214ENST00000513996 ORC4O43929 436 aa10.35□□□□□ -0.75
HERC4-214ENST00000513996 RANBP6O60518 1105 aaKnown RBP10.35□□□□□ -0.75
HERC4-214ENST00000513996 TFRCP02786 760 aaKnown RBP10.35□□□□□ -0.75
HERC4-214ENST00000513996 ZKSCAN1P17029 563 aaPredicted RBP10.35□□□□□ -0.75
HERC4-214ENST00000513996 ADORA2AP29274 412 aa10.35□□□□□ -0.75
HERC4-214ENST00000513996 CCND3P30281 292 aaPredicted RBP10.35□□□□□ -0.75
HERC4-214ENST00000513996 STAT3P40763 770 aa10.35□□□□□ -0.75
HERC4-214ENST00000513996 SLFN13Q68D06 897 aa10.35□□□□□ -0.75
HERC4-214ENST00000513996 RASGRP2Q7LDG7 609 aa10.35□□□□□ -0.75
HERC4-214ENST00000513996 NCAPG2Q86XI2 1143 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms