RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 BRF1Q92994 677 aa11.86□□□□□ -0.51
NEDD9-214ENST00000513989 OTUD5Q96G74 571 aa11.86□□□□□ -0.51
NEDD9-214ENST00000513989 ZSCAN31Q96LW9 406 aaPredicted RBP11.86□□□□□ -0.51
NEDD9-214ENST00000513989 TCEANC2Q96MN5 208 aa11.86□□□□□ -0.51
NEDD9-214ENST00000513989 KIAA1683Q9H0B3 1180 aa11.86□□□□□ -0.51
NEDD9-214ENST00000513989 LY9Q9HBG7 655 aa11.86□□□□□ -0.51
NEDD9-214ENST00000513989 LIMCH1Q9UPQ0 1083 aa11.86□□□□□ -0.51
NEDD9-214ENST00000513989 PTPN22Q9Y2R2 807 aa11.86□□□□□ -0.51
NEDD9-214ENST00000513989 AFG3L2Q9Y4W6 797 aa11.86□□□□□ -0.51
NEDD9-214ENST00000513989 RANBP2P49792 3224 aaKnown RBP11.86□□□□□ -0.51
NEDD9-214ENST00000513989 CCL15-CCL14A0A0B4J2E2 113 aa11.85□□□□□ -0.51
NEDD9-214ENST00000513989 F5H6K3 240 aa11.85□□□□□ -0.51
NEDD9-214ENST00000513989 ZBTB43O43298 467 aa11.85□□□□□ -0.51
NEDD9-214ENST00000513989 DHX16O60231 1041 aaKnown RBP11.85□□□□□ -0.51
NEDD9-214ENST00000513989 KIF5BP33176 963 aa11.85□□□□□ -0.51
NEDD9-214ENST00000513989 GNAQP50148 359 aa11.85□□□□□ -0.51
NEDD9-214ENST00000513989 KLRC3Q07444 240 aa11.85□□□□□ -0.51
NEDD9-214ENST00000513989 CCL15Q16663 113 aa11.85□□□□□ -0.51
NEDD9-214ENST00000513989 SLFN13Q68D06 897 aa11.85□□□□□ -0.51
NEDD9-214ENST00000513989 SIAH1Q8IUQ4 282 aa11.85□□□□□ -0.51
NEDD9-214ENST00000513989 GMCL1P1Q8NEA9 526 aa11.85□□□□□ -0.51
NEDD9-214ENST00000513989 ZNF274Q96GC6 653 aaPredicted RBP11.85□□□□□ -0.51
NEDD9-214ENST00000513989 MAP3K14Q99558 947 aa11.85□□□□□ -0.51
NEDD9-214ENST00000513989 AGXT2Q9BYV1 514 aa11.85□□□□□ -0.51
NEDD9-214ENST00000513989 SZT2Q5T011 3432 aa11.85□□□□□ -0.51
NEDD9-214ENST00000513989 KLF18A0A0U1RQI7 1052 aa11.84□□□□□ -0.51
NEDD9-214ENST00000513989 IRF6O14896 467 aa11.84□□□□□ -0.51
NEDD9-214ENST00000513989 DDAH1O94760 285 aa11.84□□□□□ -0.51
NEDD9-214ENST00000513989 CETPP11597 493 aa11.84□□□□□ -0.51
NEDD9-214ENST00000513989 SLC1A4P43007 532 aa11.84□□□□□ -0.51
NEDD9-214ENST00000513989 RCAN1P53805 252 aa11.84□□□□□ -0.51
NEDD9-214ENST00000513989 AK2P54819 239 aa11.84□□□□□ -0.51
NEDD9-214ENST00000513989 EVCP57679 992 aa11.84□□□□□ -0.51
NEDD9-214ENST00000513989 SP3Q02447 781 aa11.84□□□□□ -0.51
NEDD9-214ENST00000513989 PABPC4Q13310 644 aaKnown RBP eCLIP11.84□□□□□ -0.51
NEDD9-214ENST00000513989 MTMR2Q13614 643 aa11.84□□□□□ -0.51
NEDD9-214ENST00000513989 BECN1Q14457 450 aa11.84□□□□□ -0.51
NEDD9-214ENST00000513989 SHROOM1Q2M3G4 852 aaPredicted RBP11.84□□□□□ -0.51
NEDD9-214ENST00000513989 PRPF38BQ5VTL8 546 aaKnown RBP11.84□□□□□ -0.51
NEDD9-214ENST00000513989 RCSD1Q6JBY9 416 aa11.84□□□□□ -0.51
NEDD9-214ENST00000513989 CPLX2Q6PUV4 134 aaKnown RBP11.84□□□□□ -0.51
NEDD9-214ENST00000513989 ZNF654Q8IZM8 581 aa11.84□□□□□ -0.51
NEDD9-214ENST00000513989 CTCFLQ8NI51 663 aaPredicted RBP11.84□□□□□ -0.51
NEDD9-214ENST00000513989 ACER1Q8TDN7 264 aa11.84□□□□□ -0.51
NEDD9-214ENST00000513989 NUP133Q8WUM0 1156 aa11.84□□□□□ -0.51
NEDD9-214ENST00000513989 DCAF4Q8WV16 495 aa11.84□□□□□ -0.51
NEDD9-214ENST00000513989 ARMC5Q96C12 935 aa11.84□□□□□ -0.51
NEDD9-214ENST00000513989 ERO1AQ96HE7 468 aa11.84□□□□□ -0.51
NEDD9-214ENST00000513989 LZTS2Q9BRK4 669 aa11.84□□□□□ -0.51
NEDD9-214ENST00000513989 VCPKMTQ9H867 229 aa11.84□□□□□ -0.51
NEDD9-214ENST00000513989 SH2B1Q9NRF2 756 aaPredicted RBP11.84□□□□□ -0.51
NEDD9-214ENST00000513989 ISY1Q9ULR0 285 aaKnown RBP11.84□□□□□ -0.51
NEDD9-214ENST00000513989 SIPA1L1O43166 1804 aa11.83□□□□□ -0.51
NEDD9-214ENST00000513989 FOCADQ5VW36 1801 aa11.83□□□□□ -0.51
NEDD9-214ENST00000513989 TRIOBPQ9H2D6 2365 aa11.83□□□□□ -0.52
NEDD9-214ENST00000513989 A0A1W2PRG0 241 aa11.83□□□□□ -0.52
NEDD9-214ENST00000513989 PARP1P09874 1014 aaKnown RBP11.83□□□□□ -0.52
NEDD9-214ENST00000513989 APOBRQ0VD83 1088 aa11.83□□□□□ -0.52
NEDD9-214ENST00000513989 TOB2Q14106 344 aaPredicted RBP11.83□□□□□ -0.52
NEDD9-214ENST00000513989 TAF1CQ15572 869 aaPredicted RBP11.83□□□□□ -0.52
NEDD9-214ENST00000513989 GPATCH4Q5T3I0 446 aaKnown RBP11.83□□□□□ -0.52
NEDD9-214ENST00000513989 OTUD7BQ6GQQ9 843 aa11.83□□□□□ -0.52
NEDD9-214ENST00000513989 HSCBQ8IWL3 235 aa11.83□□□□□ -0.52
NEDD9-214ENST00000513989 LRRC47Q8N1G4 583 aaKnown RBP11.83□□□□□ -0.52
NEDD9-214ENST00000513989 FANCBQ8NB91 859 aa11.83□□□□□ -0.52
NEDD9-214ENST00000513989 NKX2-3Q8TAU0 364 aa11.83□□□□□ -0.52
NEDD9-214ENST00000513989 CHURC1Q8WUH1 139 aa11.83□□□□□ -0.52
NEDD9-214ENST00000513989 GMCL1Q96IK5 515 aa11.83□□□□□ -0.52
NEDD9-214ENST00000513989 ARHGAP39Q9C0H5 1083 aa11.83□□□□□ -0.52
NEDD9-214ENST00000513989 SLKQ9H2G2 1235 aaPredicted RBP11.83□□□□□ -0.52
NEDD9-214ENST00000513989 EFCC1Q9HA90 598 aa11.83□□□□□ -0.52
NEDD9-214ENST00000513989 GPHNQ9NQX3 736 aaPredicted RBP11.83□□□□□ -0.52
NEDD9-214ENST00000513989 RBM28Q9NW13 759 aaKnown RBP11.83□□□□□ -0.52
NEDD9-214ENST00000513989 DAXXQ9UER7 740 aaPredicted RBP11.83□□□□□ -0.52
NEDD9-214ENST00000513989 KCNH4Q9UQ05 1017 aa11.83□□□□□ -0.52
NEDD9-214ENST00000513989 MTMR7Q9Y216 660 aa11.83□□□□□ -0.52
NEDD9-214ENST00000513989 NAV1Q8NEY1 1877 aa11.83□□□□□ -0.52
NEDD9-214ENST00000513989 A0A0G2JLL6 359 aaPredicted RBP11.82□□□□□ -0.52
NEDD9-214ENST00000513989 GOLGA8BA8MQT2 603 aa11.82□□□□□ -0.52
NEDD9-214ENST00000513989 BTBD19C9JJ37 291 aa11.82□□□□□ -0.52
NEDD9-214ENST00000513989 CPLX1O14810 134 aa11.82□□□□□ -0.52
NEDD9-214ENST00000513989 WDR46O15213 610 aaKnown RBP11.82□□□□□ -0.52
NEDD9-214ENST00000513989 BMP3P12645 472 aa11.82□□□□□ -0.52
NEDD9-214ENST00000513989 PDIA3P30101 505 aaKnown RBP11.82□□□□□ -0.52
NEDD9-214ENST00000513989 ANP32AP39687 249 aaKnown RBP11.82□□□□□ -0.52
NEDD9-214ENST00000513989 METAP2P50579 478 aaKnown RBP eCLIP11.82□□□□□ -0.52
NEDD9-214ENST00000513989 HMGCS2P54868 508 aa11.82□□□□□ -0.52
NEDD9-214ENST00000513989 MOGSQ13724 837 aa11.82□□□□□ -0.52
NEDD9-214ENST00000513989 ZYXQ15942 572 aaKnown RBP11.82□□□□□ -0.52
NEDD9-214ENST00000513989 RTN1Q16799 776 aa11.82□□□□□ -0.52
NEDD9-214ENST00000513989 CCDC96Q2M329 555 aa11.82□□□□□ -0.52
NEDD9-214ENST00000513989 ASPRV1Q53RT3 343 aa11.82□□□□□ -0.52
NEDD9-214ENST00000513989 SH3D19Q5HYK7 790 aa11.82□□□□□ -0.52
NEDD9-214ENST00000513989 PRRT2Q7Z6L0 340 aaPredicted RBP11.82□□□□□ -0.52
NEDD9-214ENST00000513989 CCDC84Q86UT8 332 aaPredicted RBP11.82□□□□□ -0.52
NEDD9-214ENST00000513989 CLEC10AQ8IUN9 316 aa11.82□□□□□ -0.52
NEDD9-214ENST00000513989 PROCA1Q8NCQ7 364 aaPredicted RBP11.82□□□□□ -0.52
NEDD9-214ENST00000513989 SNX21Q969T3 373 aa11.82□□□□□ -0.52
NEDD9-214ENST00000513989 HOXC10Q9NYD6 342 aa11.82□□□□□ -0.52
NEDD9-214ENST00000513989 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms