RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 SPATC1LQ9H0A9 340 aa11□□□□□ -0.65
CAST-239ENST00000513666 EHD4Q9H223 541 aa11□□□□□ -0.65
CAST-239ENST00000513666 XPNPEP3Q9NQH7 507 aa11□□□□□ -0.65
CAST-239ENST00000513666 TMEM39AQ9NV64 488 aa11□□□□□ -0.65
CAST-239ENST00000513666 NRBP1Q9UHY1 535 aa11□□□□□ -0.65
CAST-239ENST00000513666 SERPINB13Q9UIV8 391 aa11□□□□□ -0.65
CAST-239ENST00000513666 PLXNA1Q9UIW2 1896 aa11□□□□□ -0.65
CAST-239ENST00000513666 RARBP10826 455 aa10.99□□□□□ -0.65
CAST-239ENST00000513666 DYNLL1P63167 89 aaKnown RBP10.99□□□□□ -0.65
CAST-239ENST00000513666 FAAP100Q0VG06 881 aa10.99□□□□□ -0.65
CAST-239ENST00000513666 CERKLQ49MI3 558 aaPredicted RBP10.99□□□□□ -0.65
CAST-239ENST00000513666 ANKRD33Q7Z3H0 272 aa10.99□□□□□ -0.65
CAST-239ENST00000513666 RNF180Q86T96 592 aa10.99□□□□□ -0.65
CAST-239ENST00000513666 MAML3Q96JK9 1138 aa10.99□□□□□ -0.65
CAST-239ENST00000513666 TOX2Q96NM4 488 aa10.99□□□□□ -0.65
CAST-239ENST00000513666 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.99□□□□□ -0.65
CAST-239ENST00000513666 PRDM12Q9H4Q4 367 aa10.99□□□□□ -0.65
CAST-239ENST00000513666 MROH8Q9H579 483 aa10.99□□□□□ -0.65
CAST-239ENST00000513666 SNRKQ9NRH2 765 aa10.99□□□□□ -0.65
CAST-239ENST00000513666 HOXC10Q9NYD6 342 aa10.99□□□□□ -0.65
CAST-239ENST00000513666 ROBO3Q96MS0 1386 aa10.99□□□□□ -0.65
CAST-239ENST00000513666 ZNFX1Q9P2E3 1918 aaKnown RBP10.99□□□□□ -0.65
CAST-239ENST00000513666 E9PSI1 815 aa10.99□□□□□ -0.65
CAST-239ENST00000513666 CYP2E1P05181 493 aaPredicted RBP10.99□□□□□ -0.65
CAST-239ENST00000513666 GUCY1A2P33402 732 aa10.99□□□□□ -0.65
CAST-239ENST00000513666 MB21D1Q8N884 522 aa10.99□□□□□ -0.65
CAST-239ENST00000513666 SLC44A5Q8NCS7 719 aa10.99□□□□□ -0.65
CAST-239ENST00000513666 IL27Q8NEV9 243 aa10.99□□□□□ -0.65
CAST-239ENST00000513666 C1QTNF1Q9BXJ1 281 aa10.99□□□□□ -0.65
CAST-239ENST00000513666 PBX4Q9BYU1 374 aa10.99□□□□□ -0.65
CAST-239ENST00000513666 API5Q9BZZ5 524 aaKnown RBP10.99□□□□□ -0.65
CAST-239ENST00000513666 CABP5Q9NP86 173 aa10.99□□□□□ -0.65
CAST-239ENST00000513666 DCDC2CA8MYV0 355 aa10.98□□□□□ -0.65
CAST-239ENST00000513666 PGK1P00558 417 aa10.98□□□□□ -0.65
CAST-239ENST00000513666 TIMP1P01033 207 aa10.98□□□□□ -0.65
CAST-239ENST00000513666 PBX2P40425 430 aa10.98□□□□□ -0.65
CAST-239ENST00000513666 ADGRE1Q14246 886 aa10.98□□□□□ -0.65
CAST-239ENST00000513666 TTC39AQ5SRH9 613 aa10.98□□□□□ -0.65
CAST-239ENST00000513666 RASIP1Q5U651 963 aa10.98□□□□□ -0.65
CAST-239ENST00000513666 CCDC174Q6PII3 467 aa10.98□□□□□ -0.65
CAST-239ENST00000513666 CCDC129Q6ZRS4 1044 aa10.98□□□□□ -0.65
CAST-239ENST00000513666 CERS3Q8IU89 383 aa10.98□□□□□ -0.65
CAST-239ENST00000513666 TSEN34Q9BSV6 310 aaKnown RBP10.98□□□□□ -0.65
CAST-239ENST00000513666 TANGO6Q9C0B7 1094 aa10.98□□□□□ -0.65
CAST-239ENST00000513666 NOB1Q9ULX3 412 aaKnown RBP10.98□□□□□ -0.65
CAST-239ENST00000513666 GRXCR1A8MXD5 290 aa10.97□□□□□ -0.65
CAST-239ENST00000513666 GNAI3P08754 354 aa10.97□□□□□ -0.65
CAST-239ENST00000513666 CYP7A1P22680 504 aa10.97□□□□□ -0.65
CAST-239ENST00000513666 SHMT1P34896 483 aa10.97□□□□□ -0.65
CAST-239ENST00000513666 USP5P45974 858 aa10.97□□□□□ -0.65
CAST-239ENST00000513666 PPIGQ13427 754 aaKnown RBP eCLIP10.97□□□□□ -0.654e-6■□□□□ 11
CAST-239ENST00000513666 CCDC85BQ15834 202 aaPredicted RBP10.97□□□□□ -0.65
CAST-239ENST00000513666 TMEM240Q5SV17 173 aa10.97□□□□□ -0.65
CAST-239ENST00000513666 MFSD5Q6N075 450 aa10.97□□□□□ -0.65
CAST-239ENST00000513666 C16orf59Q7L2K0 433 aa10.97□□□□□ -0.65
CAST-239ENST00000513666 TTC6Q86TZ1 520 aa10.97□□□□□ -0.65
CAST-239ENST00000513666 NCAPG2Q86XI2 1143 aa10.97□□□□□ -0.65
CAST-239ENST00000513666 FAM9BQ8IZU0 186 aa10.97□□□□□ -0.65
CAST-239ENST00000513666 TBX21Q9UL17 535 aa10.97□□□□□ -0.65
CAST-239ENST00000513666 ARIH1Q9Y4X5 557 aaPredicted RBP10.97□□□□□ -0.65
CAST-239ENST00000513666 SYNGAP1Q96PV0 1343 aa10.97□□□□□ -0.65
CAST-239ENST00000513666 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.96□□□□□ -0.65
CAST-239ENST00000513666 A0A1W2PRG0 241 aa10.96□□□□□ -0.65
CAST-239ENST00000513666 ADAMTS4O75173 837 aa10.96□□□□□ -0.65
CAST-239ENST00000513666 FCER1AP12319 257 aa10.96□□□□□ -0.65
CAST-239ENST00000513666 SLFN5Q08AF3 891 aa10.96□□□□□ -0.65
CAST-239ENST00000513666 G3BP1Q13283 466 aaKnown RBP eCLIP10.96□□□□□ -0.65
CAST-239ENST00000513666 PLS1Q14651 629 aa10.96□□□□□ -0.65
CAST-239ENST00000513666 SEPT2Q15019 361 aa10.96□□□□□ -0.65
CAST-239ENST00000513666 CCDC158Q5M9N0 1113 aa10.96□□□□□ -0.65
CAST-239ENST00000513666 EFCAB3Q8N7B9 438 aa10.96□□□□□ -0.65
CAST-239ENST00000513666 NUP133Q8WUM0 1156 aa10.96□□□□□ -0.65
CAST-239ENST00000513666 ZFP91Q96JP5 570 aaPredicted RBP10.96□□□□□ -0.65
CAST-239ENST00000513666 TINF2Q9BSI4 451 aa10.96□□□□□ -0.65
CAST-239ENST00000513666 PIH1D3Q9NQM4 214 aaKnown RBP10.96□□□□□ -0.65
CAST-239ENST00000513666 STARD7Q9NQZ5 370 aa10.96□□□□□ -0.65
CAST-239ENST00000513666 PARP14Q460N5 1801 aa10.96□□□□□ -0.66
CAST-239ENST00000513666 TCF20Q9UGU0 1960 aaKnown RBP10.96□□□□□ -0.66
CAST-239ENST00000513666 ZNF865P0CJ78 1059 aaPredicted RBP10.95□□□□□ -0.66
CAST-239ENST00000513666 AKR1A1P14550 325 aa10.95□□□□□ -0.66
CAST-239ENST00000513666 TAL1P17542 331 aaPredicted RBP10.95□□□□□ -0.66
CAST-239ENST00000513666 IGFBP4P22692 258 aa10.95□□□□□ -0.66
CAST-239ENST00000513666 ZAP70P43403 619 aa10.95□□□□□ -0.66
CAST-239ENST00000513666 ACLYP53396 1101 aa10.95□□□□□ -0.66
CAST-239ENST00000513666 RAB30Q15771 203 aa10.95□□□□□ -0.66
CAST-239ENST00000513666 MIGA1Q8NAN2 632 aa10.95□□□□□ -0.66
CAST-239ENST00000513666 ZNF512BQ96KM6 892 aaPredicted RBP10.95□□□□□ -0.66
CAST-239ENST00000513666 DBNDD2Q9BQY9 259 aa10.95□□□□□ -0.66
CAST-239ENST00000513666 GPR108Q9NPR9 543 aa10.95□□□□□ -0.66
CAST-239ENST00000513666 CXXC1Q9P0U4 656 aaPredicted RBP10.95□□□□□ -0.66
CAST-239ENST00000513666 MOXD2PA6NHM9 499 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 ANP32CO43423 234 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 SLC25A27O95847 323 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 BMP1P13497 986 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 PLCD1P51178 756 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 TNNI3KQ59H18 835 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 KIAA1755Q5JYT7 1200 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 PSRC1Q6PGN9 363 aaPredicted RBP10.94□□□□□ -0.66
CAST-239ENST00000513666 GBF1Q92538 1859 aa10.94□□□□□ -0.66
CAST-239ENST00000513666 LENG1Q96BZ8 264 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms