RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 CHGBP05060 677 aa11.8□□□□□ -0.52
CCL28-203ENST00000513525 CYP2D6P10635 497 aa11.8□□□□□ -0.52
CCL28-203ENST00000513525 XRCC5P13010 732 aaKnown RBP11.8□□□□□ -0.52
CCL28-203ENST00000513525 Q3C1V9 767 aa11.8□□□□□ -0.52
CCL28-203ENST00000513525 ADGRD1Q6QNK2 874 aa11.8□□□□□ -0.52
CCL28-203ENST00000513525 AMOTL1Q8IY63 956 aa11.8□□□□□ -0.52
CCL28-203ENST00000513525 KBTBD3Q8NAB2 608 aa11.8□□□□□ -0.52
CCL28-203ENST00000513525 CCDC17Q96LX7 622 aa11.8□□□□□ -0.52
CCL28-203ENST00000513525 NUDT12Q9BQG2 462 aa11.8□□□□□ -0.52
CCL28-203ENST00000513525 PAGR1Q9BTK6 254 aa11.8□□□□□ -0.52
CCL28-203ENST00000513525 CRISPLD2Q9H0B8 497 aa11.8□□□□□ -0.52
CCL28-203ENST00000513525 PUS7LQ9H0K6 701 aaKnown RBP11.8□□□□□ -0.52
CCL28-203ENST00000513525 PORCNQ9H237 461 aa11.8□□□□□ -0.52
CCL28-203ENST00000513525 MPHOSPH10O00566 681 aaKnown RBP11.79□□□□□ -0.52
CCL28-203ENST00000513525 PEX10O60683 326 aa11.79□□□□□ -0.52
CCL28-203ENST00000513525 CNMDO75829 334 aa11.79□□□□□ -0.52
CCL28-203ENST00000513525 C16orf86Q6ZW13 317 aa11.79□□□□□ -0.52
CCL28-203ENST00000513525 GPR142Q7Z601 462 aa11.79□□□□□ -0.52
CCL28-203ENST00000513525 SLC44A5Q8NCS7 719 aa11.79□□□□□ -0.52
CCL28-203ENST00000513525 USP6NLQ92738 828 aa11.79□□□□□ -0.52
CCL28-203ENST00000513525 DYNLL2Q96FJ2 89 aa11.79□□□□□ -0.52
CCL28-203ENST00000513525 DDRGK1Q96HY6 314 aa11.79□□□□□ -0.52
CCL28-203ENST00000513525 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.79□□□□□ -0.52
CCL28-203ENST00000513525 SLC4A4Q9Y6R1 1079 aa11.79□□□□□ -0.52
CCL28-203ENST00000513525 TTC41PQ6P2S7 1318 aa11.79□□□□□ -0.52
CCL28-203ENST00000513525 RPTORQ8N122 1335 aa11.79□□□□□ -0.52
CCL28-203ENST00000513525 A0A1W2PRG0 241 aa11.78□□□□□ -0.52
CCL28-203ENST00000513525 SPDYE16A6NNV3 312 aaPredicted RBP11.78□□□□□ -0.52
CCL28-203ENST00000513525 USP17L12C9JPN9 530 aa11.78□□□□□ -0.52
CCL28-203ENST00000513525 USP17L21D6R901 530 aa11.78□□□□□ -0.52
CCL28-203ENST00000513525 ARHGAP33O14559 1287 aa11.78□□□□□ -0.52
CCL28-203ENST00000513525 FARP2O94887 1054 aaPredicted RBP11.78□□□□□ -0.52
CCL28-203ENST00000513525 CDK8P49336 464 aa11.78□□□□□ -0.52
CCL28-203ENST00000513525 CCNA1P78396 465 aa11.78□□□□□ -0.52
CCL28-203ENST00000513525 MORN1Q5T089 497 aa11.78□□□□□ -0.52
CCL28-203ENST00000513525 PLEKHH3Q7Z736 793 aa11.78□□□□□ -0.52
CCL28-203ENST00000513525 TRMT44Q8IYL2 757 aaKnown RBP11.78□□□□□ -0.52
CCL28-203ENST00000513525 TRIB2Q92519 343 aa11.78□□□□□ -0.52
CCL28-203ENST00000513525 DEFB118Q96PH6 123 aa11.78□□□□□ -0.52
CCL28-203ENST00000513525 HTATIP2Q9BUP3 242 aa11.78□□□□□ -0.52
CCL28-203ENST00000513525 RPAP3Q9H6T3 665 aaPredicted RBP11.78□□□□□ -0.52
CCL28-203ENST00000513525 ARPP21Q9UBL0 812 aaPredicted RBP11.78□□□□□ -0.52
CCL28-203ENST00000513525 ROBO3Q96MS0 1386 aa11.78□□□□□ -0.52
CCL28-203ENST00000513525 CYP2D7A0A087X1C5 515 aa11.77□□□□□ -0.52
CCL28-203ENST00000513525 ZFYP08048 801 aaPredicted RBP11.77□□□□□ -0.52
CCL28-203ENST00000513525 CYP2B6P20813 491 aa11.77□□□□□ -0.52
CCL28-203ENST00000513525 MAP3K21Q5TCX8 1036 aa11.77□□□□□ -0.52
CCL28-203ENST00000513525 GIMAP6Q6P9H5 292 aa11.77□□□□□ -0.52
CCL28-203ENST00000513525 CTR9Q6PD62 1173 aa11.77□□□□□ -0.52
CCL28-203ENST00000513525 CHD1LQ86WJ1 897 aa11.77□□□□□ -0.52
CCL28-203ENST00000513525 CCAR1Q8IX12 1150 aaKnown RBP11.77□□□□□ -0.52
CCL28-203ENST00000513525 ANKLE1Q8NAG6 615 aa11.77□□□□□ -0.52
CCL28-203ENST00000513525 TMC2Q8TDI7 906 aa11.77□□□□□ -0.52
CCL28-203ENST00000513525 APPBP2Q92624 585 aa11.77□□□□□ -0.52
CCL28-203ENST00000513525 LPAR1Q92633 364 aa11.77□□□□□ -0.52
CCL28-203ENST00000513525 STRBPQ96SI9 672 aaKnown RBP11.77□□□□□ -0.52
CCL28-203ENST00000513525 SH2D4AQ9H788 454 aa11.77□□□□□ -0.52
CCL28-203ENST00000513525 ARHGEF10LQ9HCE6 1279 aa11.77□□□□□ -0.52
CCL28-203ENST00000513525 HMX1Q9NP08 348 aaPredicted RBP11.77□□□□□ -0.52
CCL28-203ENST00000513525 TMX2Q9Y320 296 aa11.77□□□□□ -0.52
CCL28-203ENST00000513525 TRIOBPQ9H2D6 2365 aa11.77□□□□□ -0.53
CCL28-203ENST00000513525 SMIM22K7EJ46 135 aa11.76□□□□□ -0.53
CCL28-203ENST00000513525 ERC2O15083 957 aa11.76□□□□□ -0.53
CCL28-203ENST00000513525 AKR1B1P15121 316 aa11.76□□□□□ -0.53
CCL28-203ENST00000513525 RGS2P41220 211 aa11.76□□□□□ -0.53
CCL28-203ENST00000513525 ICA1Q05084 483 aa11.76□□□□□ -0.53
CCL28-203ENST00000513525 SBK1Q52WX2 424 aa11.76□□□□□ -0.53
CCL28-203ENST00000513525 SIAH1Q8IUQ4 282 aa11.76□□□□□ -0.53
CCL28-203ENST00000513525 OSBP2Q969R2 916 aa11.76□□□□□ -0.53
CCL28-203ENST00000513525 APBA2Q99767 749 aa11.76□□□□□ -0.53
CCL28-203ENST00000513525 BTBD7Q9P203 1132 aa11.76□□□□□ -0.53
CCL28-203ENST00000513525 STK24Q9Y6E0 443 aa11.76□□□□□ -0.53
CCL28-203ENST00000513525 SMCHD1A6NHR9 2005 aa11.76□□□□□ -0.53
CCL28-203ENST00000513525 GSG1L2A8MUP6 293 aa11.76□□□□□ -0.53
CCL28-203ENST00000513525 RNF113AO15541 343 aaKnown RBP11.76□□□□□ -0.53
CCL28-203ENST00000513525 GLRX3O76003 335 aaKnown RBP11.76□□□□□ -0.53
CCL28-203ENST00000513525 TFRCP02786 760 aaKnown RBP11.76□□□□□ -0.53
CCL28-203ENST00000513525 TRIM32Q13049 653 aa11.76□□□□□ -0.53
CCL28-203ENST00000513525 MAP2K5Q13163 448 aa11.76□□□□□ -0.53
CCL28-203ENST00000513525 COG2Q14746 738 aa11.76□□□□□ -0.53
CCL28-203ENST00000513525 LRRFIP1Q32MZ4 808 aaKnown RBP11.76□□□□□ -0.53
CCL28-203ENST00000513525 HABP4Q5JVS0 413 aaKnown RBP11.76□□□□□ -0.53
CCL28-203ENST00000513525 TSHZ3Q63HK5 1081 aa11.76□□□□□ -0.53
CCL28-203ENST00000513525 PI4K2BQ8TCG2 481 aa11.76□□□□□ -0.53
CCL28-203ENST00000513525 VCPKMTQ9H867 229 aa11.76□□□□□ -0.53
CCL28-203ENST00000513525 HOXC10Q9NYD6 342 aa11.76□□□□□ -0.53
CCL28-203ENST00000513525 SALL3Q9BXA9 1300 aa11.75□□□□□ -0.53
CCL28-203ENST00000513525 RANBP2P49792 3224 aaKnown RBP11.75□□□□□ -0.53
CCL28-203ENST00000513525 SLC15A5A6NIM6 579 aa11.75□□□□□ -0.53
CCL28-203ENST00000513525 H0YGN5 161 aa11.75□□□□□ -0.53
CCL28-203ENST00000513525 TK2O00142 265 aa11.75□□□□□ -0.53
CCL28-203ENST00000513525 WDR46O15213 610 aaKnown RBP11.75□□□□□ -0.53
CCL28-203ENST00000513525 GPAA1O43292 621 aa11.75□□□□□ -0.53
CCL28-203ENST00000513525 HOXC6P09630 235 aa11.75□□□□□ -0.53
CCL28-203ENST00000513525 ZKSCAN1P17029 563 aaPredicted RBP11.75□□□□□ -0.53
CCL28-203ENST00000513525 GNAT2P19087 354 aa11.75□□□□□ -0.53
CCL28-203ENST00000513525 PTPREP23469 700 aa11.75□□□□□ -0.53
CCL28-203ENST00000513525 GRB14Q14449 540 aa11.75□□□□□ -0.53
CCL28-203ENST00000513525 KIAA1755Q5JYT7 1200 aa11.75□□□□□ -0.53
CCL28-203ENST00000513525 CLEC10AQ8IUN9 316 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms