RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 MLLT1Q03111 559 aaPredicted RBP21■□□□□ 0.95
DDR1-272ENST00000513243 MFSD6Q6ZSS7 791 aa21■□□□□ 0.95
DDR1-272ENST00000513243 GMCL1P1Q8NEA9 526 aa21■□□□□ 0.95
DDR1-272ENST00000513243 NKX2-3Q8TAU0 364 aa21■□□□□ 0.95
DDR1-272ENST00000513243 NUDT12Q9BQG2 462 aa21■□□□□ 0.95
DDR1-272ENST00000513243 TMEM106CQ9BVX2 250 aa21■□□□□ 0.95
DDR1-272ENST00000513243 MOV10L1Q9BXT6 1211 aaKnown RBP21■□□□□ 0.95
DDR1-272ENST00000513243 SPATC1LQ9H0A9 340 aa21■□□□□ 0.95
DDR1-272ENST00000513243 PPP1R9AQ9ULJ8 1098 aa21■□□□□ 0.95
DDR1-272ENST00000513243 RAD50Q92878 1312 aa21■□□□□ 0.95
DDR1-272ENST00000513243 PCP11498 1178 aaKnown RBP20.99■□□□□ 0.95
DDR1-272ENST00000513243 CYP2B6P20813 491 aa20.99■□□□□ 0.95
DDR1-272ENST00000513243 NOVP48745 357 aa20.99■□□□□ 0.95
DDR1-272ENST00000513243 PPP4R3BQ5MIZ7 849 aa20.99■□□□□ 0.95
DDR1-272ENST00000513243 MORN1Q5T089 497 aa20.99■□□□□ 0.95
DDR1-272ENST00000513243 RUFY2Q8WXA3 655 aa20.99■□□□□ 0.95
DDR1-272ENST00000513243 SOCS4Q8WXH5 440 aa20.99■□□□□ 0.95
DDR1-272ENST00000513243 USP6NLQ92738 828 aa20.99■□□□□ 0.95
DDR1-272ENST00000513243 CCDC136Q96JN2 1154 aa20.99■□□□□ 0.95
DDR1-272ENST00000513243 STX8Q9UNK0 236 aa20.99■□□□□ 0.95
DDR1-272ENST00000513243 MYH4Q9Y623 1939 aa20.99■□□□□ 0.95
DDR1-272ENST00000513243 PLXNB2O15031 1838 aa20.99■□□□□ 0.95
DDR1-272ENST00000513243 A0A0G2JMZ2 1700 aa20.98■□□□□ 0.95
DDR1-272ENST00000513243 INHAP05111 366 aa20.98■□□□□ 0.95
DDR1-272ENST00000513243 UBXN2AP68543 259 aa20.98■□□□□ 0.95
DDR1-272ENST00000513243 TMEM132BQ14DG7 1078 aa20.98■□□□□ 0.95
DDR1-272ENST00000513243 WDR78Q5VTH9 848 aa20.98■□□□□ 0.95
DDR1-272ENST00000513243 SLFN13Q68D06 897 aa20.98■□□□□ 0.95
DDR1-272ENST00000513243 RNF41Q9H4P4 317 aaPredicted RBP20.98■□□□□ 0.95
DDR1-272ENST00000513243 CWC22Q9HCG8 908 aaKnown RBP20.98■□□□□ 0.95
DDR1-272ENST00000513243 CTNNA3Q9UI47 895 aa20.98■□□□□ 0.95
DDR1-272ENST00000513243 PARP14Q460N5 1801 aa20.97■□□□□ 0.95
DDR1-272ENST00000513243 VWA5AO00534 786 aa20.97■□□□□ 0.95
DDR1-272ENST00000513243 CCL5P13501 91 aa20.97■□□□□ 0.95
DDR1-272ENST00000513243 EN2P19622 333 aaPredicted RBP20.97■□□□□ 0.95
DDR1-272ENST00000513243 PLS1Q14651 629 aa20.97■□□□□ 0.95
DDR1-272ENST00000513243 SLF1Q9BQI6 1058 aa20.97■□□□□ 0.95
DDR1-272ENST00000513243 TCP11L1Q9NUJ3 509 aa20.97■□□□□ 0.95
DDR1-272ENST00000513243 NEDD4P46934 1319 aa20.97■□□□□ 0.95
DDR1-272ENST00000513243 KIAA0100Q14667 2235 aaKnown RBP20.96■□□□□ 0.95
DDR1-272ENST00000513243 SLC15A5A6NIM6 579 aa20.96■□□□□ 0.95
DDR1-272ENST00000513243 NEFLP07196 543 aa20.96■□□□□ 0.95
DDR1-272ENST00000513243 XRCC5P13010 732 aaKnown RBP20.96■□□□□ 0.95
DDR1-272ENST00000513243 ERCC3P19447 782 aa20.96■□□□□ 0.95
DDR1-272ENST00000513243 PTPREP23469 700 aa20.96■□□□□ 0.95
DDR1-272ENST00000513243 IMMTQ16891 758 aaKnown RBP20.96■□□□□ 0.95
DDR1-272ENST00000513243 SHCBP1Q8NEM2 672 aa20.96■□□□□ 0.95
DDR1-272ENST00000513243 REPS2Q8NFH8 660 aa20.96■□□□□ 0.95
DDR1-272ENST00000513243 SGSM2O43147 1006 aa20.95■□□□□ 0.94
DDR1-272ENST00000513243 BMP3P12645 472 aa20.95■□□□□ 0.94
DDR1-272ENST00000513243 MCCP23508 829 aa20.95■□□□□ 0.94
DDR1-272ENST00000513243 RGS2P41220 211 aa20.95■□□□□ 0.94
DDR1-272ENST00000513243 PTH1RQ03431 593 aa20.95■□□□□ 0.94
DDR1-272ENST00000513243 MAP2K5Q13163 448 aa20.95■□□□□ 0.94
DDR1-272ENST00000513243 PRPF38AQ8NAV1 312 aaKnown RBP20.95■□□□□ 0.94
DDR1-272ENST00000513243 TRIB2Q92519 343 aa20.95■□□□□ 0.94
DDR1-272ENST00000513243 CHMP4CQ96CF2 233 aa20.95■□□□□ 0.94
DDR1-272ENST00000513243 GMCL1Q96IK5 515 aa20.95■□□□□ 0.94
DDR1-272ENST00000513243 RNF208Q9H0X6 261 aa20.95■□□□□ 0.94
DDR1-272ENST00000513243 UNC93B1Q9H1C4 597 aa20.95■□□□□ 0.94
DDR1-272ENST00000513243 IVNS1ABPQ9Y6Y0 642 aa20.95■□□□□ 0.94
DDR1-272ENST00000513243 RBBP6Q7Z6E9 1792 aaKnown RBP20.95■□□□□ 0.94
DDR1-272ENST00000513243 HMGCRP04035 888 aa20.94■□□□□ 0.94
DDR1-272ENST00000513243 TRIM32Q13049 653 aa20.94■□□□□ 0.94
DDR1-272ENST00000513243 GRB14Q14449 540 aa20.94■□□□□ 0.94
DDR1-272ENST00000513243 ESR2Q92731 530 aa20.94■□□□□ 0.94
DDR1-272ENST00000513243 MROH8Q9H579 483 aa20.94■□□□□ 0.94
DDR1-272ENST00000513243 FEM1BQ9UK73 627 aa20.94■□□□□ 0.94
DDR1-272ENST00000513243 ZNF214Q9UL59 606 aaPredicted RBP20.94■□□□□ 0.94
DDR1-272ENST00000513243 LAMA4Q16363 1823 aa20.93■□□□□ 0.94
DDR1-272ENST00000513243 GJB1P08034 283 aa20.93■□□□□ 0.94
DDR1-272ENST00000513243 STAT3P40763 770 aa20.93■□□□□ 0.94
DDR1-272ENST00000513243 SLC1A4P43007 532 aa20.93■□□□□ 0.94
DDR1-272ENST00000513243 CCL14Q16627 93 aa20.93■□□□□ 0.94
DDR1-272ENST00000513243 BMP2KLQ5H9B9 411 aa20.93■□□□□ 0.94
DDR1-272ENST00000513243 RCSD1Q6JBY9 416 aa20.93■□□□□ 0.94
DDR1-272ENST00000513243 NCAPG2Q86XI2 1143 aa20.93■□□□□ 0.94
DDR1-272ENST00000513243 RIOX2Q8IUF8 465 aa20.93■□□□□ 0.94
DDR1-272ENST00000513243 KIFC2Q96AC6 838 aa20.93■□□□□ 0.94
DDR1-272ENST00000513243 APBA2Q99767 749 aa20.93■□□□□ 0.94
DDR1-272ENST00000513243 TMEM47Q9BQJ4 181 aa20.93■□□□□ 0.94
DDR1-272ENST00000513243 B4E1Z4 1266 aa20.92■□□□□ 0.94
DDR1-272ENST00000513243 TMEM232C9JQI7 657 aa20.92■□□□□ 0.94
DDR1-272ENST00000513243 STRNO43815 780 aa20.92■□□□□ 0.94
DDR1-272ENST00000513243 KDM4AO75164 1064 aa20.92■□□□□ 0.94
DDR1-272ENST00000513243 SLC25A27O95847 323 aa20.92■□□□□ 0.94
DDR1-272ENST00000513243 TOP1P11387 765 aaKnown RBP20.92■□□□□ 0.94
DDR1-272ENST00000513243 RASGRP2Q7LDG7 609 aa20.92■□□□□ 0.94
DDR1-272ENST00000513243 TTC14Q96N46 770 aa20.92■□□□□ 0.94
DDR1-272ENST00000513243 ZKSCAN3Q9BRR0 538 aa20.92■□□□□ 0.94
DDR1-272ENST00000513243 ISY1Q9ULR0 285 aaKnown RBP20.92■□□□□ 0.94
DDR1-272ENST00000513243 MTMR7Q9Y216 660 aa20.92■□□□□ 0.94
DDR1-272ENST00000513243 COL11A1P12107 1806 aaPredicted RBP20.92■□□□□ 0.94
DDR1-272ENST00000513243 HOXC6P09630 235 aa20.91■□□□□ 0.94
DDR1-272ENST00000513243 ZKSCAN1P17029 563 aaPredicted RBP20.91■□□□□ 0.94
DDR1-272ENST00000513243 NT5C2P49902 561 aa20.91■□□□□ 0.94
DDR1-272ENST00000513243 KCTD1Q719H9 257 aa20.91■□□□□ 0.94
DDR1-272ENST00000513243 TRMT44Q8IYL2 757 aaKnown RBP20.91■□□□□ 0.94
DDR1-272ENST00000513243 NPLOC4Q8TAT6 608 aa20.91■□□□□ 0.94
DDR1-272ENST00000513243 SLC38A10Q9HBR0 1119 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms