RNA–Protein interactions for RNA: ENST00000513101.1

ACSF2-223, Transcript of acyl-CoA synthetase family member 2, human

TSL 4

Gene ACSF2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSF2-223	ENST00000513101	RABGAP1	Q9Y3P9	1069 aa		10.31	□□□□□ -0.76
ACSF2-223	ENST00000513101	MYPN	Q86TC9	1320 aa		10.31	□□□□□ -0.76
ACSF2-223	ENST00000513101	HMGB1	P09429	215 aa	Known RBP	10.3	□□□□□ -0.76
ACSF2-223	ENST00000513101	HOXD10	P28358	340 aa		10.3	□□□□□ -0.76
ACSF2-223	ENST00000513101	DSG3	P32926	999 aa		10.3	□□□□□ -0.76
ACSF2-223	ENST00000513101	DDIT3	P35638	169 aa		10.3	□□□□□ -0.76
ACSF2-223	ENST00000513101	PSMC4	P43686	418 aa		10.3	□□□□□ -0.76
ACSF2-223	ENST00000513101	PRMT2	P55345	433 aa		10.3	□□□□□ -0.76
ACSF2-223	ENST00000513101	CCDC178	Q5BJE1	867 aa		10.3	□□□□□ -0.76
ACSF2-223	ENST00000513101	RRP12	Q5JTH9	1297 aa	Known RBP	10.3	□□□□□ -0.76
ACSF2-223	ENST00000513101	FBXO46	Q6PJ61	603 aa	Predicted RBP	10.3	□□□□□ -0.76
ACSF2-223	ENST00000513101	RUFY3	Q7L099	469 aa		10.3	□□□□□ -0.76
ACSF2-223	ENST00000513101	ANKRD13C	Q8N6S4	541 aa		10.3	□□□□□ -0.76
ACSF2-223	ENST00000513101	GMCL1P1	Q8NEA9	526 aa		10.3	□□□□□ -0.76
ACSF2-223	ENST00000513101	ABHD8	Q96I13	439 aa		10.3	□□□□□ -0.76
ACSF2-223	ENST00000513101	KRT23	Q9C075	422 aa		10.3	□□□□□ -0.76
ACSF2-223	ENST00000513101	TRIM17	Q9Y577	477 aa		10.3	□□□□□ -0.76
ACSF2-223	ENST00000513101	WDR19	Q8NEZ3	1342 aa		10.3	□□□□□ -0.76
ACSF2-223	ENST00000513101	SPDYE16	A6NNV3	312 aa	Predicted RBP	10.29	□□□□□ -0.76
ACSF2-223	ENST00000513101	NDUFB10	O96000	172 aa		10.29	□□□□□ -0.76
ACSF2-223	ENST00000513101	NEK4	P51957	841 aa		10.29	□□□□□ -0.76
ACSF2-223	ENST00000513101	CAP1	Q01518	475 aa		10.29	□□□□□ -0.76
ACSF2-223	ENST00000513101	CUL4A	Q13619	759 aa		10.29	□□□□□ -0.76
ACSF2-223	ENST00000513101	ADCK5	Q3MIX3	580 aa		10.29	□□□□□ -0.76
ACSF2-223	ENST00000513101	DGKH	Q86XP1	1220 aa		10.29	□□□□□ -0.76
ACSF2-223	ENST00000513101	SPICE1	Q8N0Z3	855 aa		10.29	□□□□□ -0.76
ACSF2-223	ENST00000513101	MB21D1	Q8N884	522 aa		10.29	□□□□□ -0.76
ACSF2-223	ENST00000513101	GPRC5A	Q8NFJ5	357 aa		10.29	□□□□□ -0.76
ACSF2-223	ENST00000513101	GMCL1	Q96IK5	515 aa		10.29	□□□□□ -0.76
ACSF2-223	ENST00000513101	TRIM47	Q96LD4	638 aa		10.29	□□□□□ -0.76
ACSF2-223	ENST00000513101	AGXT2	Q9BYV1	514 aa		10.29	□□□□□ -0.76
ACSF2-223	ENST00000513101	STX8	Q9UNK0	236 aa		10.29	□□□□□ -0.76
ACSF2-223	ENST00000513101	NEDD4	P46934	1319 aa		10.29	□□□□□ -0.76
ACSF2-223	ENST00000513101	ATAD5	Q96QE3	1844 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	NMT2	O60551	498 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	PLA2G6	O60733	806 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	FLOT1	O75955	427 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	FMNL1	O95466	1100 aa	Predicted RBP	10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	TOP1	P11387	765 aa	Known RBP	10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	RPS6KB1	P23443	525 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	CTGF	P29279	349 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	FCGRT	P55899	365 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	ERVK-9	P63128	1117 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	ERVK-24	P63145	666 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	TRDN	Q13061	729 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101		Q3C1V9	767 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	SLFN13	Q68D06	897 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	POTEE	Q6S8J3	1075 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	IQCA1	Q86XH1	822 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	ANKS1A	Q92625	1134 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	INTS4	Q96HW7	963 aa	Known RBP	10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	TANGO6	Q9C0B7	1094 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	ARHGAP39	Q9C0H5	1083 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	TXNRD2	Q9NNW7	524 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	ZSWIM5	Q9P217	1185 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	SRRD	Q9UH36	339 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	ADAMTS5	Q9UNA0	930 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	PTPN22	Q9Y2R2	807 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	CYP46A1	Q9Y6A2	500 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	TAF6L	Q9Y6J9	622 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	LOC285556	D6RIA3	1793 aa		10.28	□□□□□ -0.76
ACSF2-223	ENST00000513101	PTPRF	P10586	1907 aa		10.27	□□□□□ -0.76
ACSF2-223	ENST00000513101	CASP8AP2	Q9UKL3	1982 aa		10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101		B4E1Z4	1266 aa		10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	KDM4A	O75164	1064 aa		10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	CNMD	O75829	334 aa		10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	MYCN	P04198	464 aa	Predicted RBP	10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	BMP3	P12645	472 aa		10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	CAST	P20810	708 aa	Known RBP	10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	MAPK4	P31152	587 aa		10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	RGS19	P49795	217 aa		10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	EVC	P57679	992 aa		10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	CCNA1	P78396	465 aa		10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	EXOSC10	Q01780	885 aa	Known RBP	10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	ANKRD1	Q15327	319 aa		10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	FAM83B	Q5T0W9	1011 aa		10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	RCSD1	Q6JBY9	416 aa		10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	STOX1	Q6ZVD7	989 aa		10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	LRRC47	Q8N1G4	583 aa	Known RBP	10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	PRPF38A	Q8NAV1	312 aa	Known RBP	10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	NKX2-3	Q8TAU0	364 aa		10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	JAKMIP1	Q96N16	626 aa	Known RBP	10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	NEK1	Q96PY6	1258 aa		10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	TMEM47	Q9BQJ4	181 aa		10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	MTA3	Q9BTC8	594 aa		10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	PAGR1	Q9BTK6	254 aa		10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	DAXX	Q9UER7	740 aa	Predicted RBP	10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	FEM1B	Q9UK73	627 aa		10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101	PPP1R9A	Q9ULJ8	1098 aa		10.27	□□□□□ -0.77
ACSF2-223	ENST00000513101		E7EWF7	191 aa		10.26	□□□□□ -0.77
ACSF2-223	ENST00000513101	TNPO2	O14787	897 aa	Known RBP	10.26	□□□□□ -0.77
ACSF2-223	ENST00000513101	RAD21	O60216	631 aa		10.26	□□□□□ -0.77
ACSF2-223	ENST00000513101	FDX1	P10109	184 aa		10.26	□□□□□ -0.77
ACSF2-223	ENST00000513101	SLC1A4	P43007	532 aa		10.26	□□□□□ -0.77
ACSF2-223	ENST00000513101	BLOC1S2	Q6QNY1	142 aa		10.26	□□□□□ -0.77
ACSF2-223	ENST00000513101	DHX32	Q7L7V1	743 aa	Known RBP	10.26	□□□□□ -0.77
ACSF2-223	ENST00000513101	FAM160B2	Q86V87	743 aa		10.26	□□□□□ -0.77
ACSF2-223	ENST00000513101	NCOA7	Q8NI08	942 aa		10.26	□□□□□ -0.77
ACSF2-223	ENST00000513101	CHURC1	Q8WUH1	139 aa		10.26	□□□□□ -0.77
ACSF2-223	ENST00000513101	DCAF4	Q8WV16	495 aa		10.26	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms