RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 A0A1W2PRG0 241 aa17.44■□□□□ 0.38
LETM1-207ENST00000512669 USP17L12C9JPN9 530 aa17.44■□□□□ 0.38
LETM1-207ENST00000512669 USP17L21D6R901 530 aa17.44■□□□□ 0.38
LETM1-207ENST00000512669 FLOT1O75955 427 aa17.44■□□□□ 0.38
LETM1-207ENST00000512669 SLC25A27O95847 323 aa17.44■□□□□ 0.38
LETM1-207ENST00000512669 DSG3P32926 999 aa17.44■□□□□ 0.38
LETM1-207ENST00000512669 C12orf60Q5U649 245 aa17.44■□□□□ 0.38
LETM1-207ENST00000512669 ZSCAN25Q6NSZ9 544 aa17.44■□□□□ 0.38
LETM1-207ENST00000512669 SIAH1Q8IUQ4 282 aa17.44■□□□□ 0.38
LETM1-207ENST00000512669 SLC4A4Q9Y6R1 1079 aa17.44■□□□□ 0.38
LETM1-207ENST00000512669 TTC41PQ6P2S7 1318 aa17.44■□□□□ 0.38
LETM1-207ENST00000512669 RNF113AO15541 343 aaKnown RBP17.43■□□□□ 0.38
LETM1-207ENST00000512669 FCER1AP12319 257 aa17.43■□□□□ 0.38
LETM1-207ENST00000512669 CTR9Q6PD62 1173 aa17.43■□□□□ 0.38
LETM1-207ENST00000512669 NCAPG2Q86XI2 1143 aa17.43■□□□□ 0.38
LETM1-207ENST00000512669 AMOTL1Q8IY63 956 aa17.43■□□□□ 0.38
LETM1-207ENST00000512669 GPATCH3Q96I76 525 aa17.43■□□□□ 0.38
LETM1-207ENST00000512669 CCDC17Q96LX7 622 aa17.43■□□□□ 0.38
LETM1-207ENST00000512669 TMX2Q9Y320 296 aa17.43■□□□□ 0.38
LETM1-207ENST00000512669 UNC80Q8N2C7 3258 aa17.43■□□□□ 0.38
LETM1-207ENST00000512669 GSG1L2A8MUP6 293 aa17.42■□□□□ 0.38
LETM1-207ENST00000512669 WDR46O15213 610 aaKnown RBP17.42■□□□□ 0.38
LETM1-207ENST00000512669 COBLO75128 1261 aa17.42■□□□□ 0.38
LETM1-207ENST00000512669 COPB2P35606 906 aa17.42■□□□□ 0.38
LETM1-207ENST00000512669 SMAD3P84022 425 aaKnown RBP17.42■□□□□ 0.38
LETM1-207ENST00000512669 ICA1Q05084 483 aa17.42■□□□□ 0.38
LETM1-207ENST00000512669 PLS1Q14651 629 aa17.42■□□□□ 0.38
LETM1-207ENST00000512669 ANKRD45Q5TZF3 282 aa17.42■□□□□ 0.38
LETM1-207ENST00000512669 APPBP2Q92624 585 aa17.42■□□□□ 0.38
LETM1-207ENST00000512669 MAML3Q96JK9 1138 aa17.42■□□□□ 0.38
LETM1-207ENST00000512669 VCPKMTQ9H867 229 aa17.42■□□□□ 0.38
LETM1-207ENST00000512669 PRDM5Q9NQX1 630 aaPredicted RBP17.42■□□□□ 0.38
LETM1-207ENST00000512669 ROBO3Q96MS0 1386 aa17.41■□□□□ 0.38
LETM1-207ENST00000512669 M0R2C6 588 aa17.41■□□□□ 0.38
LETM1-207ENST00000512669 RARBP10826 455 aa17.41■□□□□ 0.38
LETM1-207ENST00000512669 AKR1B1P15121 316 aa17.41■□□□□ 0.38
LETM1-207ENST00000512669 CDK8P49336 464 aa17.41■□□□□ 0.38
LETM1-207ENST00000512669 LRRC41Q15345 812 aa17.41■□□□□ 0.38
LETM1-207ENST00000512669 TRIM60Q495X7 471 aa17.41■□□□□ 0.38
LETM1-207ENST00000512669 KIAA1755Q5JYT7 1200 aa17.41■□□□□ 0.38
LETM1-207ENST00000512669 CLEC10AQ8IUN9 316 aa17.41■□□□□ 0.38
LETM1-207ENST00000512669 EXOC6Q8TAG9 804 aa17.41■□□□□ 0.38
LETM1-207ENST00000512669 DDRGK1Q96HY6 314 aa17.41■□□□□ 0.38
LETM1-207ENST00000512669 COL25A1Q9BXS0 654 aaPredicted RBP17.41■□□□□ 0.38
LETM1-207ENST00000512669 PDLIM7Q9NR12 457 aa17.41■□□□□ 0.38
LETM1-207ENST00000512669 DNAH12Q6ZR08 3092 aa17.41■□□□□ 0.38
LETM1-207ENST00000512669 TMEM265A0A087WTH1 108 aa17.4■□□□□ 0.38
LETM1-207ENST00000512669 IGHDP01880 384 aa17.4■□□□□ 0.38
LETM1-207ENST00000512669 MX1P20591 662 aa17.4■□□□□ 0.38
LETM1-207ENST00000512669 SHHQ15465 462 aa17.4■□□□□ 0.38
LETM1-207ENST00000512669 C16orf86Q6ZW13 317 aa17.4■□□□□ 0.38
LETM1-207ENST00000512669 RNF180Q86T96 592 aa17.4■□□□□ 0.38
LETM1-207ENST00000512669 ATG4CQ96DT6 458 aa17.4■□□□□ 0.38
LETM1-207ENST00000512669 FAM161BQ96MY7 647 aa17.4■□□□□ 0.38
LETM1-207ENST00000512669 SEC62Q99442 399 aaKnown RBP17.4■□□□□ 0.38
LETM1-207ENST00000512669 PHF24Q9UPV7 400 aa17.4■□□□□ 0.38
LETM1-207ENST00000512669 DIS3Q9Y2L1 958 aaKnown RBP17.4■□□□□ 0.38
LETM1-207ENST00000512669 TACC3Q9Y6A5 838 aa17.4■□□□□ 0.38
LETM1-207ENST00000512669 PARP14Q460N5 1801 aa17.4■□□□□ 0.38
LETM1-207ENST00000512669 MYCNP04198 464 aaPredicted RBP17.39■□□□□ 0.37
LETM1-207ENST00000512669 ADCYAP1R1P41586 468 aa17.39■□□□□ 0.37
LETM1-207ENST00000512669 BADQ92934 168 aa17.39■□□□□ 0.37
LETM1-207ENST00000512669 EPB41L4AQ9HCS5 686 aaPredicted RBP17.39■□□□□ 0.37
LETM1-207ENST00000512669 XPNPEP3Q9NQH7 507 aa17.39■□□□□ 0.37
LETM1-207ENST00000512669 ZNFX1Q9P2E3 1918 aaKnown RBP17.39■□□□□ 0.37
LETM1-207ENST00000512669 ERC2O15083 957 aa17.38■□□□□ 0.37
LETM1-207ENST00000512669 GPAA1O43292 621 aa17.38■□□□□ 0.37
LETM1-207ENST00000512669 ZFYP08048 801 aaPredicted RBP17.38■□□□□ 0.37
LETM1-207ENST00000512669 KCTD2Q14681 263 aa17.38■□□□□ 0.37
LETM1-207ENST00000512669 SBK1Q52WX2 424 aa17.38■□□□□ 0.37
LETM1-207ENST00000512669 FAM47AQ5JRC9 791 aa17.38■□□□□ 0.37
LETM1-207ENST00000512669 ANO1Q5XXA6 986 aa17.38■□□□□ 0.37
LETM1-207ENST00000512669 RIOX2Q8IUF8 465 aa17.38■□□□□ 0.37
LETM1-207ENST00000512669 SPICE1Q8N0Z3 855 aa17.38■□□□□ 0.37
LETM1-207ENST00000512669 MMP19Q99542 508 aa17.38■□□□□ 0.37
LETM1-207ENST00000512669 CDX2Q99626 313 aaPredicted RBP17.38■□□□□ 0.37
LETM1-207ENST00000512669 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.38■□□□□ 0.37
LETM1-207ENST00000512669 SEMA6BQ9H3T3 888 aa17.38■□□□□ 0.37
LETM1-207ENST00000512669 KANSL2Q9H9L4 492 aa17.38■□□□□ 0.37
LETM1-207ENST00000512669 GOPCQ9HD26 462 aa17.38■□□□□ 0.37
LETM1-207ENST00000512669 ADAMTS5Q9UNA0 930 aa17.38■□□□□ 0.37
LETM1-207ENST00000512669 MYH7P12883 1935 aa17.38■□□□□ 0.37
LETM1-207ENST00000512669 BAZ2AQ9UIF9 1905 aaKnown RBP17.38■□□□□ 0.37
LETM1-207ENST00000512669 CLTBP09497 229 aa17.37■□□□□ 0.37
LETM1-207ENST00000512669 TMEM132BQ14DG7 1078 aa17.37■□□□□ 0.37
LETM1-207ENST00000512669 C9orf50Q5SZB4 431 aa17.37■□□□□ 0.37
LETM1-207ENST00000512669 SMC5Q8IY18 1101 aa17.37■□□□□ 0.37
LETM1-207ENST00000512669 MSL3Q8N5Y2 521 aaKnown RBP17.37■□□□□ 0.37
LETM1-207ENST00000512669 MAFAQ8NHW3 353 aaPredicted RBP17.37■□□□□ 0.37
LETM1-207ENST00000512669 TINF2Q9BSI4 451 aa17.37■□□□□ 0.37
LETM1-207ENST00000512669 SUPT16HQ9Y5B9 1047 aaKnown RBP17.37■□□□□ 0.37
LETM1-207ENST00000512669 PLXNA1Q9UIW2 1896 aa17.36■□□□□ 0.37
LETM1-207ENST00000512669 TRIM43BA6NCK2 446 aa17.36■□□□□ 0.37
LETM1-207ENST00000512669 FOXP2O15409 715 aa17.36■□□□□ 0.37
LETM1-207ENST00000512669 AKR1A1P14550 325 aa17.36■□□□□ 0.37
LETM1-207ENST00000512669 PDE1AP54750 535 aa17.36■□□□□ 0.37
LETM1-207ENST00000512669 AAMPQ13685 434 aa17.36■□□□□ 0.37
LETM1-207ENST00000512669 ZMYM1Q5SVZ6 1142 aa17.36■□□□□ 0.37
LETM1-207ENST00000512669 PRAMEF19Q5SWL8 479 aa17.36■□□□□ 0.37
LETM1-207ENST00000512669 GIMAP6Q6P9H5 292 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms