RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 DPF2Q92785 391 aa13.44□□□□□ -0.26
PRDM16-207ENST00000512462 CRACR2AQ9BSW2 395 aa13.44□□□□□ -0.26
PRDM16-207ENST00000512462 FAM207AQ9NSI2 230 aaPredicted RBP13.44□□□□□ -0.26
PRDM16-207ENST00000512462 NOP2P46087 812 aaKnown RBP13.44□□□□□ -0.26
PRDM16-207ENST00000512462 TSGA10IPQ3SY00 556 aa13.44□□□□□ -0.26
PRDM16-207ENST00000512462 WWC2Q6AWC2 1192 aa13.44□□□□□ -0.26
PRDM16-207ENST00000512462 QTRT2Q9H974 415 aaKnown RBP13.44□□□□□ -0.26
PRDM16-207ENST00000512462 SLC39A2Q9NP94 309 aa13.44□□□□□ -0.26
PRDM16-207ENST00000512462 HOMER2Q9NSB8 354 aa13.44□□□□□ -0.26
PRDM16-207ENST00000512462 GNA11P29992 359 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 SLC1A4P43007 532 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 EVCP57679 992 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.43□□□□□ -0.26
PRDM16-207ENST00000512462 ADGRA1Q86SQ6 560 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 CPXCR1Q8N123 301 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 SNX29Q8TEQ0 813 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 DCP1AQ9NPI6 582 aaPredicted RBP13.43□□□□□ -0.26
PRDM16-207ENST00000512462 TUBGCP6Q96RT7 1819 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 COL18A1P39060 1754 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 A0A1W2PQ27 194 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 A0A1W2PQ64 194 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 A0A1W2PQD8 194 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 BMP15O95972 392 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 SEPT12Q8IYM1 358 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 ZNF34Q8IZ26 560 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 LRWD1Q9UFC0 647 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 MAN1B1Q9UKM7 699 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 TRAF5O00463 557 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 PAK1Q13153 545 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 TMEM132AQ24JP5 1023 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 ANKRD13CQ8N6S4 541 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 IGDCC4Q8TDY8 1250 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 EPC1Q9H2F5 836 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 NLRC4Q9NPP4 1024 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 BSDC1Q9NW68 430 aaPredicted RBP13.43□□□□□ -0.26
PRDM16-207ENST00000512462 ARPP21Q9UBL0 812 aaPredicted RBP13.43□□□□□ -0.26
PRDM16-207ENST00000512462 LUC7L2Q9Y383 392 aaKnown RBP13.43□□□□□ -0.26
PRDM16-207ENST00000512462 CRYBG1Q9Y4K1 1723 aa13.43□□□□□ -0.26
PRDM16-207ENST00000512462 CLRN2A0PK11 232 aa13.42□□□□□ -0.26
PRDM16-207ENST00000512462 KIF20AO95235 890 aa13.42□□□□□ -0.26
PRDM16-207ENST00000512462 GDF11O95390 407 aa13.42□□□□□ -0.26
PRDM16-207ENST00000512462 LIFRP42702 1097 aa13.42□□□□□ -0.26
PRDM16-207ENST00000512462 RASGRP2Q7LDG7 609 aa13.42□□□□□ -0.26
PRDM16-207ENST00000512462 REXO1Q8N1G1 1221 aaKnown RBP13.42□□□□□ -0.26
PRDM16-207ENST00000512462 MLKLQ8NB16 471 aa13.42□□□□□ -0.26
PRDM16-207ENST00000512462 PIGSQ96S52 555 aa13.42□□□□□ -0.26
PRDM16-207ENST00000512462 TSG101Q99816 390 aa13.42□□□□□ -0.26
PRDM16-207ENST00000512462 GDAQ9Y2T3 454 aa13.42□□□□□ -0.26
PRDM16-207ENST00000512462 SORBS3O60504 671 aa13.42□□□□□ -0.26
PRDM16-207ENST00000512462 AMPD3Q01432 767 aa13.42□□□□□ -0.26
PRDM16-207ENST00000512462 PRPF4BQ13523 1007 aaKnown RBP13.42□□□□□ -0.26
PRDM16-207ENST00000512462 NONOQ15233 471 aaKnown RBP eCLIP13.42□□□□□ -0.26
PRDM16-207ENST00000512462 LRRC41Q15345 812 aa13.42□□□□□ -0.26
PRDM16-207ENST00000512462 CTR9Q6PD62 1173 aa13.42□□□□□ -0.26
PRDM16-207ENST00000512462 MRFAP1L1Q96HT8 127 aa13.42□□□□□ -0.26
PRDM16-207ENST00000512462 MROH7-TTC4A0A0A0MT08 1334 aa13.42□□□□□ -0.26
PRDM16-207ENST00000512462 CYP4A11Q02928 519 aa13.42□□□□□ -0.26
PRDM16-207ENST00000512462 SPECC1LQ69YQ0 1117 aa13.42□□□□□ -0.26
PRDM16-207ENST00000512462 CABP7Q86V35 215 aa13.42□□□□□ -0.26
PRDM16-207ENST00000512462 TMCO5BA8MYB1 307 aa13.41□□□□□ -0.26
PRDM16-207ENST00000512462 CFBP00751 764 aa13.41□□□□□ -0.26
PRDM16-207ENST00000512462 UBE2SQ16763 222 aa13.41□□□□□ -0.26
PRDM16-207ENST00000512462 DCAF17Q5H9S7 520 aaPredicted RBP13.41□□□□□ -0.26
PRDM16-207ENST00000512462 CUL5Q93034 780 aa13.41□□□□□ -0.26
PRDM16-207ENST00000512462 NOC4LQ9BVI4 516 aaKnown RBP13.41□□□□□ -0.26
PRDM16-207ENST00000512462 RMND1Q9NWS8 449 aa13.41□□□□□ -0.26
PRDM16-207ENST00000512462 CDHR2Q9BYE9 1310 aa13.41□□□□□ -0.26
PRDM16-207ENST00000512462 INTS5Q6P9B9 1019 aaKnown RBP13.41□□□□□ -0.26
PRDM16-207ENST00000512462 CCDC94Q9BW85 323 aaPredicted RBP13.41□□□□□ -0.26
PRDM16-207ENST00000512462 SPDYE3A6NKU9 549 aa13.41□□□□□ -0.26
PRDM16-207ENST00000512462 CASP14P31944 242 aa13.41□□□□□ -0.26
PRDM16-207ENST00000512462 TERF1P54274 439 aa13.41□□□□□ -0.26
PRDM16-207ENST00000512462 OGFOD1Q8N543 542 aa13.41□□□□□ -0.26
PRDM16-207ENST00000512462 SPAG5Q96R06 1193 aa13.41□□□□□ -0.26
PRDM16-207ENST00000512462 RNF26Q9BY78 433 aaPredicted RBP13.41□□□□□ -0.26
PRDM16-207ENST00000512462 RABEP2Q9H5N1 569 aa13.41□□□□□ -0.26
PRDM16-207ENST00000512462 TRIM49BA6NDI0 452 aa13.4□□□□□ -0.26
PRDM16-207ENST00000512462 TCP10L2B9ZVM9 353 aa13.4□□□□□ -0.26
PRDM16-207ENST00000512462 CCDC122Q5T0U0 273 aa13.4□□□□□ -0.26
PRDM16-207ENST00000512462 CCDC174Q6PII3 467 aa13.4□□□□□ -0.26
PRDM16-207ENST00000512462 NTSR2O95665 410 aa13.4□□□□□ -0.26
PRDM16-207ENST00000512462 PLCG2P16885 1265 aa13.4□□□□□ -0.26
PRDM16-207ENST00000512462 NCAPH2Q6IBW4 605 aa13.4□□□□□ -0.26
PRDM16-207ENST00000512462 SLC51AQ86UW1 340 aa13.4□□□□□ -0.26
PRDM16-207ENST00000512462 RGS22Q8NE09 1264 aa13.4□□□□□ -0.26
PRDM16-207ENST00000512462 CCDC42Q96M95 316 aa13.4□□□□□ -0.26
PRDM16-207ENST00000512462 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.4□□□□□ -0.26
PRDM16-207ENST00000512462 SCN11AQ9UI33 1791 aa13.4□□□□□ -0.26
PRDM16-207ENST00000512462 DNAJC21Q5F1R6 531 aaKnown RBP13.4□□□□□ -0.26
PRDM16-207ENST00000512462 RDH13Q8NBN7 331 aa13.4□□□□□ -0.26
PRDM16-207ENST00000512462 GJA10Q969M2 543 aa13.4□□□□□ -0.26
PRDM16-207ENST00000512462 ABCC6O95255 1503 aa13.4□□□□□ -0.27
PRDM16-207ENST00000512462 ENC1O14682 589 aa13.39□□□□□ -0.27
PRDM16-207ENST00000512462 HERC4Q5GLZ8 1057 aaPredicted RBP13.39□□□□□ -0.27
PRDM16-207ENST00000512462 DHX40Q8IX18 779 aaKnown RBP13.39□□□□□ -0.27
PRDM16-207ENST00000512462 SYCP3Q8IZU3 236 aa13.39□□□□□ -0.27
PRDM16-207ENST00000512462 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.39□□□□□ -0.27
PRDM16-207ENST00000512462 HPS3Q969F9 1004 aa13.39□□□□□ -0.27
PRDM16-207ENST00000512462 CTAGE1Q96RT6 745 aa13.39□□□□□ -0.27
PRDM16-207ENST00000512462 ATP8A2Q9NTI2 1148 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms