RNA–Protein interactions for RNA: ENST00000512374.1

SLC1A3-211, Transcript of solute carrier family 1 member 3, humanhuman

TSL 1 (best)

Gene SLC1A3, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3-211ENST00000512374 ALPK3Q96L96 1907 aa11.7□□□□□ -0.54
SLC1A3-211ENST00000512374 CDK5RAP2Q96SN8 1893 aa11.7□□□□□ -0.54
SLC1A3-211ENST00000512374 LAMA3Q16787 3333 aa11.7□□□□□ -0.54
SLC1A3-211ENST00000512374 ZNF236Q9UL36 1845 aa11.7□□□□□ -0.54
SLC1A3-211ENST00000512374 GOLGA8CPA6NN73 597 aa11.69□□□□□ -0.54
SLC1A3-211ENST00000512374 PPP1R3GB7ZBB8 358 aa11.69□□□□□ -0.54
SLC1A3-211ENST00000512374 SLC25A27O95847 323 aa11.69□□□□□ -0.54
SLC1A3-211ENST00000512374 VCAM1P19320 739 aa11.69□□□□□ -0.54
SLC1A3-211ENST00000512374 MAGEA10P43363 369 aaPredicted RBP11.69□□□□□ -0.54
SLC1A3-211ENST00000512374 ATP2B2Q01814 1243 aa11.69□□□□□ -0.54
SLC1A3-211ENST00000512374 TMEM179Q6ZVK1 233 aa11.69□□□□□ -0.54
SLC1A3-211ENST00000512374 ADGRA1Q86SQ6 560 aa11.69□□□□□ -0.54
SLC1A3-211ENST00000512374 RPAP2Q8IXW5 612 aaPredicted RBP11.69□□□□□ -0.54
SLC1A3-211ENST00000512374 FTSJ3Q8IY81 847 aaKnown RBP11.69□□□□□ -0.54
SLC1A3-211ENST00000512374 C7orf61Q8IZ16 206 aa11.69□□□□□ -0.54
SLC1A3-211ENST00000512374 TMEM57Q8N5G2 664 aa11.69□□□□□ -0.54
SLC1A3-211ENST00000512374 MSL3Q8N5Y2 521 aaKnown RBP11.69□□□□□ -0.54
SLC1A3-211ENST00000512374 EAF2Q96CJ1 260 aaPredicted RBP11.69□□□□□ -0.54
SLC1A3-211ENST00000512374 FEZ1Q99689 392 aa11.69□□□□□ -0.54
SLC1A3-211ENST00000512374 LBHD1Q9BQE6 289 aaPredicted RBP11.69□□□□□ -0.54
SLC1A3-211ENST00000512374 RIOK1Q9BRS2 568 aaKnown RBP11.69□□□□□ -0.54
SLC1A3-211ENST00000512374 CRNKL1Q9BZJ0 848 aaKnown RBP11.69□□□□□ -0.54
SLC1A3-211ENST00000512374 UBE2OQ9C0C9 1292 aaKnown RBP11.69□□□□□ -0.54
SLC1A3-211ENST00000512374 PORCNQ9H237 461 aa11.69□□□□□ -0.54
SLC1A3-211ENST00000512374 CWC22Q9HCG8 908 aaKnown RBP11.69□□□□□ -0.54
SLC1A3-211ENST00000512374 MTMR10Q9NXD2 777 aa11.69□□□□□ -0.54
SLC1A3-211ENST00000512374 DDX60LQ5H9U9 1706 aaKnown RBP11.69□□□□□ -0.54
SLC1A3-211ENST00000512374 TMEM265A0A087WTH1 108 aa11.68□□□□□ -0.54
SLC1A3-211ENST00000512374 HMMRO75330 724 aa11.68□□□□□ -0.54
SLC1A3-211ENST00000512374 BCAR3O75815 825 aa11.68□□□□□ -0.54
SLC1A3-211ENST00000512374 IDH1O75874 414 aaKnown RBP11.68□□□□□ -0.54
SLC1A3-211ENST00000512374 SLURP2P0DP57 97 aa11.68□□□□□ -0.54
SLC1A3-211ENST00000512374 JAG1P78504 1218 aa11.68□□□□□ -0.54
SLC1A3-211ENST00000512374 HNRNPUQ00839 825 aaKnown RBP eCLIP11.68□□□□□ -0.54
SLC1A3-211ENST00000512374 SNX17Q15036 470 aa11.68□□□□□ -0.54
SLC1A3-211ENST00000512374 THSD4Q6ZMP0 1018 aa11.68□□□□□ -0.54
SLC1A3-211ENST00000512374 DEFB123Q8N688 67 aa11.68□□□□□ -0.54
SLC1A3-211ENST00000512374 FRAT1Q92837 279 aaPredicted RBP11.68□□□□□ -0.54
SLC1A3-211ENST00000512374 PIH1D3Q9NQM4 214 aaKnown RBP11.68□□□□□ -0.54
SLC1A3-211ENST00000512374 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.68□□□□□ -0.54
SLC1A3-211ENST00000512374 PRKAG2Q9UGJ0 569 aa11.68□□□□□ -0.54
SLC1A3-211ENST00000512374 SYNPO2Q9UMS6 1093 aa11.68□□□□□ -0.54
SLC1A3-211ENST00000512374 MYH1P12882 1939 aa11.68□□□□□ -0.54
SLC1A3-211ENST00000512374 ROBO3Q96MS0 1386 aa11.67□□□□□ -0.54
SLC1A3-211ENST00000512374 SPDYE16A6NNV3 312 aaPredicted RBP11.67□□□□□ -0.54
SLC1A3-211ENST00000512374 DLL1O00548 723 aa11.67□□□□□ -0.54
SLC1A3-211ENST00000512374 SOX1O00570 391 aaPredicted RBP11.67□□□□□ -0.54
SLC1A3-211ENST00000512374 SEPT4O43236 478 aa11.67□□□□□ -0.54
SLC1A3-211ENST00000512374 RAB11FIP3O75154 756 aa11.67□□□□□ -0.54
SLC1A3-211ENST00000512374 CNMDO75829 334 aa11.67□□□□□ -0.54
SLC1A3-211ENST00000512374 SHMT1P34896 483 aa11.67□□□□□ -0.54
SLC1A3-211ENST00000512374 CLASRPQ8N2M8 674 aaKnown RBP11.67□□□□□ -0.54
SLC1A3-211ENST00000512374 MAGEB6Q8N7X4 407 aa11.67□□□□□ -0.54
SLC1A3-211ENST00000512374 WNT2BQ93097 391 aa11.67□□□□□ -0.54
SLC1A3-211ENST00000512374 KIF1BPQ96EK5 621 aa11.67□□□□□ -0.54
SLC1A3-211ENST00000512374 SNRKQ9NRH2 765 aa11.67□□□□□ -0.54
SLC1A3-211ENST00000512374 ADAMTS5Q9UNA0 930 aa11.67□□□□□ -0.54
SLC1A3-211ENST00000512374 TMX2Q9Y320 296 aa11.67□□□□□ -0.54
SLC1A3-211ENST00000512374 MAGEB6P1A0A0J9YX57 407 aa11.66□□□□□ -0.54
SLC1A3-211ENST00000512374 GDF11O95390 407 aa11.66□□□□□ -0.54
SLC1A3-211ENST00000512374 POLR3DP05423 398 aaPredicted RBP11.66□□□□□ -0.54
SLC1A3-211ENST00000512374 CYBAP13498 195 aa11.66□□□□□ -0.54
SLC1A3-211ENST00000512374 TRIM32Q13049 653 aa11.66□□□□□ -0.54
SLC1A3-211ENST00000512374 CAMK2BQ13554 666 aa11.66□□□□□ -0.54
SLC1A3-211ENST00000512374 TYW1BQ6NUM6 668 aa11.66□□□□□ -0.54
SLC1A3-211ENST00000512374 AMOTL1Q8IY63 956 aa11.66□□□□□ -0.54
SLC1A3-211ENST00000512374 DDRGK1Q96HY6 314 aa11.66□□□□□ -0.54
SLC1A3-211ENST00000512374 PAGR1Q9BTK6 254 aa11.66□□□□□ -0.54
SLC1A3-211ENST00000512374 TANGO6Q9C0B7 1094 aa11.66□□□□□ -0.54
SLC1A3-211ENST00000512374 ARHGEF10LQ9HCE6 1279 aa11.66□□□□□ -0.54
SLC1A3-211ENST00000512374 WDR46O15213 610 aaKnown RBP11.65□□□□□ -0.54
SLC1A3-211ENST00000512374 CCND3P30281 292 aaPredicted RBP11.65□□□□□ -0.54
SLC1A3-211ENST00000512374 RAB3GAP1Q15042 981 aa11.65□□□□□ -0.54
SLC1A3-211ENST00000512374 LRRC26Q2I0M4 334 aa11.65□□□□□ -0.54
SLC1A3-211ENST00000512374 SLC9C2Q5TAH2 1124 aa11.65□□□□□ -0.54
SLC1A3-211ENST00000512374 CEP85Q6P2H3 762 aa11.65□□□□□ -0.54
SLC1A3-211ENST00000512374 GIMAP6Q6P9H5 292 aa11.65□□□□□ -0.54
SLC1A3-211ENST00000512374 DPP9Q86TI2 863 aa11.65□□□□□ -0.54
SLC1A3-211ENST00000512374 CLUAP1Q96AJ1 413 aa11.65□□□□□ -0.54
SLC1A3-211ENST00000512374 LRCH3Q96II8 777 aa11.65□□□□□ -0.54
SLC1A3-211ENST00000512374 SEZ6LQ9BYH1 1024 aa11.65□□□□□ -0.54
SLC1A3-211ENST00000512374 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.65□□□□□ -0.54
SLC1A3-211ENST00000512374 SPATC1LQ9H0A9 340 aa11.65□□□□□ -0.54
SLC1A3-211ENST00000512374 RPAP3Q9H6T3 665 aaPredicted RBP11.65□□□□□ -0.54
SLC1A3-211ENST00000512374 KANSL2Q9H9L4 492 aa11.65□□□□□ -0.54
SLC1A3-211ENST00000512374 ZMYND8Q9ULU4 1186 aaPredicted RBP11.65□□□□□ -0.54
SLC1A3-211ENST00000512374 A0A0C4DFX4 3053 aa11.65□□□□□ -0.54
SLC1A3-211ENST00000512374 KBTBD13C9JR72 458 aa11.64□□□□□ -0.55
SLC1A3-211ENST00000512374 FDX1P10109 184 aa11.64□□□□□ -0.55
SLC1A3-211ENST00000512374 COL9A1P20849 921 aa11.64□□□□□ -0.55
SLC1A3-211ENST00000512374 GUCY1A2P33402 732 aa11.64□□□□□ -0.55
SLC1A3-211ENST00000512374 DYNLL1P63167 89 aaKnown RBP11.64□□□□□ -0.55
SLC1A3-211ENST00000512374 SMAD3P84022 425 aaKnown RBP11.64□□□□□ -0.55
SLC1A3-211ENST00000512374 UBE3CQ15386 1083 aa11.64□□□□□ -0.55
SLC1A3-211ENST00000512374 ZSCAN25Q6NSZ9 544 aa11.64□□□□□ -0.55
SLC1A3-211ENST00000512374 RHPN1Q8TCX5 695 aa11.64□□□□□ -0.55
SLC1A3-211ENST00000512374 TOX2Q96NM4 488 aa11.64□□□□□ -0.55
SLC1A3-211ENST00000512374 TSEN34Q9BSV6 310 aaKnown RBP11.64□□□□□ -0.55
SLC1A3-211ENST00000512374 DCP1AQ9NPI6 582 aaPredicted RBP11.64□□□□□ -0.55
SLC1A3-211ENST00000512374 BTBD7Q9P203 1132 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms