RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 VWCEQ96DN2 955 aa11.28□□□□□ -0.6
NUP54-211ENST00000512151 UIMC1Q96RL1 719 aa11.28□□□□□ -0.6
NUP54-211ENST00000512151 TSEN34Q9BSV6 310 aaKnown RBP11.28□□□□□ -0.6
NUP54-211ENST00000512151 KIAA1683Q9H0B3 1180 aa11.28□□□□□ -0.6
NUP54-211ENST00000512151 CERS4Q9HA82 394 aa11.28□□□□□ -0.6
NUP54-211ENST00000512151 HMG20BQ9P0W2 317 aa11.28□□□□□ -0.6
NUP54-211ENST00000512151 SAP30BPQ9UHR5 308 aaKnown RBP11.28□□□□□ -0.6
NUP54-211ENST00000512151 COG5Q9UP83 839 aa11.28□□□□□ -0.6
NUP54-211ENST00000512151 PA2G4Q9UQ80 394 aaKnown RBP11.28□□□□□ -0.6
NUP54-211ENST00000512151 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.28□□□□□ -0.6
NUP54-211ENST00000512151 A0A0G2JMZ2 1700 aa11.28□□□□□ -0.6
NUP54-211ENST00000512151 ROBO3Q96MS0 1386 aa11.28□□□□□ -0.6
NUP54-211ENST00000512151 FLT1P17948 1338 aa11.28□□□□□ -0.6
NUP54-211ENST00000512151 UMODL1Q5DID0 1318 aa11.28□□□□□ -0.6
NUP54-211ENST00000512151 SYNRGQ9UMZ2 1314 aa11.28□□□□□ -0.6
NUP54-211ENST00000512151 ZNF318Q5VUA4 2279 aa11.28□□□□□ -0.6
NUP54-211ENST00000512151 APBB1O00213 710 aa11.28□□□□□ -0.6
NUP54-211ENST00000512151 ARHGEF15O94989 841 aa11.28□□□□□ -0.6
NUP54-211ENST00000512151 LDHCP07864 332 aa11.28□□□□□ -0.6
NUP54-211ENST00000512151 GSTO1P78417 241 aa11.28□□□□□ -0.6
NUP54-211ENST00000512151 KCNA10Q16322 511 aa11.28□□□□□ -0.6
NUP54-211ENST00000512151 SHCBP1Q8NEM2 672 aa11.28□□□□□ -0.6
NUP54-211ENST00000512151 CDCA7LQ96GN5 454 aa11.28□□□□□ -0.6
NUP54-211ENST00000512151 FOCADQ5VW36 1801 aa11.27□□□□□ -0.6
NUP54-211ENST00000512151 FGBP02675 491 aa11.27□□□□□ -0.61
NUP54-211ENST00000512151 PGK2P07205 417 aa11.27□□□□□ -0.61
NUP54-211ENST00000512151 ADGRA1Q86SQ6 560 aa11.27□□□□□ -0.61
NUP54-211ENST00000512151 FAM126BQ8IXS8 530 aa11.27□□□□□ -0.61
NUP54-211ENST00000512151 HLA-CQ95604 372 aa11.27□□□□□ -0.61
NUP54-211ENST00000512151 XAGE2Q96GT9 111 aa11.27□□□□□ -0.61
NUP54-211ENST00000512151 TRIM34Q9BYJ4 488 aa11.27□□□□□ -0.61
NUP54-211ENST00000512151 AATFQ9NY61 560 aaKnown RBP eCLIP11.27□□□□□ -0.61
NUP54-211ENST00000512151 RAI14Q9P0K7 980 aa11.27□□□□□ -0.61
NUP54-211ENST00000512151 NRBP1Q9UHY1 535 aa11.27□□□□□ -0.61
NUP54-211ENST00000512151 PCDHA11Q9Y5I1 949 aa11.27□□□□□ -0.61
NUP54-211ENST00000512151 ZDBF2Q9HCK1 2354 aa11.26□□□□□ -0.61
NUP54-211ENST00000512151 GUCY1A2P33402 732 aa11.26□□□□□ -0.61
NUP54-211ENST00000512151 IL15P40933 162 aaPredicted RBP11.26□□□□□ -0.61
NUP54-211ENST00000512151 USP14P54578 494 aa11.26□□□□□ -0.61
NUP54-211ENST00000512151 RAB3GAP1Q15042 981 aa11.26□□□□□ -0.61
NUP54-211ENST00000512151 KIAA1755Q5JYT7 1200 aa11.26□□□□□ -0.61
NUP54-211ENST00000512151 NCAPG2Q86XI2 1143 aa11.26□□□□□ -0.61
NUP54-211ENST00000512151 ABRAQ8N0Z2 381 aa11.26□□□□□ -0.61
NUP54-211ENST00000512151 NUP133Q8WUM0 1156 aa11.26□□□□□ -0.61
NUP54-211ENST00000512151 SLC5A4Q9NY91 659 aa11.26□□□□□ -0.61
NUP54-211ENST00000512151 FBXO3Q9UK99 471 aa11.26□□□□□ -0.61
NUP54-211ENST00000512151 MOXD2PA6NHM9 499 aa11.25□□□□□ -0.61
NUP54-211ENST00000512151 GTPBP6O43824 516 aaPredicted RBP11.25□□□□□ -0.61
NUP54-211ENST00000512151 CD4P01730 458 aa11.25□□□□□ -0.61
NUP54-211ENST00000512151 CA3P07451 260 aa11.25□□□□□ -0.61
NUP54-211ENST00000512151 AKR1A1P14550 325 aa11.25□□□□□ -0.61
NUP54-211ENST00000512151 COG2Q14746 738 aa11.25□□□□□ -0.61
NUP54-211ENST00000512151 TATDN1Q6P1N9 297 aa11.25□□□□□ -0.61
NUP54-211ENST00000512151 SPRED2Q7Z698 418 aa11.25□□□□□ -0.61
NUP54-211ENST00000512151 SPATA5Q8NB90 893 aa11.25□□□□□ -0.61
NUP54-211ENST00000512151 TINF2Q9BSI4 451 aa11.25□□□□□ -0.61
NUP54-211ENST00000512151 ELP1O95163 1332 aa11.24□□□□□ -0.61
NUP54-211ENST00000512151 A0A1B0GUL7 405 aa11.24□□□□□ -0.61
NUP54-211ENST00000512151 A0A1W2PRG0 241 aa11.24□□□□□ -0.61
NUP54-211ENST00000512151 ARVCFO00192 962 aa11.24□□□□□ -0.61
NUP54-211ENST00000512151 ADCY6O43306 1168 aa11.24□□□□□ -0.61
NUP54-211ENST00000512151 PPP4CP60510 307 aa11.24□□□□□ -0.61
NUP54-211ENST00000512151 PLS1Q14651 629 aa11.24□□□□□ -0.61
NUP54-211ENST00000512151 ZNF792Q3KQV3 632 aa11.24□□□□□ -0.61
NUP54-211ENST00000512151 GJD3Q8N144 294 aa11.24□□□□□ -0.61
NUP54-211ENST00000512151 ATG4CQ96DT6 458 aa11.24□□□□□ -0.61
NUP54-211ENST00000512151 MTIF3Q9H2K0 278 aaKnown RBP11.24□□□□□ -0.61
NUP54-211ENST00000512151 MROH8Q9H579 483 aa11.24□□□□□ -0.61
NUP54-211ENST00000512151 SALL2Q9Y467 1007 aaPredicted RBP11.24□□□□□ -0.61
NUP54-211ENST00000512151 SLC4A7Q9Y6M7 1214 aa11.24□□□□□ -0.61
NUP54-211ENST00000512151 MROH7Q68CQ1 1323 aa11.23□□□□□ -0.61
NUP54-211ENST00000512151 A0A0U1RQG5 324 aaPredicted RBP11.23□□□□□ -0.61
NUP54-211ENST00000512151 LPXNO60711 386 aa11.23□□□□□ -0.61
NUP54-211ENST00000512151 ASGR1P07306 291 aa11.23□□□□□ -0.61
NUP54-211ENST00000512151 FCER1AP12319 257 aa11.23□□□□□ -0.61
NUP54-211ENST00000512151 ATP2A2P16615 1042 aaKnown RBP11.23□□□□□ -0.61
NUP54-211ENST00000512151 MCAMP43121 646 aa11.23□□□□□ -0.61
NUP54-211ENST00000512151 CCL23P55773 120 aa11.23□□□□□ -0.61
NUP54-211ENST00000512151 DYNLL1P63167 89 aaKnown RBP11.23□□□□□ -0.61
NUP54-211ENST00000512151 TFCP2Q12800 502 aa11.23□□□□□ -0.61
NUP54-211ENST00000512151 GRB10Q13322 594 aa11.23□□□□□ -0.61
NUP54-211ENST00000512151 FAM178BQ8IXR5 827 aa11.23□□□□□ -0.61
NUP54-211ENST00000512151 MRPL50Q8N5N7 158 aaKnown RBP11.23□□□□□ -0.61
NUP54-211ENST00000512151 GLT1D1Q96MS3 346 aa11.23□□□□□ -0.61
NUP54-211ENST00000512151 TANGO6Q9C0B7 1094 aa11.23□□□□□ -0.61
NUP54-211ENST00000512151 WNT8AQ9H1J5 351 aa11.23□□□□□ -0.61
NUP54-211ENST00000512151 HOXC10Q9NYD6 342 aa11.23□□□□□ -0.61
NUP54-211ENST00000512151 SNAI1O95863 264 aaPredicted RBP11.22□□□□□ -0.61
NUP54-211ENST00000512151 CST5P28325 142 aaPredicted RBP11.22□□□□□ -0.61
NUP54-211ENST00000512151 TAP1Q03518 808 aa11.22□□□□□ -0.61
NUP54-211ENST00000512151 TTLL4Q14679 1199 aa11.22□□□□□ -0.61
NUP54-211ENST00000512151 MVPQ14764 893 aaKnown RBP11.22□□□□□ -0.61
NUP54-211ENST00000512151 ABCB5Q2M3G0 1257 aa11.22□□□□□ -0.61
NUP54-211ENST00000512151 WDR63Q8IWG1 891 aa11.22□□□□□ -0.61
NUP54-211ENST00000512151 ARNTL2Q8WYA1 636 aa11.22□□□□□ -0.61
NUP54-211ENST00000512151 VTI1AQ96AJ9 217 aa11.22□□□□□ -0.61
NUP54-211ENST00000512151 MMP19Q99542 508 aa11.22□□□□□ -0.61
NUP54-211ENST00000512151 HIPK3Q9H422 1215 aa11.22□□□□□ -0.61
NUP54-211ENST00000512151 COL4A4P53420 1690 aaPredicted RBP11.22□□□□□ -0.61
NUP54-211ENST00000512151 MYH1P12882 1939 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 196.8 ms