RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 SPP2Q13103 211 aa22.97■■□□□ 1.27
SMAD1-211ENST00000512019 ZNF280CQ8ND82 737 aa22.97■■□□□ 1.27
SMAD1-211ENST00000512019 NKX2-3Q8TAU0 364 aa22.97■■□□□ 1.27
SMAD1-211ENST00000512019 WDR18Q9BV38 432 aa22.97■■□□□ 1.27
SMAD1-211ENST00000512019 UNC93B1Q9H1C4 597 aa22.97■■□□□ 1.27
SMAD1-211ENST00000512019 IL17RBQ9NRM6 502 aa22.97■■□□□ 1.27
SMAD1-211ENST00000512019 NYAP2Q9P242 653 aa22.97■■□□□ 1.27
SMAD1-211ENST00000512019 STX8Q9UNK0 236 aa22.97■■□□□ 1.27
SMAD1-211ENST00000512019 ADCY3O60266 1144 aa22.96■■□□□ 1.27
SMAD1-211ENST00000512019 NMT2O60551 498 aa22.96■■□□□ 1.27
SMAD1-211ENST00000512019 GJB1P08034 283 aa22.96■■□□□ 1.27
SMAD1-211ENST00000512019 ELNP15502 786 aa22.96■■□□□ 1.27
SMAD1-211ENST00000512019 GJA8P48165 433 aa22.96■■□□□ 1.27
SMAD1-211ENST00000512019 ANTXR2P58335 489 aa22.96■■□□□ 1.27
SMAD1-211ENST00000512019 UBXN2AP68543 259 aa22.96■■□□□ 1.27
SMAD1-211ENST00000512019 ATP2B2Q01814 1243 aa22.96■■□□□ 1.27
SMAD1-211ENST00000512019 CLEC10AQ8IUN9 316 aa22.96■■□□□ 1.27
SMAD1-211ENST00000512019 ANKRD13CQ8N6S4 541 aa22.96■■□□□ 1.27
SMAD1-211ENST00000512019 SLAIN1Q8ND83 568 aa22.96■■□□□ 1.27
SMAD1-211ENST00000512019 TMEM87BQ96K49 555 aa22.96■■□□□ 1.27
SMAD1-211ENST00000512019 TTC14Q96N46 770 aa22.96■■□□□ 1.27
SMAD1-211ENST00000512019 FEZ1Q99689 392 aa22.96■■□□□ 1.27
SMAD1-211ENST00000512019 ZKSCAN3Q9BRR0 538 aa22.96■■□□□ 1.27
SMAD1-211ENST00000512019 ZSWIM6Q9HCJ5 1215 aa22.96■■□□□ 1.27
SMAD1-211ENST00000512019 CYP46A1Q9Y6A2 500 aa22.96■■□□□ 1.27
SMAD1-211ENST00000512019 TNKSO95271 1327 aa22.96■■□□□ 1.27
SMAD1-211ENST00000512019 TNPO2O14787 897 aaKnown RBP22.95■■□□□ 1.26
SMAD1-211ENST00000512019 IFIT3O14879 490 aaKnown RBP22.95■■□□□ 1.26
SMAD1-211ENST00000512019 PLXNB2O15031 1838 aa22.95■■□□□ 1.26
SMAD1-211ENST00000512019 EEF2P13639 858 aaKnown RBP22.95■■□□□ 1.26
SMAD1-211ENST00000512019 RPS6KB1P23443 525 aa22.95■■□□□ 1.26
SMAD1-211ENST00000512019 RUFY3Q7L099 469 aa22.95■■□□□ 1.26
SMAD1-211ENST00000512019 CHST3Q7LGC8 479 aa22.95■■□□□ 1.26
SMAD1-211ENST00000512019 DGKHQ86XP1 1220 aa22.95■■□□□ 1.26
SMAD1-211ENST00000512019 SYNPO2Q9UMS6 1093 aa22.95■■□□□ 1.26
SMAD1-211ENST00000512019 NOVP48745 357 aa22.94■■□□□ 1.26
SMAD1-211ENST00000512019 FXR1P51114 621 aaKnown RBP eCLIP22.94■■□□□ 1.26
SMAD1-211ENST00000512019 HMGCS2P54868 508 aa22.94■■□□□ 1.26
SMAD1-211ENST00000512019 TMEM67Q5HYA8 995 aa22.94■■□□□ 1.26
SMAD1-211ENST00000512019 UBE2Q1Q7Z7E8 422 aa22.94■■□□□ 1.26
SMAD1-211ENST00000512019 ENAHQ8N8S7 591 aaPredicted RBP22.94■■□□□ 1.26
SMAD1-211ENST00000512019 CEP290O15078 2479 aa22.94■■□□□ 1.26
SMAD1-211ENST00000512019 USP17L10C9JJH3 530 aa22.93■■□□□ 1.26
SMAD1-211ENST00000512019 USP14P54578 494 aa22.93■■□□□ 1.26
SMAD1-211ENST00000512019 EXOSC10Q01780 885 aaKnown RBP22.93■■□□□ 1.26
SMAD1-211ENST00000512019 WTAPQ15007 396 aa22.93■■□□□ 1.26
SMAD1-211ENST00000512019 IFIT1BQ5T764 474 aaKnown RBP22.93■■□□□ 1.26
SMAD1-211ENST00000512019 PROCA1Q8NCQ7 364 aaPredicted RBP22.93■■□□□ 1.26
SMAD1-211ENST00000512019 U2AF1L4Q8WU68 220 aaKnown RBP22.93■■□□□ 1.26
SMAD1-211ENST00000512019 UPF3BQ9BZI7 483 aaKnown RBP22.93■■□□□ 1.26
SMAD1-211ENST00000512019 KIAA1683Q9H0B3 1180 aa22.93■■□□□ 1.26
SMAD1-211ENST00000512019 CLIP2Q9UDT6 1046 aa22.93■■□□□ 1.26
SMAD1-211ENST00000512019 TMX2Q9Y320 296 aa22.93■■□□□ 1.26
SMAD1-211ENST00000512019 ALPK3Q96L96 1907 aa22.92■■□□□ 1.26
SMAD1-211ENST00000512019 INHAP05111 366 aa22.92■■□□□ 1.26
SMAD1-211ENST00000512019 TOP1P11387 765 aaKnown RBP22.92■■□□□ 1.26
SMAD1-211ENST00000512019 BACE1P56817 501 aa22.92■■□□□ 1.26
SMAD1-211ENST00000512019 FGD1P98174 961 aa22.92■■□□□ 1.26
SMAD1-211ENST00000512019 MTMR2Q13614 643 aa22.92■■□□□ 1.26
SMAD1-211ENST00000512019 COL9A3Q14050 684 aaPredicted RBP22.92■■□□□ 1.26
SMAD1-211ENST00000512019 SIAH1Q8IUQ4 282 aa22.92■■□□□ 1.26
SMAD1-211ENST00000512019 ACER1Q8TDN7 264 aa22.92■■□□□ 1.26
SMAD1-211ENST00000512019 ANKS1AQ92625 1134 aa22.92■■□□□ 1.26
SMAD1-211ENST00000512019 DPF3Q92784 378 aa22.92■■□□□ 1.26
SMAD1-211ENST00000512019 MKL1Q969V6 931 aa22.92■■□□□ 1.26
SMAD1-211ENST00000512019 PNMA3Q9UL41 463 aa22.92■■□□□ 1.26
SMAD1-211ENST00000512019 MYH4Q9Y623 1939 aa22.91■■□□□ 1.26
SMAD1-211ENST00000512019 C19orf81C9J6K1 198 aa22.91■■□□□ 1.26
SMAD1-211ENST00000512019 SH2B2O14492 632 aaPredicted RBP22.91■■□□□ 1.26
SMAD1-211ENST00000512019 CPA1P15085 419 aa22.91■■□□□ 1.26
SMAD1-211ENST00000512019 SEC23AQ15436 765 aa22.91■■□□□ 1.26
SMAD1-211ENST00000512019 FAM110CQ1W6H9 321 aa22.91■■□□□ 1.26
SMAD1-211ENST00000512019 RCSD1Q6JBY9 416 aa22.91■■□□□ 1.26
SMAD1-211ENST00000512019 TMTC2Q8N394 836 aa22.91■■□□□ 1.26
SMAD1-211ENST00000512019 IGDCC4Q8TDY8 1250 aa22.91■■□□□ 1.26
SMAD1-211ENST00000512019 TCEANC2Q96MN5 208 aa22.91■■□□□ 1.26
SMAD1-211ENST00000512019 KAT14Q9H8E8 782 aa22.91■■□□□ 1.26
SMAD1-211ENST00000512019 GOPCQ9HD26 462 aa22.91■■□□□ 1.26
SMAD1-211ENST00000512019 A0A1W2PRG0 241 aa22.9■■□□□ 1.26
SMAD1-211ENST00000512019 IRF5Q13568 498 aa22.9■■□□□ 1.26
SMAD1-211ENST00000512019 RABEP1Q15276 862 aa22.9■■□□□ 1.26
SMAD1-211ENST00000512019 LRRC47Q8N1G4 583 aaKnown RBP22.9■■□□□ 1.26
SMAD1-211ENST00000512019 PXYLP1Q8TE99 480 aa22.9■■□□□ 1.26
SMAD1-211ENST00000512019 KIF2CQ99661 725 aa22.9■■□□□ 1.26
SMAD1-211ENST00000512019 TMEM47Q9BQJ4 181 aa22.9■■□□□ 1.26
SMAD1-211ENST00000512019 LRRC2Q9BYS8 371 aa22.9■■□□□ 1.26
SMAD1-211ENST00000512019 LY9Q9HBG7 655 aa22.9■■□□□ 1.26
SMAD1-211ENST00000512019 PDRG1Q9NUG6 133 aa22.9■■□□□ 1.26
SMAD1-211ENST00000512019 TMOD4Q9NZQ9 345 aa22.9■■□□□ 1.26
SMAD1-211ENST00000512019 SGPL1O95470 568 aa22.89■■□□□ 1.25
SMAD1-211ENST00000512019 LIFRP42702 1097 aa22.89■■□□□ 1.25
SMAD1-211ENST00000512019 SH3D19Q5HYK7 790 aa22.89■■□□□ 1.25
SMAD1-211ENST00000512019 USP17L2Q6R6M4 530 aa22.89■■□□□ 1.25
SMAD1-211ENST00000512019 FBXL16Q8N461 479 aa22.89■■□□□ 1.25
SMAD1-211ENST00000512019 GMCL1P1Q8NEA9 526 aa22.89■■□□□ 1.25
SMAD1-211ENST00000512019 IL27Q8NEV9 243 aa22.89■■□□□ 1.25
SMAD1-211ENST00000512019 COA7Q96BR5 231 aa22.89■■□□□ 1.25
SMAD1-211ENST00000512019 ASCC2Q9H1I8 757 aaPredicted RBP22.89■■□□□ 1.25
SMAD1-211ENST00000512019 FARP2O94887 1054 aaPredicted RBP22.88■■□□□ 1.25
SMAD1-211ENST00000512019 ZYXQ15942 572 aaKnown RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms