RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 SLC7A14Q8TBB6 771 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 COPRSQ9NQ92 184 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 AJAP1Q9UKB5 411 aaPredicted RBP1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 R3HCC1Q9Y3T6 440 aaKnown RBP1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 EP300Q09472 2414 aaPredicted RBP1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 IGKV6D-41A0A0C4DH26 115 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 RASSF9O75901 435 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 DSG3P32926 999 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 ANP32AP39687 249 aaKnown RBP1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 HIRAP54198 1017 aaPredicted RBP1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 ANAPC15P60006 121 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 ATP8B2P98198 1209 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 CHPFQ8IZ52 775 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 IQCKQ8N0W5 287 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 C7orf31Q8N865 590 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 LENG9Q96B70 501 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 MTMR8Q96EF0 704 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 SEZ6LQ9BYH1 1024 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 ABCB6Q9NP58 842 aa1.99□□□□□ -2.09
TRAPPC13-211ENST00000512009 ST5P78524 1137 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 EN1Q05925 392 aaPredicted RBP1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 CDCA8Q53HL2 280 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 COBLL1Q53SF7 1204 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 CYP4V2Q6ZWL3 525 aaPredicted RBP1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 ZSCAN29Q8IWY8 852 aaPredicted RBP1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 TRMT44Q8IYL2 757 aaKnown RBP1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 RBM38Q9H0Z9 239 aaKnown RBP1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 SUGT1Q9Y2Z0 365 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 BAHCC1Q9P281 2608 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 FRMPD4Q14CM0 1322 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 WDR19Q8NEZ3 1342 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 TEX15Q9BXT5 2789 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 FRMD3A2A2Y4 597 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 ACTN4O43707 911 aaKnown RBP1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 CLK2P49760 499 aaKnown RBP1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 EMP3P54852 163 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 ZNF687Q8N1G0 1237 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 ATP8B4Q8TF62 1192 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 NCSTNQ92542 709 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 SEC62Q99442 399 aaKnown RBP1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 IRX2Q9BZI1 471 aaPredicted RBP1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 GGNBP2Q9H3C7 697 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 HDAC5Q9UQL6 1122 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 USP20Q9Y2K6 914 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 DOCK9Q9BZ29 2069 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 KMT2AQ03164 3969 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 DLGAP1O14490 977 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 FAM189A1O60320 539 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 IL1R1P14778 569 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 CST5P28325 142 aaPredicted RBP1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 DDB1Q16531 1140 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 AKAP4Q5JQC9 854 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 CC2D1BQ5T0F9 858 aaKnown RBP1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 ASRGL1Q7L266 308 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 SMAP1Q8IYB5 467 aaPredicted RBP1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 STXBP5LQ9Y2K9 1186 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 RIPOR2Q9Y4F9 1068 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 A0A0U1RQG5 324 aaPredicted RBP1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 C21orf2O43822 256 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 ABCB7O75027 752 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 CYP4A11Q02928 519 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 NEUROD2Q15784 382 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 WLSQ5T9L3 541 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 PXYLP1Q8TE99 480 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 EDC3Q96F86 508 aaKnown RBP1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 FGFBP2Q9BYJ0 223 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 C22orf23Q9BZE7 217 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 ANGEL1Q9UNK9 670 aaKnown RBP1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 AKAP2Q9Y2D5 859 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 EVPLQ92817 2033 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 CYTH3O43739 400 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 NR1I2O75469 434 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 XRCC5P13010 732 aaKnown RBP1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 FKBP4Q02790 459 aaKnown RBP eCLIP1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 FAM173BQ6P4H8 233 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 PACS2Q86VP3 889 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 MBOAT7Q96N66 472 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 RIOK1Q9BRS2 568 aaKnown RBP1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 NOL10Q9BSC4 688 aaKnown RBP1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 BCL2L13Q9BXK5 485 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 PDCL3Q9H2J4 239 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 C10orf88Q9H8K7 445 aa1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 MRPL44Q9H9J2 332 aaKnown RBP1.98□□□□□ -2.09
TRAPPC13-211ENST00000512009 ZFC3H1O60293 1989 aaKnown RBP1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 FOXN1O15353 648 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 RRP9O43818 475 aaKnown RBP1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 TBC1D12O60347 775 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 ARRB2P32121 409 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 RDXP35241 583 aaKnown RBP1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 KLHDC8BQ8IXV7 354 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 GPR65Q8IYL9 337 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 KATNBL1Q9H079 304 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 RRP7AQ9Y3A4 280 aaKnown RBP1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 CKAP5Q14008 2032 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 MYO10Q9HD67 2058 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 DOPEY1Q5JWR5 2465 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 C5orf60A6NFR6 353 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 POU2F2P09086 479 aa1.97□□□□□ -2.09
TRAPPC13-211ENST00000512009 CDC25BP30305 580 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms