RNA–Protein interactions for RNA: ENST00000511748.5

NR1I3-229, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-229ENST00000511748 ZNF417Q8TAU3 575 aa8.86□□□□□ -0.99
NR1I3-229ENST00000511748 ZNF587Q96SQ5 575 aaPredicted RBP8.86□□□□□ -0.99
NR1I3-229ENST00000511748 RTFDC1Q9BY42 306 aaPredicted RBP8.86□□□□□ -0.99
NR1I3-229ENST00000511748 TNRC18O15417 2968 aaPredicted RBP8.86□□□□□ -0.99
NR1I3-229ENST00000511748 CASP8AP2Q9UKL3 1982 aa8.86□□□□□ -0.99
NR1I3-229ENST00000511748 LAMB4A4D0S4 1761 aa8.86□□□□□ -0.99
NR1I3-229ENST00000511748 MAP3K15Q6ZN16 1313 aa8.85□□□□□ -0.99
NR1I3-229ENST00000511748 TRAF5O00463 557 aa8.85□□□□□ -0.99
NR1I3-229ENST00000511748 AOC2O75106 756 aa8.85□□□□□ -0.99
NR1I3-229ENST00000511748 BBOX1O75936 387 aa8.85□□□□□ -0.99
NR1I3-229ENST00000511748 KIF4AO95239 1232 aa8.85□□□□□ -0.99
NR1I3-229ENST00000511748 MAPK1P28482 360 aa8.85□□□□□ -0.99
NR1I3-229ENST00000511748 EHHADHQ08426 723 aa8.85□□□□□ -0.99
NR1I3-229ENST00000511748 PKN2Q16513 984 aaKnown RBP8.85□□□□□ -0.99
NR1I3-229ENST00000511748 OLFM4Q6UX06 510 aa8.85□□□□□ -0.99
NR1I3-229ENST00000511748 ADAMTSL4Q6UY14 1074 aa8.85□□□□□ -0.99
NR1I3-229ENST00000511748 TTC16Q8NEE8 873 aa8.85□□□□□ -0.99
NR1I3-229ENST00000511748 GCC1Q96CN9 775 aa8.85□□□□□ -0.99
NR1I3-229ENST00000511748 CITED4Q96RK1 184 aa8.85□□□□□ -0.99
NR1I3-229ENST00000511748 NIF3L1Q9GZT8 377 aa8.85□□□□□ -0.99
NR1I3-229ENST00000511748 SALL4Q9UJQ4 1053 aa8.85□□□□□ -0.99
NR1I3-229ENST00000511748 ATP6V0A2Q9Y487 856 aa8.85□□□□□ -0.99
NR1I3-229ENST00000511748 H7C1D1 291 aa8.84□□□□□ -0.99
NR1I3-229ENST00000511748 NEFMP07197 916 aa8.84□□□□□ -0.99
NR1I3-229ENST00000511748 PRKAR2BP31323 418 aa8.84□□□□□ -0.99
NR1I3-229ENST00000511748 MARSP56192 900 aaKnown RBP8.84□□□□□ -0.99
NR1I3-229ENST00000511748 CXCL9Q07325 125 aa8.84□□□□□ -0.99
NR1I3-229ENST00000511748 TRIM26Q12899 539 aaPredicted RBP8.84□□□□□ -0.99
NR1I3-229ENST00000511748 TAF7Q15545 349 aaPredicted RBP8.84□□□□□ -0.99
NR1I3-229ENST00000511748 GRIK5Q16478 980 aa8.84□□□□□ -0.99
NR1I3-229ENST00000511748 CIAPIN1Q6FI81 312 aa8.84□□□□□ -0.99
NR1I3-229ENST00000511748 CEP120Q8N960 986 aa8.84□□□□□ -0.99
NR1I3-229ENST00000511748 DPF2Q92785 391 aa8.84□□□□□ -0.99
NR1I3-229ENST00000511748 BCL2L13Q9BXK5 485 aa8.84□□□□□ -0.99
NR1I3-229ENST00000511748 SUV39H2Q9H5I1 410 aa8.84□□□□□ -0.99
NR1I3-229ENST00000511748 ZFYVE28Q9HCC9 887 aa8.84□□□□□ -0.99
NR1I3-229ENST00000511748 ABCC12Q96J65 1359 aa8.84□□□□□ -0.99
NR1I3-229ENST00000511748 NUP98P52948 1817 aa8.83□□□□□ -1
NR1I3-229ENST00000511748 FAM177BA6PVY3 158 aa8.83□□□□□ -1
NR1I3-229ENST00000511748 KCNQ3O43525 872 aa8.83□□□□□ -1
NR1I3-229ENST00000511748 PHACTR2O75167 634 aa8.83□□□□□ -1
NR1I3-229ENST00000511748 TRPA1O75762 1119 aa8.83□□□□□ -1
NR1I3-229ENST00000511748 POLR3DP05423 398 aaPredicted RBP8.83□□□□□ -1
NR1I3-229ENST00000511748 EIF2AK2P19525 551 aaKnown RBP8.83□□□□□ -1
NR1I3-229ENST00000511748 CES1P23141 567 aa8.83□□□□□ -1
NR1I3-229ENST00000511748 RPS12P25398 132 aaKnown RBP8.83□□□□□ -1
NR1I3-229ENST00000511748 GSK3AP49840 483 aa8.83□□□□□ -1
NR1I3-229ENST00000511748 GMPSP49915 693 aaPredicted RBP8.83□□□□□ -1
NR1I3-229ENST00000511748 HUNKP57058 714 aa8.83□□□□□ -1
NR1I3-229ENST00000511748 ATP11AP98196 1134 aa8.83□□□□□ -1
NR1I3-229ENST00000511748 KIAA2012Q0VF49 1180 aa8.83□□□□□ -1
NR1I3-229ENST00000511748 HLFQ16534 295 aa8.83□□□□□ -1
NR1I3-229ENST00000511748 RGMBQ6NW40 437 aa8.83□□□□□ -1
NR1I3-229ENST00000511748 DPP8Q6V1X1 898 aaPredicted RBP8.83□□□□□ -1
NR1I3-229ENST00000511748 C2orf69Q8N8R5 385 aa8.83□□□□□ -1
NR1I3-229ENST00000511748 SNX29Q8TEQ0 813 aa8.83□□□□□ -1
NR1I3-229ENST00000511748 TRIM11Q96F44 468 aa8.83□□□□□ -1
NR1I3-229ENST00000511748 SMG9Q9H0W8 520 aaKnown RBP8.83□□□□□ -1
NR1I3-229ENST00000511748 COL4A5P29400 1685 aa8.83□□□□□ -1
NR1I3-229ENST00000511748 AKAP11Q9UKA4 1901 aa8.82□□□□□ -1
NR1I3-229ENST00000511748 PHF20L1A8MW92 1017 aa8.82□□□□□ -1
NR1I3-229ENST00000511748 NID1P14543 1247 aa8.82□□□□□ -1
NR1I3-229ENST00000511748 AFF1P51825 1210 aaKnown RBP8.82□□□□□ -1
NR1I3-229ENST00000511748 HYAL2Q12891 473 aa8.82□□□□□ -1
NR1I3-229ENST00000511748 DSC3Q14574 896 aa8.82□□□□□ -1
NR1I3-229ENST00000511748 PCSK7Q16549 785 aa8.82□□□□□ -1
NR1I3-229ENST00000511748 AOC3Q16853 763 aa8.82□□□□□ -1
NR1I3-229ENST00000511748 HSP90AB3PQ58FF7 597 aa8.82□□□□□ -1
NR1I3-229ENST00000511748 SLC10A5Q5PT55 438 aa8.82□□□□□ -1
NR1I3-229ENST00000511748 CC2D1BQ5T0F9 858 aaKnown RBP8.82□□□□□ -1
NR1I3-229ENST00000511748 KANK3Q6NY19 840 aa8.82□□□□□ -1
NR1I3-229ENST00000511748 ELMSAN1Q6PJG2 1045 aa8.82□□□□□ -1
NR1I3-229ENST00000511748 CTU1Q7Z7A3 348 aaKnown RBP8.82□□□□□ -1
NR1I3-229ENST00000511748 SP8Q8IXZ3 490 aa8.82□□□□□ -1
NR1I3-229ENST00000511748 ZNF34Q8IZ26 560 aa8.82□□□□□ -1
NR1I3-229ENST00000511748 PLD4Q96BZ4 506 aa8.82□□□□□ -1
NR1I3-229ENST00000511748 GLIS2Q9BZE0 524 aaPredicted RBP8.82□□□□□ -1
NR1I3-229ENST00000511748 ZNF408Q9H9D4 720 aa8.82□□□□□ -1
NR1I3-229ENST00000511748 JPH1Q9HDC5 661 aaPredicted RBP8.82□□□□□ -1
NR1I3-229ENST00000511748 LATS2Q9NRM7 1088 aa8.82□□□□□ -1
NR1I3-229ENST00000511748 FAM181BA6NEQ2 426 aa8.81□□□□□ -1
NR1I3-229ENST00000511748 PIP4K2AP48426 406 aaPredicted RBP8.81□□□□□ -1
NR1I3-229ENST00000511748 FKBP1BP68106 108 aa8.81□□□□□ -1
NR1I3-229ENST00000511748 PHACTR3Q96KR7 559 aa8.81□□□□□ -1
NR1I3-229ENST00000511748 HHIPQ96QV1 700 aa8.81□□□□□ -1
NR1I3-229ENST00000511748 UTP14AQ9BVJ6 771 aaKnown RBP8.81□□□□□ -1
NR1I3-229ENST00000511748 RASSF4Q9H2L5 321 aa8.81□□□□□ -1
NR1I3-229ENST00000511748 GBA2Q9HCG7 927 aaPredicted RBP8.81□□□□□ -1
NR1I3-229ENST00000511748 PRDM6Q9NQX0 595 aa8.81□□□□□ -1
NR1I3-229ENST00000511748 CNOT7Q9UIV1 285 aaKnown RBP8.81□□□□□ -1
NR1I3-229ENST00000511748 PRAMEF22A3QJZ6 481 aa8.8□□□□□ -1
NR1I3-229ENST00000511748 TREHO43280 583 aa8.8□□□□□ -1
NR1I3-229ENST00000511748 RGS9O75916 674 aaPredicted RBP8.8□□□□□ -1
NR1I3-229ENST00000511748 NTSR2O95665 410 aa8.8□□□□□ -1
NR1I3-229ENST00000511748 FMR1Q06787 632 aaKnown RBP eCLIP8.8□□□□□ -1
NR1I3-229ENST00000511748 PEAR1Q5VY43 1037 aaPredicted RBP8.8□□□□□ -1
NR1I3-229ENST00000511748 MCM10Q7L590 875 aa8.8□□□□□ -1
NR1I3-229ENST00000511748 KRT26Q7Z3Y9 468 aa8.8□□□□□ -1
NR1I3-229ENST00000511748 NCAPG2Q86XI2 1143 aa8.8□□□□□ -1
NR1I3-229ENST00000511748 DCPSQ96C86 337 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms