RNA–Protein interactions for RNA: ENST00000511697.1

CALCOCO2-219, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-219ENST00000511697 SENP6Q9GZR1 1112 aaPredicted RBP11.93□□□□□ -0.5
CALCOCO2-219ENST00000511697 TSHZ2Q9NRE2 1034 aa11.93□□□□□ -0.5
CALCOCO2-219ENST00000511697 ZBTB40Q9NUA8 1239 aa11.93□□□□□ -0.5
CALCOCO2-219ENST00000511697 SWAP70Q9UH65 585 aa11.93□□□□□ -0.5
CALCOCO2-219ENST00000511697 DDX20Q9UHI6 824 aaKnown RBP11.93□□□□□ -0.5
CALCOCO2-219ENST00000511697 FLOT1O75955 427 aa11.92□□□□□ -0.5
CALCOCO2-219ENST00000511697 HOXC6P09630 235 aa11.92□□□□□ -0.5
CALCOCO2-219ENST00000511697 ERCC3P19447 782 aa11.92□□□□□ -0.5
CALCOCO2-219ENST00000511697 ATN1P54259 1190 aaPredicted RBP11.92□□□□□ -0.5
CALCOCO2-219ENST00000511697 MDM2Q00987 491 aaPredicted RBP11.92□□□□□ -0.5
CALCOCO2-219ENST00000511697 TDHQ8IZJ6 230 aa11.92□□□□□ -0.5
CALCOCO2-219ENST00000511697 TRPV1Q8NER1 839 aa11.92□□□□□ -0.5
CALCOCO2-219ENST00000511697 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.92□□□□□ -0.5
CALCOCO2-219ENST00000511697 SPATC1LQ9H0A9 340 aa11.92□□□□□ -0.5
CALCOCO2-219ENST00000511697 ARHGEF10LQ9HCE6 1279 aa11.92□□□□□ -0.5
CALCOCO2-219ENST00000511697 HOXC10Q9NYD6 342 aa11.92□□□□□ -0.5
CALCOCO2-219ENST00000511697 GTPBP6O43824 516 aaPredicted RBP11.91□□□□□ -0.5
CALCOCO2-219ENST00000511697 CYBAP13498 195 aa11.91□□□□□ -0.5
CALCOCO2-219ENST00000511697 ATP5JP18859 108 aa11.91□□□□□ -0.5
CALCOCO2-219ENST00000511697 CDK8P49336 464 aa11.91□□□□□ -0.5
CALCOCO2-219ENST00000511697 ANO1Q5XXA6 986 aa11.91□□□□□ -0.5
CALCOCO2-219ENST00000511697 Q7L0L9 218 aa11.91□□□□□ -0.5
CALCOCO2-219ENST00000511697 NCAPG2Q86XI2 1143 aa11.91□□□□□ -0.5
CALCOCO2-219ENST00000511697 AMOTL1Q8IY63 956 aa11.91□□□□□ -0.5
CALCOCO2-219ENST00000511697 ATG4CQ96DT6 458 aa11.91□□□□□ -0.5
CALCOCO2-219ENST00000511697 HAUS7Q99871 368 aa11.91□□□□□ -0.5
CALCOCO2-219ENST00000511697 ATP8A2Q9NTI2 1148 aa11.91□□□□□ -0.5
CALCOCO2-219ENST00000511697 SLC4A4Q9Y6R1 1079 aa11.91□□□□□ -0.5
CALCOCO2-219ENST00000511697 PLXNA1Q9UIW2 1896 aa11.91□□□□□ -0.5
CALCOCO2-219ENST00000511697 USP17L12C9JPN9 530 aa11.9□□□□□ -0.5
CALCOCO2-219ENST00000511697 USP17L21D6R901 530 aa11.9□□□□□ -0.5
CALCOCO2-219ENST00000511697 RAD21O60216 631 aa11.9□□□□□ -0.5
CALCOCO2-219ENST00000511697 SMARCA5O60264 1052 aaPredicted RBP11.9□□□□□ -0.5
CALCOCO2-219ENST00000511697 MSCO60682 206 aa11.9□□□□□ -0.5
CALCOCO2-219ENST00000511697 COBLO75128 1261 aa11.9□□□□□ -0.5
CALCOCO2-219ENST00000511697 GJC2Q5T442 439 aaPredicted RBP11.9□□□□□ -0.5
CALCOCO2-219ENST00000511697 SIAH1Q8IUQ4 282 aa11.9□□□□□ -0.5
CALCOCO2-219ENST00000511697 DEFB123Q8N688 67 aa11.9□□□□□ -0.5
CALCOCO2-219ENST00000511697 SLC17A8Q8NDX2 589 aa11.9□□□□□ -0.5
CALCOCO2-219ENST00000511697 LPAR1Q92633 364 aa11.9□□□□□ -0.5
CALCOCO2-219ENST00000511697 DDRGK1Q96HY6 314 aa11.9□□□□□ -0.5
CALCOCO2-219ENST00000511697 SH2D4AQ9H788 454 aa11.9□□□□□ -0.5
CALCOCO2-219ENST00000511697 VCPKMTQ9H867 229 aa11.9□□□□□ -0.5
CALCOCO2-219ENST00000511697 TMX2Q9Y320 296 aa11.9□□□□□ -0.5
CALCOCO2-219ENST00000511697 LTBP2Q14767 1821 aa11.9□□□□□ -0.5
CALCOCO2-219ENST00000511697 SMCHD1A6NHR9 2005 aa11.89□□□□□ -0.51
CALCOCO2-219ENST00000511697 DNM1LO00429 736 aa11.89□□□□□ -0.51
CALCOCO2-219ENST00000511697 STRNO43815 780 aa11.89□□□□□ -0.51
CALCOCO2-219ENST00000511697 EEF2P13639 858 aaKnown RBP11.89□□□□□ -0.51
CALCOCO2-219ENST00000511697 LRIT3Q3SXY7 679 aa11.89□□□□□ -0.51
CALCOCO2-219ENST00000511697 PRAMEF19Q5SWL8 479 aa11.89□□□□□ -0.51
CALCOCO2-219ENST00000511697 C20orf194Q5TEA3 1177 aa11.89□□□□□ -0.51
CALCOCO2-219ENST00000511697 C12orf60Q5U649 245 aa11.89□□□□□ -0.51
CALCOCO2-219ENST00000511697 OLFML2BQ68BL8 750 aa11.89□□□□□ -0.51
CALCOCO2-219ENST00000511697 C16orf86Q6ZW13 317 aa11.89□□□□□ -0.51
CALCOCO2-219ENST00000511697 STK11IPQ8N1F8 1099 aa11.89□□□□□ -0.51
CALCOCO2-219ENST00000511697 MB21D1Q8N884 522 aa11.89□□□□□ -0.51
CALCOCO2-219ENST00000511697 SHCBP1Q8NEM2 672 aa11.89□□□□□ -0.51
CALCOCO2-219ENST00000511697 LRRCC1Q9C099 1032 aa11.89□□□□□ -0.51
CALCOCO2-219ENST00000511697 PUS7LQ9H0K6 701 aaKnown RBP11.89□□□□□ -0.51
CALCOCO2-219ENST00000511697 RYDENQ9NUL5 291 aaKnown RBP11.89□□□□□ -0.51
CALCOCO2-219ENST00000511697 RCAN3Q9UKA8 241 aa11.89□□□□□ -0.51
CALCOCO2-219ENST00000511697 UNC80Q8N2C7 3258 aa11.89□□□□□ -0.51
CALCOCO2-219ENST00000511697 GREB1LQ9C091 1923 aaPredicted RBP11.88□□□□□ -0.51
CALCOCO2-219ENST00000511697 WDR46O15213 610 aaKnown RBP11.88□□□□□ -0.51
CALCOCO2-219ENST00000511697 IGHA2P01877 340 aa11.88□□□□□ -0.51
CALCOCO2-219ENST00000511697 TMEM132BQ14DG7 1078 aa11.88□□□□□ -0.51
CALCOCO2-219ENST00000511697 UBE3CQ15386 1083 aa11.88□□□□□ -0.51
CALCOCO2-219ENST00000511697 CTR9Q6PD62 1173 aa11.88□□□□□ -0.51
CALCOCO2-219ENST00000511697 CCDC17Q96LX7 622 aa11.88□□□□□ -0.51
CALCOCO2-219ENST00000511697 LBHD1Q9BQE6 289 aaPredicted RBP11.88□□□□□ -0.51
CALCOCO2-219ENST00000511697 CHMP4BQ9H444 224 aaKnown RBP11.88□□□□□ -0.51
CALCOCO2-219ENST00000511697 MROH8Q9H579 483 aa11.88□□□□□ -0.51
CALCOCO2-219ENST00000511697 FBXO28Q9NVF7 368 aa11.88□□□□□ -0.51
CALCOCO2-219ENST00000511697 SLC5A4Q9NY91 659 aa11.88□□□□□ -0.51
CALCOCO2-219ENST00000511697 TRPC6Q9Y210 931 aa11.88□□□□□ -0.51
CALCOCO2-219ENST00000511697 ATP11BQ9Y2G3 1177 aa11.88□□□□□ -0.51
CALCOCO2-219ENST00000511697 MYH4Q9Y623 1939 aa11.88□□□□□ -0.51
CALCOCO2-219ENST00000511697 KBTBD13C9JR72 458 aa11.87□□□□□ -0.51
CALCOCO2-219ENST00000511697 PGK2P07205 417 aa11.87□□□□□ -0.51
CALCOCO2-219ENST00000511697 FCER1AP12319 257 aa11.87□□□□□ -0.51
CALCOCO2-219ENST00000511697 RTP1P59025 263 aa11.87□□□□□ -0.51
CALCOCO2-219ENST00000511697 TSHZ3Q63HK5 1081 aa11.87□□□□□ -0.51
CALCOCO2-219ENST00000511697 ZSCAN25Q6NSZ9 544 aa11.87□□□□□ -0.51
CALCOCO2-219ENST00000511697 GPR153Q6NV75 609 aa11.87□□□□□ -0.51
CALCOCO2-219ENST00000511697 ARRDC4Q8NCT1 418 aa11.87□□□□□ -0.51
CALCOCO2-219ENST00000511697 MAML3Q96JK9 1138 aa11.87□□□□□ -0.51
CALCOCO2-219ENST00000511697 KANSL2Q9H9L4 492 aa11.87□□□□□ -0.51
CALCOCO2-219ENST00000511697 PRKAG2Q9UGJ0 569 aa11.87□□□□□ -0.51
CALCOCO2-219ENST00000511697 SEPT4O43236 478 aa11.86□□□□□ -0.51
CALCOCO2-219ENST00000511697 FAM47AQ5JRC9 791 aa11.86□□□□□ -0.51
CALCOCO2-219ENST00000511697 FAM83BQ5T0W9 1011 aa11.86□□□□□ -0.51
CALCOCO2-219ENST00000511697 ABRAQ8N0Z2 381 aa11.86□□□□□ -0.51
CALCOCO2-219ENST00000511697 EFCAB3Q8N7B9 438 aa11.86□□□□□ -0.51
CALCOCO2-219ENST00000511697 FERMT2Q96AC1 680 aa11.86□□□□□ -0.51
CALCOCO2-219ENST00000511697 MMP19Q99542 508 aa11.86□□□□□ -0.51
CALCOCO2-219ENST00000511697 NUP88Q99567 741 aaPredicted RBP11.86□□□□□ -0.51
CALCOCO2-219ENST00000511697 GOPCQ9HD26 462 aa11.86□□□□□ -0.51
CALCOCO2-219ENST00000511697 PRDM5Q9NQX1 630 aaPredicted RBP11.86□□□□□ -0.51
CALCOCO2-219ENST00000511697 ARPP21Q9UBL0 812 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms