RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 KIAA1755Q5JYT7 1200 aa6.38□□□□□ -1.39
PROM1-211ENST00000511153 GIMAP6Q6P9H5 292 aa6.38□□□□□ -1.39
PROM1-211ENST00000511153 GADL1Q6ZQY3 521 aa6.38□□□□□ -1.39
PROM1-211ENST00000511153 RALYLQ86SE5 291 aaKnown RBP6.38□□□□□ -1.39
PROM1-211ENST00000511153 SAPCD2Q86UD0 394 aa6.38□□□□□ -1.39
PROM1-211ENST00000511153 CCDC144CPQ8IYA2 1237 aa6.38□□□□□ -1.39
PROM1-211ENST00000511153 SCYL3Q8IZE3 742 aa6.38□□□□□ -1.39
PROM1-211ENST00000511153 PIBF1Q8WXW3 757 aa6.38□□□□□ -1.39
PROM1-211ENST00000511153 CEP95Q96GE4 821 aa6.38□□□□□ -1.39
PROM1-211ENST00000511153 NUP88Q99567 741 aaPredicted RBP6.38□□□□□ -1.39
PROM1-211ENST00000511153 FEZ1Q99689 392 aa6.38□□□□□ -1.39
PROM1-211ENST00000511153 MYL10Q9BUA6 226 aa6.38□□□□□ -1.39
PROM1-211ENST00000511153 KRTAP3-3Q9BYR6 98 aa6.38□□□□□ -1.39
PROM1-211ENST00000511153 KRTAP3-2Q9BYR7 98 aa6.38□□□□□ -1.39
PROM1-211ENST00000511153 CABP5Q9NP86 173 aa6.38□□□□□ -1.39
PROM1-211ENST00000511153 HERC5Q9UII4 1024 aaKnown RBP6.38□□□□□ -1.39
PROM1-211ENST00000511153 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.38□□□□□ -1.39
PROM1-211ENST00000511153 MYH4Q9Y623 1939 aa6.38□□□□□ -1.39
PROM1-211ENST00000511153 FRMPD2Q68DX3 1309 aaPredicted RBP6.37□□□□□ -1.39
PROM1-211ENST00000511153 PRC1O43663 620 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 EEF2P13639 858 aaKnown RBP6.37□□□□□ -1.39
PROM1-211ENST00000511153 TAL1P17542 331 aaPredicted RBP6.37□□□□□ -1.39
PROM1-211ENST00000511153 PTPRAP18433 802 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 MCCP23508 829 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 PBX2P40425 430 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 HMGCS2P54868 508 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 ANTXR2P58335 489 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 SNAP25P60880 206 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 LSM11P83369 360 aaKnown RBP eCLIP6.37□□□□□ -1.39
PROM1-211ENST00000511153 ICA1Q05084 483 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 TRDNQ13061 729 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 MTMR2Q13614 643 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 RGMBQ6NW40 437 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 TATDN1Q6P1N9 297 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 TMED8Q6PL24 325 aaPredicted RBP6.37□□□□□ -1.39
PROM1-211ENST00000511153 RASAL3Q86YV0 1011 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 ANKRD13AQ8IZ07 590 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 STAG1Q8WVM7 1258 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 WNK4Q96J92 1243 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 CAPNS2Q96L46 248 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 C22orf23Q9BZE7 217 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 EHD4Q9H223 541 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 SWAP70Q9UH65 585 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 ANAPC4Q9UJX5 808 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 STX8Q9UNK0 236 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 TLL2Q9Y6L7 1015 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 PHIPQ8WWQ0 1821 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 ROBO3Q96MS0 1386 aa6.37□□□□□ -1.39
PROM1-211ENST00000511153 TNKSO95271 1327 aa6.36□□□□□ -1.39
PROM1-211ENST00000511153 IFIT3O14879 490 aaKnown RBP6.36□□□□□ -1.39
PROM1-211ENST00000511153 CTNND1O60716 968 aaKnown RBP6.36□□□□□ -1.39
PROM1-211ENST00000511153 IGSF3O75054 1194 aa6.36□□□□□ -1.39
PROM1-211ENST00000511153 GOLGA8HP0CJ92 632 aa6.36□□□□□ -1.39
PROM1-211ENST00000511153 ZKSCAN1P17029 563 aaPredicted RBP6.36□□□□□ -1.39
PROM1-211ENST00000511153 SLC4A3P48751 1232 aa6.36□□□□□ -1.39
PROM1-211ENST00000511153 VEGFBP49765 207 aa6.36□□□□□ -1.39
PROM1-211ENST00000511153 FGD1P98174 961 aa6.36□□□□□ -1.39
PROM1-211ENST00000511153 STK3Q13188 491 aa6.36□□□□□ -1.39
PROM1-211ENST00000511153 DEFB115Q30KQ5 88 aa6.36□□□□□ -1.39
PROM1-211ENST00000511153 TMEM67Q5HYA8 995 aa6.36□□□□□ -1.39
PROM1-211ENST00000511153 LDLRAD1Q5T700 205 aa6.36□□□□□ -1.39
PROM1-211ENST00000511153 RNF20Q5VTR2 975 aa6.36□□□□□ -1.39
PROM1-211ENST00000511153 NFXL1Q6ZNB6 911 aa6.36□□□□□ -1.39
PROM1-211ENST00000511153 SIAH1Q8IUQ4 282 aa6.36□□□□□ -1.39
PROM1-211ENST00000511153 NCOA7Q8NI08 942 aa6.36□□□□□ -1.39
PROM1-211ENST00000511153 ESR2Q92731 530 aa6.36□□□□□ -1.39
PROM1-211ENST00000511153 HOOK2Q96ED9 719 aa6.36□□□□□ -1.39
PROM1-211ENST00000511153 NEK1Q96PY6 1258 aa6.36□□□□□ -1.39
PROM1-211ENST00000511153 UBAC1Q9BSL1 405 aa6.36□□□□□ -1.39
PROM1-211ENST00000511153 CPVLQ9H3G5 476 aa6.36□□□□□ -1.39
PROM1-211ENST00000511153 IL17RBQ9NRM6 502 aa6.36□□□□□ -1.39
PROM1-211ENST00000511153 RABGEF1Q9UJ41 708 aa6.36□□□□□ -1.39
PROM1-211ENST00000511153 ZNF112Q9UJU3 913 aa6.36□□□□□ -1.39
PROM1-211ENST00000511153 COL2A1P02458 1487 aaPredicted RBP6.36□□□□□ -1.39
PROM1-211ENST00000511153 USP17L5A8MUK1 530 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 ORC4O43929 436 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 HSPA6P17066 643 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 SLC16A2P36021 539 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 KIF23Q02241 960 aaPredicted RBP6.35□□□□□ -1.39
PROM1-211ENST00000511153 APOBRQ0VD83 1088 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 CCDC96Q2M329 555 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 TREML2Q5T2D2 321 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 SPRYD7Q5W111 196 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 ADGRD1Q6QNK2 874 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 BLOC1S2Q6QNY1 142 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 Q6ZUG5 572 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 TMEM179Q6ZVK1 233 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 METTL16Q86W50 562 aaKnown RBP6.35□□□□□ -1.39
PROM1-211ENST00000511153 TICAM2Q86XR7 235 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 MB21D2Q8IYB1 491 aaPredicted RBP6.35□□□□□ -1.39
PROM1-211ENST00000511153 ENAHQ8N8S7 591 aaPredicted RBP6.35□□□□□ -1.39
PROM1-211ENST00000511153 NEDD1Q8NHV4 660 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 NUP133Q8WUM0 1156 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 SLC4A5Q9BY07 1137 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 KRT23Q9C075 422 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 RNF41Q9H4P4 317 aaPredicted RBP6.35□□□□□ -1.39
PROM1-211ENST00000511153 GPCPD1Q9NPB8 672 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 BAZ2BQ9UIF8 2168 aaKnown RBP6.35□□□□□ -1.39
PROM1-211ENST00000511153 ZMYM6O95789 1325 aa6.35□□□□□ -1.39
PROM1-211ENST00000511153 WDR33Q9C0J8 1336 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms