RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 FAM126BQ8IXS8 530 aa16.79■□□□□ 0.28
HMGCR-208ENST00000509431 PCSK9Q8NBP7 692 aaKnown RBP16.79■□□□□ 0.28
HMGCR-208ENST00000509431 SH3RF3Q8TEJ3 882 aaPredicted RBP16.79■□□□□ 0.28
HMGCR-208ENST00000509431 TINF2Q9BSI4 451 aa16.79■□□□□ 0.28
HMGCR-208ENST00000509431 ZNF865P0CJ78 1059 aaPredicted RBP16.78■□□□□ 0.28
HMGCR-208ENST00000509431 ATP2A2P16615 1042 aaKnown RBP16.78■□□□□ 0.28
HMGCR-208ENST00000509431 ADORA1P30542 326 aa16.78■□□□□ 0.28
HMGCR-208ENST00000509431 CYP2C18P33260 490 aa16.78■□□□□ 0.28
HMGCR-208ENST00000509431 IL15P40933 162 aaPredicted RBP16.78■□□□□ 0.28
HMGCR-208ENST00000509431 EXOSC9Q06265 439 aaKnown RBP16.78■□□□□ 0.28
HMGCR-208ENST00000509431 NCAPG2Q86XI2 1143 aa16.78■□□□□ 0.28
HMGCR-208ENST00000509431 RPUSD2Q8IZ73 545 aaKnown RBP16.78■□□□□ 0.28
HMGCR-208ENST00000509431 CNPY2Q9Y2B0 182 aa16.78■□□□□ 0.28
HMGCR-208ENST00000509431 FLT1P17948 1338 aa16.77■□□□□ 0.28
HMGCR-208ENST00000509431 SSTR3P32745 418 aaPredicted RBP16.77■□□□□ 0.28
HMGCR-208ENST00000509431 VTI1AQ96AJ9 217 aa16.77■□□□□ 0.28
HMGCR-208ENST00000509431 SIL1Q9H173 461 aa16.77■□□□□ 0.28
HMGCR-208ENST00000509431 RAI14Q9P0K7 980 aa16.77■□□□□ 0.28
HMGCR-208ENST00000509431 DCXO43602 365 aa16.76■□□□□ 0.27
HMGCR-208ENST00000509431 SLC25A27O95847 323 aa16.76■□□□□ 0.27
HMGCR-208ENST00000509431 CD4P01730 458 aa16.76■□□□□ 0.27
HMGCR-208ENST00000509431 CA3P07451 260 aa16.76■□□□□ 0.27
HMGCR-208ENST00000509431 MVPQ14764 893 aaKnown RBP16.76■□□□□ 0.27
HMGCR-208ENST00000509431 RAB3GAP1Q15042 981 aa16.76■□□□□ 0.27
HMGCR-208ENST00000509431 KRT40Q6A162 431 aa16.76■□□□□ 0.27
HMGCR-208ENST00000509431 MAPKAPK5Q8IW41 473 aa16.76■□□□□ 0.27
HMGCR-208ENST00000509431 TGFBRAP1Q8WUH2 860 aa16.76■□□□□ 0.27
HMGCR-208ENST00000509431 LENG1Q96BZ8 264 aaPredicted RBP16.76■□□□□ 0.27
HMGCR-208ENST00000509431 HIPK3Q9H422 1215 aa16.76■□□□□ 0.27
HMGCR-208ENST00000509431 SPC25Q9HBM1 224 aa16.76■□□□□ 0.27
HMGCR-208ENST00000509431 LMCD1Q9NZU5 365 aa16.76■□□□□ 0.27
HMGCR-208ENST00000509431 FAM184BQ9ULE4 1060 aa16.76■□□□□ 0.27
HMGCR-208ENST00000509431 PALD1Q9ULE6 856 aa16.76■□□□□ 0.27
HMGCR-208ENST00000509431 ZBBXA8MT70 800 aa16.75■□□□□ 0.27
HMGCR-208ENST00000509431 DUSP11O75319 330 aaKnown RBP16.75■□□□□ 0.27
HMGCR-208ENST00000509431 TAL1P17542 331 aaPredicted RBP16.75■□□□□ 0.27
HMGCR-208ENST00000509431 PLS1Q14651 629 aa16.75■□□□□ 0.27
HMGCR-208ENST00000509431 TATDN1Q6P1N9 297 aa16.75■□□□□ 0.27
HMGCR-208ENST00000509431 MSL3Q8N5Y2 521 aaKnown RBP16.75■□□□□ 0.27
HMGCR-208ENST00000509431 MFSD14AQ96MC6 490 aa16.75■□□□□ 0.27
HMGCR-208ENST00000509431 USP44Q9H0E7 712 aa16.75■□□□□ 0.27
HMGCR-208ENST00000509431 EPOPA6NHQ4 379 aa16.74■□□□□ 0.27
HMGCR-208ENST00000509431 ASGR1P07306 291 aa16.74■□□□□ 0.27
HMGCR-208ENST00000509431 PFKMP08237 780 aa16.74■□□□□ 0.27
HMGCR-208ENST00000509431 PPP4CP60510 307 aa16.74■□□□□ 0.27
HMGCR-208ENST00000509431 LEXMQ3ZCV2 418 aa16.74■□□□□ 0.27
HMGCR-208ENST00000509431 ACER1Q8TDN7 264 aa16.74■□□□□ 0.27
HMGCR-208ENST00000509431 MMP19Q99542 508 aa16.74■□□□□ 0.27
HMGCR-208ENST00000509431 CABP5Q9NP86 173 aa16.74■□□□□ 0.27
HMGCR-208ENST00000509431 AATFQ9NY61 560 aaKnown RBP eCLIP16.74■□□□□ 0.27
HMGCR-208ENST00000509431 POTEB3A0JP26 581 aa16.73■□□□□ 0.27
HMGCR-208ENST00000509431 ZNF792Q3KQV3 632 aa16.73■□□□□ 0.27
HMGCR-208ENST00000509431 POTEBQ6S5H4 581 aa16.73■□□□□ 0.27
HMGCR-208ENST00000509431 SPATA5Q8NB90 893 aa16.73■□□□□ 0.27
HMGCR-208ENST00000509431 ARNTL2Q8WYA1 636 aa16.73■□□□□ 0.27
HMGCR-208ENST00000509431 SEZ6LQ9BYH1 1024 aa16.73■□□□□ 0.27
HMGCR-208ENST00000509431 TANGO6Q9C0B7 1094 aa16.73■□□□□ 0.27
HMGCR-208ENST00000509431 UBE2ZQ9H832 354 aaPredicted RBP16.73■□□□□ 0.27
HMGCR-208ENST00000509431 CERS4Q9HA82 394 aa16.73■□□□□ 0.27
HMGCR-208ENST00000509431 HMG20BQ9P0W2 317 aa16.73■□□□□ 0.27
HMGCR-208ENST00000509431 AKAP2Q9Y2D5 859 aa16.73■□□□□ 0.27
HMGCR-208ENST00000509431 C6orf222P0C671 652 aaPredicted RBP16.72■□□□□ 0.27
HMGCR-208ENST00000509431 PTPN5P54829 565 aa16.72■□□□□ 0.27
HMGCR-208ENST00000509431 TIMM10P62072 90 aa16.72■□□□□ 0.27
HMGCR-208ENST00000509431 GRB10Q13322 594 aa16.72■□□□□ 0.27
HMGCR-208ENST00000509431 ABCB5Q2M3G0 1257 aa16.72■□□□□ 0.27
HMGCR-208ENST00000509431 PUS10Q3MIT2 529 aaKnown RBP16.72■□□□□ 0.27
HMGCR-208ENST00000509431 CERKLQ49MI3 558 aaPredicted RBP16.72■□□□□ 0.27
HMGCR-208ENST00000509431 XAGE2Q96GT9 111 aa16.72■□□□□ 0.27
HMGCR-208ENST00000509431 SLC9A7Q96T83 725 aa16.72■□□□□ 0.27
HMGCR-208ENST00000509431 PRRX2Q99811 253 aa16.72■□□□□ 0.27
HMGCR-208ENST00000509431 LRP2BPQ9P2M1 347 aa16.72■□□□□ 0.27
HMGCR-208ENST00000509431 WDFY4Q6ZS81 3184 aa16.72■□□□□ 0.27
HMGCR-208ENST00000509431 MYH1P12882 1939 aa16.72■□□□□ 0.27
HMGCR-208ENST00000509431 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.71■□□□□ 0.27
HMGCR-208ENST00000509431 MYADML2A6NDP7 307 aa16.71■□□□□ 0.27
HMGCR-208ENST00000509431 DSG3P32926 999 aa16.71■□□□□ 0.27
HMGCR-208ENST00000509431 CCL23P55773 120 aa16.71■□□□□ 0.27
HMGCR-208ENST00000509431 TAP1Q03518 808 aa16.71■□□□□ 0.27
HMGCR-208ENST00000509431 KCTD2Q14681 263 aa16.71■□□□□ 0.27
HMGCR-208ENST00000509431 NAA16Q6N069 864 aaPredicted RBP16.71■□□□□ 0.27
HMGCR-208ENST00000509431 SAMD1Q6SPF0 538 aaPredicted RBP16.71■□□□□ 0.27
HMGCR-208ENST00000509431 TBC1D9Q6ZT07 1266 aa16.71■□□□□ 0.27
HMGCR-208ENST00000509431 PHOSPHO2Q8TCD6 241 aa16.71■□□□□ 0.27
HMGCR-208ENST00000509431 CDCA7LQ96GN5 454 aa16.71■□□□□ 0.27
HMGCR-208ENST00000509431 PHOX2BQ99453 314 aa16.71■□□□□ 0.27
HMGCR-208ENST00000509431 UPF3AQ9H1J1 476 aaKnown RBP16.71■□□□□ 0.27
HMGCR-208ENST00000509431 EHD4Q9H223 541 aa16.71■□□□□ 0.27
HMGCR-208ENST00000509431 A0A1B0GUL7 405 aa16.7■□□□□ 0.26
HMGCR-208ENST00000509431 KIF28PB7ZC32 967 aa16.7■□□□□ 0.26
HMGCR-208ENST00000509431 PGK2P07205 417 aa16.7■□□□□ 0.26
HMGCR-208ENST00000509431 COPB2P35606 906 aa16.7■□□□□ 0.26
HMGCR-208ENST00000509431 GJA9P57773 515 aa16.7■□□□□ 0.26
HMGCR-208ENST00000509431 WDR63Q8IWG1 891 aa16.7■□□□□ 0.26
HMGCR-208ENST00000509431 SLC43A3Q8NBI5 491 aa16.7■□□□□ 0.26
HMGCR-208ENST00000509431 NOC4LQ9BVI4 516 aaKnown RBP16.7■□□□□ 0.26
HMGCR-208ENST00000509431 SAP30BPQ9UHR5 308 aaKnown RBP16.7■□□□□ 0.26
HMGCR-208ENST00000509431 SERPINB13Q9UIV8 391 aa16.7■□□□□ 0.26
HMGCR-208ENST00000509431 ZNF536O15090 1300 aa16.7■□□□□ 0.26
HMGCR-208ENST00000509431 UMODL1Q5DID0 1318 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms