RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 EFEMP2O95967 443 aa6.06□□□□□ -1.44
NIPBL-206ENST00000509429 CANXP27824 592 aaKnown RBP6.06□□□□□ -1.44
NIPBL-206ENST00000509429 KRTAP10-9P60411 292 aa6.06□□□□□ -1.44
NIPBL-206ENST00000509429 PURAQ00577 322 aaKnown RBP6.06□□□□□ -1.44
NIPBL-206ENST00000509429 CCDC82Q8N4S0 544 aa6.06□□□□□ -1.44
NIPBL-206ENST00000509429 Q96M66 194 aa6.06□□□□□ -1.44
NIPBL-206ENST00000509429 LNPKQ9C0E8 428 aa6.06□□□□□ -1.44
NIPBL-206ENST00000509429 NPHS2Q9NP85 383 aa6.06□□□□□ -1.44
NIPBL-206ENST00000509429 TSC22D4Q9Y3Q8 395 aa6.06□□□□□ -1.44
NIPBL-206ENST00000509429 SDHBP21912 280 aa6.05□□□□□ -1.44
NIPBL-206ENST00000509429 NKG7Q16617 165 aa6.05□□□□□ -1.44
NIPBL-206ENST00000509429 VWA3BQ502W6 1294 aa6.05□□□□□ -1.44
NIPBL-206ENST00000509429 ADGRG2Q8IZP9 1017 aa6.05□□□□□ -1.44
NIPBL-206ENST00000509429 FNBP4Q8N3X1 1017 aaPredicted RBP6.05□□□□□ -1.44
NIPBL-206ENST00000509429 GPR62Q9BZJ7 368 aa6.05□□□□□ -1.44
NIPBL-206ENST00000509429 GZF1Q9H116 711 aaPredicted RBP6.05□□□□□ -1.44
NIPBL-206ENST00000509429 CCDC180Q9P1Z9 1646 aa6.05□□□□□ -1.44
NIPBL-206ENST00000509429 A0A1B0GTL3 188 aa6.04□□□□□ -1.44
NIPBL-206ENST00000509429 FZD6O60353 706 aa6.04□□□□□ -1.44
NIPBL-206ENST00000509429 NOBOXO60393 691 aa6.04□□□□□ -1.44
NIPBL-206ENST00000509429 CDH24Q86UP0 819 aa6.04□□□□□ -1.44
NIPBL-206ENST00000509429 KISS1RQ969F8 398 aaPredicted RBP6.04□□□□□ -1.44
NIPBL-206ENST00000509429 CBX8Q9HC52 389 aa6.04□□□□□ -1.44
NIPBL-206ENST00000509429 TRAK1Q9UPV9 953 aa6.04□□□□□ -1.44
NIPBL-206ENST00000509429 LOC102724159A0A0B4J2E5 919 aa6.03□□□□□ -1.44
NIPBL-206ENST00000509429 AMHP03971 560 aa6.03□□□□□ -1.44
NIPBL-206ENST00000509429 PNLIPP16233 465 aa6.03□□□□□ -1.44
NIPBL-206ENST00000509429 NCKAP1LP55160 1127 aa6.03□□□□□ -1.44
NIPBL-206ENST00000509429 PWP2Q15269 919 aaKnown RBP6.03□□□□□ -1.44
NIPBL-206ENST00000509429 TMC6Q7Z403 805 aa6.03□□□□□ -1.44
NIPBL-206ENST00000509429 TMTC2Q8N394 836 aa6.03□□□□□ -1.44
NIPBL-206ENST00000509429 RIPOR2Q9Y4F9 1068 aa6.03□□□□□ -1.44
NIPBL-206ENST00000509429 TRIM37O94972 964 aa6.02□□□□□ -1.45
NIPBL-206ENST00000509429 NPR3P17342 541 aa6.02□□□□□ -1.45
NIPBL-206ENST00000509429 ERVFRD-1P60508 538 aa6.02□□□□□ -1.45
NIPBL-206ENST00000509429 OS9Q13438 667 aaPredicted RBP6.02□□□□□ -1.45
NIPBL-206ENST00000509429 CDSNQ15517 529 aa6.02□□□□□ -1.45
NIPBL-206ENST00000509429 LRCH2Q5VUJ6 765 aa6.02□□□□□ -1.45
NIPBL-206ENST00000509429 DTHD1Q6ZMT9 781 aa6.02□□□□□ -1.45
NIPBL-206ENST00000509429 ELMO3Q96BJ8 720 aa6.02□□□□□ -1.45
NIPBL-206ENST00000509429 KLHL14Q9P2G3 628 aa6.02□□□□□ -1.45
NIPBL-206ENST00000509429 LTBP3Q9NS15 1303 aa6.01□□□□□ -1.45
NIPBL-206ENST00000509429 NRDCO43847 1150 aa6.01□□□□□ -1.45
NIPBL-206ENST00000509429 CST3P01034 146 aaPredicted RBP6.01□□□□□ -1.45
NIPBL-206ENST00000509429 IGFBP6P24592 240 aaPredicted RBP6.01□□□□□ -1.45
NIPBL-206ENST00000509429 TEKQ02763 1124 aa6.01□□□□□ -1.45
NIPBL-206ENST00000509429 FLIIQ13045 1269 aa6.01□□□□□ -1.45
NIPBL-206ENST00000509429 CDCP2Q5VXM1 449 aa6.01□□□□□ -1.45
NIPBL-206ENST00000509429 XAGE3Q8WTP9 111 aa6.01□□□□□ -1.45
NIPBL-206ENST00000509429 YTHDC1Q96MU7 727 aaKnown RBP6.01□□□□□ -1.45
NIPBL-206ENST00000509429 G6PC3Q9BUM1 346 aa6.01□□□□□ -1.45
NIPBL-206ENST00000509429 SUSD2Q9UGT4 822 aa6.01□□□□□ -1.45
NIPBL-206ENST00000509429 CLGNO14967 610 aa6□□□□□ -1.45
NIPBL-206ENST00000509429 MPOP05164 745 aa6□□□□□ -1.45
NIPBL-206ENST00000509429 LMO1P25800 156 aa6□□□□□ -1.45
NIPBL-206ENST00000509429 LIMS1P48059 325 aa6□□□□□ -1.45
NIPBL-206ENST00000509429 GJA9P57773 515 aa6□□□□□ -1.45
NIPBL-206ENST00000509429 FAM193AP78312 1265 aa6□□□□□ -1.45
NIPBL-206ENST00000509429 TMEM62Q0P6H9 643 aa6□□□□□ -1.45
NIPBL-206ENST00000509429 TMEM164Q5U3C3 297 aa6□□□□□ -1.45
NIPBL-206ENST00000509429 PRAMEF13Q5VWM6 474 aa6□□□□□ -1.45
NIPBL-206ENST00000509429 SPTY2D1Q68D10 685 aaPredicted RBP6□□□□□ -1.45
NIPBL-206ENST00000509429 ANKRD13AQ8IZ07 590 aa6□□□□□ -1.45
NIPBL-206ENST00000509429 PCDHA4Q9UN74 947 aa6□□□□□ -1.45
NIPBL-206ENST00000509429 LAS1LQ9Y4W2 734 aaKnown RBP6□□□□□ -1.45
NIPBL-206ENST00000509429 PRAMEF27A3QJZ7 478 aa5.99□□□□□ -1.45
NIPBL-206ENST00000509429 SH3D21A4FU49 640 aa5.99□□□□□ -1.45
NIPBL-206ENST00000509429 PLATP00750 562 aa5.99□□□□□ -1.45
NIPBL-206ENST00000509429 ATP2B4P23634 1241 aa5.99□□□□□ -1.45
NIPBL-206ENST00000509429 ETV3P41162 512 aa5.99□□□□□ -1.45
NIPBL-206ENST00000509429 SLC14A2Q15849 920 aa5.99□□□□□ -1.45
NIPBL-206ENST00000509429 HID1Q8IV36 788 aa5.99□□□□□ -1.45
NIPBL-206ENST00000509429 GTF3C2Q8WUA4 911 aaPredicted RBP5.99□□□□□ -1.45
NIPBL-206ENST00000509429 WNT10AQ9GZT5 417 aa5.99□□□□□ -1.45
NIPBL-206ENST00000509429 CHMP4BQ9H444 224 aaKnown RBP5.99□□□□□ -1.45
NIPBL-206ENST00000509429 CCDC87Q9NVE4 849 aa5.99□□□□□ -1.45
NIPBL-206ENST00000509429 ST6GALNAC2Q9UJ37 374 aa5.99□□□□□ -1.45
NIPBL-206ENST00000509429 ZNF281Q9Y2X9 895 aa5.99□□□□□ -1.45
NIPBL-206ENST00000509429 GADD45BO75293 160 aaPredicted RBP5.98□□□□□ -1.45
NIPBL-206ENST00000509429 FAM13AO94988 1023 aa5.98□□□□□ -1.45
NIPBL-206ENST00000509429 FAM50AQ14320 339 aaKnown RBP5.98□□□□□ -1.45
NIPBL-206ENST00000509429 NOL8Q76FK4 1167 aaKnown RBP5.98□□□□□ -1.45
NIPBL-206ENST00000509429 PROSER2Q86WR7 435 aaPredicted RBP5.98□□□□□ -1.45
NIPBL-206ENST00000509429 GRIN3AQ8TCU5 1115 aa5.98□□□□□ -1.45
NIPBL-206ENST00000509429 FNIP1Q8TF40 1166 aa5.98□□□□□ -1.45
NIPBL-206ENST00000509429 SGSM3Q96HU1 749 aa5.98□□□□□ -1.45
NIPBL-206ENST00000509429 SLAIN2Q9P270 581 aa5.98□□□□□ -1.45
NIPBL-206ENST00000509429 WDR33Q9C0J8 1336 aaKnown RBP5.98□□□□□ -1.45
NIPBL-206ENST00000509429 IRS2Q9Y4H2 1338 aa5.98□□□□□ -1.45
NIPBL-206ENST00000509429 USP2O75604 605 aaPredicted RBP5.97□□□□□ -1.45
NIPBL-206ENST00000509429 PFKLP17858 780 aa5.97□□□□□ -1.45
NIPBL-206ENST00000509429 MTMR3Q13615 1198 aa5.97□□□□□ -1.45
NIPBL-206ENST00000509429 FHL2Q14192 279 aa5.97□□□□□ -1.45
NIPBL-206ENST00000509429 GRM2Q14416 872 aa5.97□□□□□ -1.45
NIPBL-206ENST00000509429 TBC1D10BQ4KMP7 808 aaPredicted RBP5.97□□□□□ -1.45
NIPBL-206ENST00000509429 SAPCD2Q86UD0 394 aa5.97□□□□□ -1.45
NIPBL-206ENST00000509429 DLL4Q9NR61 685 aa5.97□□□□□ -1.45
NIPBL-206ENST00000509429 TACC3Q9Y6A5 838 aa5.97□□□□□ -1.45
NIPBL-206ENST00000509429 CPNE3O75131 537 aaKnown RBP5.96□□□□□ -1.46
NIPBL-206ENST00000509429 BRD1O95696 1058 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms