RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 KLF18A0A0U1RQI7 1052 aa17.33■□□□□ 0.36
RNF4-213ENST00000509388 ST18O60284 1047 aa17.33■□□□□ 0.36
RNF4-213ENST00000509388 PARP1P09874 1014 aaKnown RBP17.33■□□□□ 0.36
RNF4-213ENST00000509388 KIAA1755Q5JYT7 1200 aa17.33■□□□□ 0.36
RNF4-213ENST00000509388 SAMD1Q6SPF0 538 aaPredicted RBP17.33■□□□□ 0.36
RNF4-213ENST00000509388 SGMS1Q86VZ5 419 aa17.33■□□□□ 0.36
RNF4-213ENST00000509388 ZNF654Q8IZM8 581 aa17.33■□□□□ 0.36
RNF4-213ENST00000509388 FBXL16Q8N461 479 aa17.33■□□□□ 0.36
RNF4-213ENST00000509388 IL27Q8NEV9 243 aa17.33■□□□□ 0.36
RNF4-213ENST00000509388 CTCFLQ8NI51 663 aaPredicted RBP17.33■□□□□ 0.36
RNF4-213ENST00000509388 NUP88Q99567 741 aaPredicted RBP17.33■□□□□ 0.36
RNF4-213ENST00000509388 PTPN18Q99952 460 aa17.33■□□□□ 0.36
RNF4-213ENST00000509388 BEGAINQ9BUH8 593 aa17.33■□□□□ 0.36
RNF4-213ENST00000509388 SLC45A1Q9Y2W3 748 aa17.33■□□□□ 0.36
RNF4-213ENST00000509388 ZBTB43O43298 467 aa17.32■□□□□ 0.36
RNF4-213ENST00000509388 FLOT1O75955 427 aa17.32■□□□□ 0.36
RNF4-213ENST00000509388 DDAH1O94760 285 aa17.32■□□□□ 0.36
RNF4-213ENST00000509388 PDHBP11177 359 aa17.32■□□□□ 0.36
RNF4-213ENST00000509388 HOXA7P31268 230 aaPredicted RBP17.32■□□□□ 0.36
RNF4-213ENST00000509388 KIF5BP33176 963 aa17.32■□□□□ 0.36
RNF4-213ENST00000509388 APOBRQ0VD83 1088 aa17.32■□□□□ 0.36
RNF4-213ENST00000509388 MOGSQ13724 837 aa17.32■□□□□ 0.36
RNF4-213ENST00000509388 GPATCH4Q5T3I0 446 aaKnown RBP17.32■□□□□ 0.36
RNF4-213ENST00000509388 GPAT2Q6NUI2 795 aa17.32■□□□□ 0.36
RNF4-213ENST00000509388 CATSPERGQ6ZRH7 1159 aa17.32■□□□□ 0.36
RNF4-213ENST00000509388 FAM43AQ8N2R8 423 aa17.32■□□□□ 0.36
RNF4-213ENST00000509388 PARK7Q99497 189 aaKnown RBP17.32■□□□□ 0.36
RNF4-213ENST00000509388 KIF2CQ99661 725 aa17.32■□□□□ 0.36
RNF4-213ENST00000509388 ZCCHC17Q9NP64 241 aaKnown RBP17.32■□□□□ 0.36
RNF4-213ENST00000509388 GPCPD1Q9NPB8 672 aa17.32■□□□□ 0.36
RNF4-213ENST00000509388 FRMPD2Q68DX3 1309 aaPredicted RBP17.31■□□□□ 0.36
RNF4-213ENST00000509388 TMEM232C9JQI7 657 aa17.31■□□□□ 0.36
RNF4-213ENST00000509388 IGF2BP3O00425 579 aaKnown RBP eCLIP17.31■□□□□ 0.36
RNF4-213ENST00000509388 MAP2K1Q02750 393 aaPredicted RBP17.31■□□□□ 0.36
RNF4-213ENST00000509388 COG2Q14746 738 aa17.31■□□□□ 0.36
RNF4-213ENST00000509388 ASPRV1Q53RT3 343 aa17.31■□□□□ 0.36
RNF4-213ENST00000509388 KCTD1Q719H9 257 aa17.31■□□□□ 0.36
RNF4-213ENST00000509388 MICU3Q86XE3 530 aa17.31■□□□□ 0.36
RNF4-213ENST00000509388 SMCR8Q8TEV9 937 aaPredicted RBP17.31■□□□□ 0.36
RNF4-213ENST00000509388 CHURC1Q8WUH1 139 aa17.31■□□□□ 0.36
RNF4-213ENST00000509388 MYL10Q9BUA6 226 aa17.31■□□□□ 0.36
RNF4-213ENST00000509388 ALDH8A1Q9H2A2 487 aaPredicted RBP17.31■□□□□ 0.36
RNF4-213ENST00000509388 HOXC10Q9NYD6 342 aa17.31■□□□□ 0.36
RNF4-213ENST00000509388 FEM1BQ9UK73 627 aa17.31■□□□□ 0.36
RNF4-213ENST00000509388 GREB1LQ9C091 1923 aaPredicted RBP17.31■□□□□ 0.36
RNF4-213ENST00000509388 GOLGA8BA8MQT2 603 aa17.3■□□□□ 0.36
RNF4-213ENST00000509388 GOLGA8HP0CJ92 632 aa17.3■□□□□ 0.36
RNF4-213ENST00000509388 STAT2P52630 851 aa17.3■□□□□ 0.36
RNF4-213ENST00000509388 AK2P54819 239 aa17.3■□□□□ 0.36
RNF4-213ENST00000509388 ZNF543Q08ER8 600 aa17.3■□□□□ 0.36
RNF4-213ENST00000509388 TROAPQ12815 778 aa17.3■□□□□ 0.36
RNF4-213ENST00000509388 TOB2Q14106 344 aaPredicted RBP17.3■□□□□ 0.36
RNF4-213ENST00000509388 TAF1CQ15572 869 aaPredicted RBP17.3■□□□□ 0.36
RNF4-213ENST00000509388 APOA5Q6Q788 366 aa17.3■□□□□ 0.36
RNF4-213ENST00000509388 NOL8Q76FK4 1167 aaKnown RBP17.3■□□□□ 0.36
RNF4-213ENST00000509388 FAM160B2Q86V87 743 aa17.3■□□□□ 0.36
RNF4-213ENST00000509388 RAB11FIP4Q86YS3 637 aa17.3■□□□□ 0.36
RNF4-213ENST00000509388 DNAJC5GQ8N7S2 189 aa17.3■□□□□ 0.36
RNF4-213ENST00000509388 AGXT2Q9BYV1 514 aa17.3■□□□□ 0.36
RNF4-213ENST00000509388 ASCC2Q9H1I8 757 aaPredicted RBP17.3■□□□□ 0.36
RNF4-213ENST00000509388 ZFYVE28Q9HCC9 887 aa17.3■□□□□ 0.36
RNF4-213ENST00000509388 BRPF3Q9ULD4 1205 aa17.3■□□□□ 0.36
RNF4-213ENST00000509388 CTDP1Q9Y5B0 961 aaPredicted RBP17.3■□□□□ 0.36
RNF4-213ENST00000509388 GOLGA8AA7E2F4 631 aa17.29■□□□□ 0.36
RNF4-213ENST00000509388 DHX16O60231 1041 aaKnown RBP17.29■□□□□ 0.36
RNF4-213ENST00000509388 SNHG28P0DPA3 235 aa17.29■□□□□ 0.36
RNF4-213ENST00000509388 CYP2C8P10632 490 aa17.29■□□□□ 0.36
RNF4-213ENST00000509388 RXRAP19793 462 aa17.29■□□□□ 0.36
RNF4-213ENST00000509388 GNAQP50148 359 aa17.29■□□□□ 0.36
RNF4-213ENST00000509388 METAP2P50579 478 aaKnown RBP eCLIP17.29■□□□□ 0.36
RNF4-213ENST00000509388 GRM4Q14833 912 aa17.29■□□□□ 0.36
RNF4-213ENST00000509388 CCDC144CPQ8IYA2 1237 aa17.29■□□□□ 0.36
RNF4-213ENST00000509388 FANCBQ8NB91 859 aa17.29■□□□□ 0.36
RNF4-213ENST00000509388 KIFC2Q96AC6 838 aa17.29■□□□□ 0.36
RNF4-213ENST00000509388 MAP3K14Q99558 947 aa17.29■□□□□ 0.36
RNF4-213ENST00000509388 SLF1Q9BQI6 1058 aa17.29■□□□□ 0.36
RNF4-213ENST00000509388 LARP6Q9BRS8 491 aaKnown RBP17.29■□□□□ 0.36
RNF4-213ENST00000509388 CCDC196A0A1B0GTZ2 297 aa17.28■□□□□ 0.36
RNF4-213ENST00000509388 RCAN1P53805 252 aa17.28■□□□□ 0.36
RNF4-213ENST00000509388 PPP2R5BQ15173 497 aa17.28■□□□□ 0.36
RNF4-213ENST00000509388 RTN1Q16799 776 aa17.28■□□□□ 0.36
RNF4-213ENST00000509388 RASGRP2Q7LDG7 609 aa17.28■□□□□ 0.36
RNF4-213ENST00000509388 PRPF38AQ8NAV1 312 aaKnown RBP17.28■□□□□ 0.36
RNF4-213ENST00000509388 GTF3C2Q8WUA4 911 aaPredicted RBP17.28■□□□□ 0.36
RNF4-213ENST00000509388 P2RX7Q99572 595 aaKnown RBP17.28■□□□□ 0.36
RNF4-213ENST00000509388 RBM28Q9NW13 759 aaKnown RBP17.28■□□□□ 0.36
RNF4-213ENST00000509388 PHIPQ8WWQ0 1821 aa17.27■□□□□ 0.36
RNF4-213ENST00000509388 KLRF2D3W0D1 207 aa17.27■□□□□ 0.36
RNF4-213ENST00000509388 ZBED4O75132 1171 aa17.27■□□□□ 0.36
RNF4-213ENST00000509388 TRPA1O75762 1119 aa17.27■□□□□ 0.36
RNF4-213ENST00000509388 DSG3P32926 999 aa17.27■□□□□ 0.36
RNF4-213ENST00000509388 SLC16A2P36021 539 aa17.27■□□□□ 0.36
RNF4-213ENST00000509388 HERVK_113P62684 666 aa17.27■□□□□ 0.36
RNF4-213ENST00000509388 TTBK2Q6IQ55 1244 aa17.27■□□□□ 0.36
RNF4-213ENST00000509388 ZNF274Q96GC6 653 aaPredicted RBP17.27■□□□□ 0.36
RNF4-213ENST00000509388 LZTS2Q9BRK4 669 aa17.27■□□□□ 0.36
RNF4-213ENST00000509388 UBA5Q9GZZ9 404 aa17.27■□□□□ 0.36
RNF4-213ENST00000509388 FBXO28Q9NVF7 368 aa17.27■□□□□ 0.36
RNF4-213ENST00000509388 RNF186Q9NXI6 227 aa17.27■□□□□ 0.36
RNF4-213ENST00000509388 PPP1R9AQ9ULJ8 1098 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms