RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 NMT2O60551 498 aa10.36□□□□□ -0.75
PDLIM5-213ENST00000509357 HMGCRP04035 888 aa10.36□□□□□ -0.75
PDLIM5-213ENST00000509357 GJB1P08034 283 aa10.36□□□□□ -0.75
PDLIM5-213ENST00000509357 TSPY3P0CV98 308 aa10.36□□□□□ -0.75
PDLIM5-213ENST00000509357 TSPY8P0CW00 308 aa10.36□□□□□ -0.75
PDLIM5-213ENST00000509357 ZKSCAN1P17029 563 aaPredicted RBP10.36□□□□□ -0.75
PDLIM5-213ENST00000509357 RGS2P41220 211 aa10.36□□□□□ -0.75
PDLIM5-213ENST00000509357 RASGRP2Q7LDG7 609 aa10.36□□□□□ -0.75
PDLIM5-213ENST00000509357 GPR142Q7Z601 462 aa10.36□□□□□ -0.75
PDLIM5-213ENST00000509357 DEFB118Q96PH6 123 aa10.36□□□□□ -0.75
PDLIM5-213ENST00000509357 TOMM22Q9NS69 142 aa10.36□□□□□ -0.75
PDLIM5-213ENST00000509357 CLIP2Q9UDT6 1046 aa10.36□□□□□ -0.75
PDLIM5-213ENST00000509357 GJD2Q9UKL4 321 aa10.36□□□□□ -0.75
PDLIM5-213ENST00000509357 RBM8AQ9Y5S9 174 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-213ENST00000509357 CNMDO75829 334 aa10.35□□□□□ -0.75
PDLIM5-213ENST00000509357 GJA8P48165 433 aa10.35□□□□□ -0.75
PDLIM5-213ENST00000509357 TFAP4Q01664 338 aa10.35□□□□□ -0.75
PDLIM5-213ENST00000509357 NECTIN1Q15223 517 aa10.35□□□□□ -0.75
PDLIM5-213ENST00000509357 FAM47AQ5JRC9 791 aa10.35□□□□□ -0.75
PDLIM5-213ENST00000509357 POTEEQ6S8J3 1075 aa10.35□□□□□ -0.75
PDLIM5-213ENST00000509357 TRMT44Q8IYL2 757 aaKnown RBP10.35□□□□□ -0.75
PDLIM5-213ENST00000509357 RASEFQ8IZ41 740 aa10.35□□□□□ -0.75
PDLIM5-213ENST00000509357 MB21D1Q8N884 522 aa10.35□□□□□ -0.75
PDLIM5-213ENST00000509357 U2AF1L4Q8WU68 220 aaKnown RBP10.35□□□□□ -0.75
PDLIM5-213ENST00000509357 IL17RBQ9NRM6 502 aa10.35□□□□□ -0.75
PDLIM5-213ENST00000509357 BTBD7Q9P203 1132 aa10.35□□□□□ -0.75
PDLIM5-213ENST00000509357 CTDP1Q9Y5B0 961 aaPredicted RBP10.35□□□□□ -0.75
PDLIM5-213ENST00000509357 BRCA2P51587 3418 aa10.35□□□□□ -0.75
PDLIM5-213ENST00000509357 PLIN4Q96Q06 1357 aa10.35□□□□□ -0.75
PDLIM5-213ENST00000509357 A0A0G2JMZ2 1700 aa10.35□□□□□ -0.75
PDLIM5-213ENST00000509357 COL11A1P12107 1806 aaPredicted RBP10.35□□□□□ -0.75
PDLIM5-213ENST00000509357 RANBP6O60518 1105 aaKnown RBP10.34□□□□□ -0.75
PDLIM5-213ENST00000509357 DSG3P32926 999 aa10.34□□□□□ -0.75
PDLIM5-213ENST00000509357 MFAP1P55081 439 aaKnown RBP10.34□□□□□ -0.75
PDLIM5-213ENST00000509357 MAP2K5Q13163 448 aa10.34□□□□□ -0.75
PDLIM5-213ENST00000509357 FAM83BQ5T0W9 1011 aa10.34□□□□□ -0.75
PDLIM5-213ENST00000509357 LBX2Q6XYB7 198 aa10.34□□□□□ -0.75
PDLIM5-213ENST00000509357 DPP9Q86TI2 863 aa10.34□□□□□ -0.75
PDLIM5-213ENST00000509357 NCAPG2Q86XI2 1143 aa10.34□□□□□ -0.75
PDLIM5-213ENST00000509357 STAG1Q8WVM7 1258 aa10.34□□□□□ -0.75
PDLIM5-213ENST00000509357 DPF3Q92784 378 aa10.34□□□□□ -0.75
PDLIM5-213ENST00000509357 ATG4CQ96DT6 458 aa10.34□□□□□ -0.75
PDLIM5-213ENST00000509357 SPATC1LQ9H0A9 340 aa10.34□□□□□ -0.75
PDLIM5-213ENST00000509357 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.34□□□□□ -0.75
PDLIM5-213ENST00000509357 HMX1Q9NP08 348 aaPredicted RBP10.34□□□□□ -0.75
PDLIM5-213ENST00000509357 NYAP2Q9P242 653 aa10.34□□□□□ -0.75
PDLIM5-213ENST00000509357 SLC15A5A6NIM6 579 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 TSPY2A6NKD2 308 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 F5H6K3 240 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 SLC27A2O14975 620 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 SGPL1O95470 568 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 TTLL1O95922 423 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 XRCC5P13010 732 aaKnown RBP10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 PRKAR2AP13861 404 aaKnown RBP10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 ERCC3P19447 782 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 PTPREP23469 700 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 NOVP48745 357 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 SLC4A3P48751 1232 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 ANTXR2P58335 489 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 KLRC3Q07444 240 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 TRIM32Q13049 653 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 RRP12Q5JTH9 1297 aaKnown RBP10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 MORN1Q5T089 497 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 PRPF38BQ5VTL8 546 aaKnown RBP10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 MFSD14CQ5VZR4 134 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 RCSD1Q6JBY9 416 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 CYB5R4Q7L1T6 521 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 NEDD1Q8NHV4 660 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 TRIB2Q92519 343 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 CEP95Q96GE4 821 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 NUP88Q99567 741 aaPredicted RBP10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 APBA2Q99767 749 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 MOV10L1Q9BXT6 1211 aaKnown RBP10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 SENP2Q9HC62 589 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 MTMR4Q9NYA4 1195 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 RPTORQ8N122 1335 aa10.33□□□□□ -0.76
PDLIM5-213ENST00000509357 MKI67P46013 3256 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 B4E1Z4 1266 aa10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 STRNO43815 780 aa10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 ORC4O43929 436 aa10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 FARP2O94887 1054 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 NDUFB10O96000 172 aa10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 IKQ13123 557 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 CCL14Q16627 93 aa10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 ADCK5Q3MIX3 580 aa10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 PPP4R3BQ5MIZ7 849 aa10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 AKNAD1Q5T1N1 836 aa10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 CREB3L3Q68CJ9 461 aa10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 LRRC47Q8N1G4 583 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 SHCBP1Q8NEM2 672 aa10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 KCNB2Q92953 911 aa10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 KIFC2Q96AC6 838 aa10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 CHMP4CQ96CF2 233 aa10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 SHISA4Q96DD7 197 aa10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 SLF1Q9BQI6 1058 aa10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 MROH8Q9H579 483 aa10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 ANO2Q9NQ90 1003 aa10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 GPHNQ9NQX3 736 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 FBXO28Q9NVF7 368 aa10.32□□□□□ -0.76
PDLIM5-213ENST00000509357 SLC5A4Q9NY91 659 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms