RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 MX1P20591 662 aa13.07□□□□□ -0.32
RNF4-212ENST00000509258 CNGA1P29973 690 aa13.07□□□□□ -0.32
RNF4-212ENST00000509258 CYP2C19P33261 490 aa13.07□□□□□ -0.32
RNF4-212ENST00000509258 ANKRD45Q5TZF3 282 aa13.07□□□□□ -0.32
RNF4-212ENST00000509258 MB21D1Q8N884 522 aa13.07□□□□□ -0.32
RNF4-212ENST00000509258 NPLOC4Q8TAT6 608 aa13.07□□□□□ -0.32
RNF4-212ENST00000509258 ATG4CQ96DT6 458 aa13.07□□□□□ -0.32
RNF4-212ENST00000509258 MOV10L1Q9BXT6 1211 aaKnown RBP13.07□□□□□ -0.32
RNF4-212ENST00000509258 SH2D4AQ9H788 454 aa13.07□□□□□ -0.32
RNF4-212ENST00000509258 VCPKMTQ9H867 229 aa13.07□□□□□ -0.32
RNF4-212ENST00000509258 HOXC10Q9NYD6 342 aa13.07□□□□□ -0.32
RNF4-212ENST00000509258 MINDY4BA8MYZ0 360 aa13.06□□□□□ -0.32
RNF4-212ENST00000509258 STRNO43815 780 aa13.06□□□□□ -0.32
RNF4-212ENST00000509258 PRDM1O75626 825 aa13.06□□□□□ -0.32
RNF4-212ENST00000509258 CYBAP13498 195 aa13.06□□□□□ -0.32
RNF4-212ENST00000509258 ADORA2AP29274 412 aa13.06□□□□□ -0.32
RNF4-212ENST00000509258 MDM2Q00987 491 aaPredicted RBP13.06□□□□□ -0.32
RNF4-212ENST00000509258 HDAC1Q13547 482 aaPredicted RBP13.06□□□□□ -0.32
RNF4-212ENST00000509258 ZMYM1Q5SVZ6 1142 aa13.06□□□□□ -0.32
RNF4-212ENST00000509258 OLFML2BQ68BL8 750 aa13.06□□□□□ -0.32
RNF4-212ENST00000509258 DPP9Q86TI2 863 aa13.06□□□□□ -0.32
RNF4-212ENST00000509258 SHCBP1Q8NEM2 672 aa13.06□□□□□ -0.32
RNF4-212ENST00000509258 GPATCH3Q96I76 525 aa13.06□□□□□ -0.32
RNF4-212ENST00000509258 NUP88Q99567 741 aaPredicted RBP13.06□□□□□ -0.32
RNF4-212ENST00000509258 LBHD1Q9BQE6 289 aaPredicted RBP13.06□□□□□ -0.32
RNF4-212ENST00000509258 SENP6Q9GZR1 1112 aaPredicted RBP13.06□□□□□ -0.32
RNF4-212ENST00000509258 SPATC1LQ9H0A9 340 aa13.06□□□□□ -0.32
RNF4-212ENST00000509258 ARHGEF10LQ9HCE6 1279 aa13.06□□□□□ -0.32
RNF4-212ENST00000509258 SLC5A4Q9NY91 659 aa13.06□□□□□ -0.32
RNF4-212ENST00000509258 ARPP21Q9UBL0 812 aaPredicted RBP13.06□□□□□ -0.32
RNF4-212ENST00000509258 IGKV6D-41A0A0C4DH26 115 aa13.05□□□□□ -0.32
RNF4-212ENST00000509258 IGHA2P01877 340 aa13.05□□□□□ -0.32
RNF4-212ENST00000509258 IGHDP01880 384 aa13.05□□□□□ -0.32
RNF4-212ENST00000509258 ERCC3P19447 782 aa13.05□□□□□ -0.32
RNF4-212ENST00000509258 DSG3P32926 999 aa13.05□□□□□ -0.32
RNF4-212ENST00000509258 Q7L0L9 218 aa13.05□□□□□ -0.32
RNF4-212ENST00000509258 IFNL3Q8IZI9 196 aa13.05□□□□□ -0.32
RNF4-212ENST00000509258 TRPV1Q8NER1 839 aa13.05□□□□□ -0.32
RNF4-212ENST00000509258 EXOC6Q8TAG9 804 aa13.05□□□□□ -0.32
RNF4-212ENST00000509258 CCDC17Q96LX7 622 aa13.05□□□□□ -0.32
RNF4-212ENST00000509258 FSD1Q9BTV5 496 aa13.05□□□□□ -0.32
RNF4-212ENST00000509258 MROH8Q9H579 483 aa13.05□□□□□ -0.32
RNF4-212ENST00000509258 INCENPQ9NQS7 918 aa13.05□□□□□ -0.32
RNF4-212ENST00000509258 PRKAG2Q9UGJ0 569 aa13.05□□□□□ -0.32
RNF4-212ENST00000509258 STXBP5LQ9Y2K9 1186 aa13.05□□□□□ -0.32
RNF4-212ENST00000509258 A0A0C4DFX4 3053 aa13.05□□□□□ -0.32
RNF4-212ENST00000509258 LCTP09848 1927 aa13.05□□□□□ -0.32
RNF4-212ENST00000509258 LAMA4Q16363 1823 aa13.04□□□□□ -0.32
RNF4-212ENST00000509258 FLOT1O75955 427 aa13.04□□□□□ -0.32
RNF4-212ENST00000509258 ZFYP08048 801 aaPredicted RBP13.04□□□□□ -0.32
RNF4-212ENST00000509258 ATN1P54259 1190 aaPredicted RBP13.04□□□□□ -0.32
RNF4-212ENST00000509258 PDE1AP54750 535 aa13.04□□□□□ -0.32
RNF4-212ENST00000509258 VPS53Q5VIR6 699 aa13.04□□□□□ -0.32
RNF4-212ENST00000509258 GIMAP6Q6P9H5 292 aa13.04□□□□□ -0.32
RNF4-212ENST00000509258 SAMD1Q6SPF0 538 aaPredicted RBP13.04□□□□□ -0.32
RNF4-212ENST00000509258 ABRAQ8N0Z2 381 aa13.04□□□□□ -0.32
RNF4-212ENST00000509258 ARRDC4Q8NCT1 418 aa13.04□□□□□ -0.32
RNF4-212ENST00000509258 MTMR10Q9NXD2 777 aa13.04□□□□□ -0.32
RNF4-212ENST00000509258 KBTBD13C9JR72 458 aa13.03□□□□□ -0.32
RNF4-212ENST00000509258 ERC2O15083 957 aa13.03□□□□□ -0.32
RNF4-212ENST00000509258 WDR46O15213 610 aaKnown RBP13.03□□□□□ -0.32
RNF4-212ENST00000509258 SEPT4O43236 478 aa13.03□□□□□ -0.32
RNF4-212ENST00000509258 COBLO75128 1261 aa13.03□□□□□ -0.32
RNF4-212ENST00000509258 TDO2P48775 406 aa13.03□□□□□ -0.32
RNF4-212ENST00000509258 PLS1Q14651 629 aa13.03□□□□□ -0.32
RNF4-212ENST00000509258 TMEM132BQ14DG7 1078 aa13.03□□□□□ -0.32
RNF4-212ENST00000509258 FAM83BQ5T0W9 1011 aa13.03□□□□□ -0.32
RNF4-212ENST00000509258 NCAPG2Q86XI2 1143 aa13.03□□□□□ -0.32
RNF4-212ENST00000509258 REPS2Q8NFH8 660 aa13.03□□□□□ -0.32
RNF4-212ENST00000509258 LNPKQ9C0E8 428 aa13.03□□□□□ -0.32
RNF4-212ENST00000509258 KANSL2Q9H9L4 492 aa13.03□□□□□ -0.32
RNF4-212ENST00000509258 ADAMTS5Q9UNA0 930 aa13.03□□□□□ -0.32
RNF4-212ENST00000509258 A0A0D9SFI3 127 aa13.02□□□□□ -0.33
RNF4-212ENST00000509258 PATL2C9JE40 543 aaKnown RBP13.02□□□□□ -0.33
RNF4-212ENST00000509258 APPP05067 770 aa13.02□□□□□ -0.33
RNF4-212ENST00000509258 RTP1P59025 263 aa13.02□□□□□ -0.33
RNF4-212ENST00000509258 B4GALNT3Q6L9W6 998 aa13.02□□□□□ -0.33
RNF4-212ENST00000509258 RASGRP2Q7LDG7 609 aa13.02□□□□□ -0.33
RNF4-212ENST00000509258 SMC5Q8IY18 1101 aa13.02□□□□□ -0.33
RNF4-212ENST00000509258 CEP95Q96GE4 821 aa13.02□□□□□ -0.33
RNF4-212ENST00000509258 FAM227BQ96M60 508 aa13.02□□□□□ -0.33
RNF4-212ENST00000509258 NDUFB10O96000 172 aa13.01□□□□□ -0.33
RNF4-212ENST00000509258 FCER1AP12319 257 aa13.01□□□□□ -0.33
RNF4-212ENST00000509258 CTDSPL2Q05D32 466 aa13.01□□□□□ -0.33
RNF4-212ENST00000509258 FAM47AQ5JRC9 791 aa13.01□□□□□ -0.33
RNF4-212ENST00000509258 GJC2Q5T442 439 aaPredicted RBP13.01□□□□□ -0.33
RNF4-212ENST00000509258 LRRC47Q8N1G4 583 aaKnown RBP13.01□□□□□ -0.33
RNF4-212ENST00000509258 MAML3Q96JK9 1138 aa13.01□□□□□ -0.33
RNF4-212ENST00000509258 MKNK2Q9HBH9 465 aa13.01□□□□□ -0.33
RNF4-212ENST00000509258 ZNF214Q9UL59 606 aaPredicted RBP13.01□□□□□ -0.33
RNF4-212ENST00000509258 ATP11BQ9Y2G3 1177 aa13.01□□□□□ -0.33
RNF4-212ENST00000509258 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.01□□□□□ -0.33
RNF4-212ENST00000509258 PLIN4Q96Q06 1357 aa13□□□□□ -0.33
RNF4-212ENST00000509258 RAD21O60216 631 aa13□□□□□ -0.33
RNF4-212ENST00000509258 SLC25A27O95847 323 aa13□□□□□ -0.33
RNF4-212ENST00000509258 MYCNP04198 464 aaPredicted RBP13□□□□□ -0.33
RNF4-212ENST00000509258 GNAT2P19087 354 aa13□□□□□ -0.33
RNF4-212ENST00000509258 PPARAQ07869 468 aa13□□□□□ -0.33
RNF4-212ENST00000509258 SNX17Q15036 470 aa13□□□□□ -0.33
RNF4-212ENST00000509258 LRRFIP1Q32MZ4 808 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms