RNA–Protein interactions for RNA: ENST00000509177.1

TUSC3-208, Transcript of tumor suppressor candidate 3, humanhuman

TSL 2

Gene TUSC3, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-208ENST00000509177 HOXC10Q9NYD6 342 aa12.96□□□□□ -0.33
TUSC3-208ENST00000509177 M0R2C6 588 aa12.95□□□□□ -0.34
TUSC3-208ENST00000509177 CNMDO75829 334 aa12.95□□□□□ -0.34
TUSC3-208ENST00000509177 COG2Q14746 738 aa12.95□□□□□ -0.34
TUSC3-208ENST00000509177 B4GALNT3Q6L9W6 998 aa12.95□□□□□ -0.34
TUSC3-208ENST00000509177 SPICE1Q8N0Z3 855 aa12.95□□□□□ -0.34
TUSC3-208ENST00000509177 RNF39Q9H2S5 420 aa12.95□□□□□ -0.34
TUSC3-208ENST00000509177 KANSL2Q9H9L4 492 aa12.95□□□□□ -0.34
TUSC3-208ENST00000509177 ZNF287Q9HBT7 754 aa12.95□□□□□ -0.34
TUSC3-208ENST00000509177 FLRT1Q9NZU1 646 aa12.95□□□□□ -0.34
TUSC3-208ENST00000509177 PATL2C9JE40 543 aaKnown RBP12.94□□□□□ -0.34
TUSC3-208ENST00000509177 EEF2P13639 858 aaKnown RBP12.94□□□□□ -0.34
TUSC3-208ENST00000509177 SBK1Q52WX2 424 aa12.94□□□□□ -0.34
TUSC3-208ENST00000509177 FAM109BQ6ICB4 259 aaPredicted RBP12.94□□□□□ -0.34
TUSC3-208ENST00000509177 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.94□□□□□ -0.34
TUSC3-208ENST00000509177 ZNF444Q8N0Y2 327 aaPredicted RBP12.94□□□□□ -0.34
TUSC3-208ENST00000509177 LPAR1Q92633 364 aa12.94□□□□□ -0.34
TUSC3-208ENST00000509177 SEC62Q99442 399 aaKnown RBP12.94□□□□□ -0.34
TUSC3-208ENST00000509177 SENP6Q9GZR1 1112 aaPredicted RBP12.94□□□□□ -0.34
TUSC3-208ENST00000509177 GOPCQ9HD26 462 aa12.94□□□□□ -0.34
TUSC3-208ENST00000509177 TMX2Q9Y320 296 aa12.94□□□□□ -0.34
TUSC3-208ENST00000509177 IVNS1ABPQ9Y6Y0 642 aa12.94□□□□□ -0.34
TUSC3-208ENST00000509177 FRMPD3Q5JV73 1810 aa12.94□□□□□ -0.34
TUSC3-208ENST00000509177 MUC3AQ02505 3323 aa12.94□□□□□ -0.34
TUSC3-208ENST00000509177 SPDYE16A6NNV3 312 aaPredicted RBP12.93□□□□□ -0.34
TUSC3-208ENST00000509177 FLOT1O75955 427 aa12.93□□□□□ -0.34
TUSC3-208ENST00000509177 SLC3A2P08195 630 aaKnown RBP12.93□□□□□ -0.34
TUSC3-208ENST00000509177 PDE1AP54750 535 aa12.93□□□□□ -0.34
TUSC3-208ENST00000509177 MAP2K5Q13163 448 aa12.93□□□□□ -0.34
TUSC3-208ENST00000509177 PLS1Q14651 629 aa12.93□□□□□ -0.34
TUSC3-208ENST00000509177 ZMYM1Q5SVZ6 1142 aa12.93□□□□□ -0.34
TUSC3-208ENST00000509177 LBX2Q6XYB7 198 aa12.93□□□□□ -0.34
TUSC3-208ENST00000509177 IFNL3Q8IZI9 196 aa12.93□□□□□ -0.34
TUSC3-208ENST00000509177 EXOC6Q8TAG9 804 aa12.93□□□□□ -0.34
TUSC3-208ENST00000509177 EVI5LQ96CN4 794 aa12.93□□□□□ -0.34
TUSC3-208ENST00000509177 FAM161BQ96MY7 647 aa12.93□□□□□ -0.34
TUSC3-208ENST00000509177 LNPKQ9C0E8 428 aa12.93□□□□□ -0.34
TUSC3-208ENST00000509177 NAPBQ9H115 298 aa12.93□□□□□ -0.34
TUSC3-208ENST00000509177 VCPKMTQ9H867 229 aa12.93□□□□□ -0.34
TUSC3-208ENST00000509177 TRIM6-TRIM34B2RNG4 842 aa12.92□□□□□ -0.34
TUSC3-208ENST00000509177 WDR46O15213 610 aaKnown RBP12.92□□□□□ -0.34
TUSC3-208ENST00000509177 PRDM1O75626 825 aa12.92□□□□□ -0.34
TUSC3-208ENST00000509177 RASA1P20936 1047 aa12.92□□□□□ -0.34
TUSC3-208ENST00000509177 PDE4BQ07343 736 aa12.92□□□□□ -0.34
TUSC3-208ENST00000509177 SIAH1Q8IUQ4 282 aa12.92□□□□□ -0.34
TUSC3-208ENST00000509177 BTBD7Q9P203 1132 aa12.92□□□□□ -0.34
TUSC3-208ENST00000509177 MYH7P12883 1935 aa12.92□□□□□ -0.34
TUSC3-208ENST00000509177 BAZ2AQ9UIF9 1905 aaKnown RBP12.92□□□□□ -0.34
TUSC3-208ENST00000509177 SLC15A5A6NIM6 579 aa12.91□□□□□ -0.34
TUSC3-208ENST00000509177 IGHA2P01877 340 aa12.91□□□□□ -0.34
TUSC3-208ENST00000509177 PTPREP23469 700 aa12.91□□□□□ -0.34
TUSC3-208ENST00000509177 DSG3P32926 999 aa12.91□□□□□ -0.34
TUSC3-208ENST00000509177 ATN1P54259 1190 aaPredicted RBP12.91□□□□□ -0.34
TUSC3-208ENST00000509177 KIAA1755Q5JYT7 1200 aa12.91□□□□□ -0.34
TUSC3-208ENST00000509177 MFSD14CQ5VZR4 134 aa12.91□□□□□ -0.34
TUSC3-208ENST00000509177 MB21D1Q8N884 522 aa12.91□□□□□ -0.34
TUSC3-208ENST00000509177 TRPV1Q8NER1 839 aa12.91□□□□□ -0.34
TUSC3-208ENST00000509177 LBHD1Q9BQE6 289 aaPredicted RBP12.91□□□□□ -0.34
TUSC3-208ENST00000509177 EPB41L4AQ9HCS5 686 aaPredicted RBP12.91□□□□□ -0.34
TUSC3-208ENST00000509177 DDX20Q9UHI6 824 aaKnown RBP12.91□□□□□ -0.34
TUSC3-208ENST00000509177 SUPT16HQ9Y5B9 1047 aaKnown RBP12.91□□□□□ -0.34
TUSC3-208ENST00000509177 DNM1LO00429 736 aa12.9□□□□□ -0.34
TUSC3-208ENST00000509177 HOXC6P09630 235 aa12.9□□□□□ -0.34
TUSC3-208ENST00000509177 TSPY3P0CV98 308 aa12.9□□□□□ -0.34
TUSC3-208ENST00000509177 TSPY8P0CW00 308 aa12.9□□□□□ -0.34
TUSC3-208ENST00000509177 ATXN8OSP0DMR3 200 aa12.9□□□□□ -0.34
TUSC3-208ENST00000509177 CYP2C19P33261 490 aa12.9□□□□□ -0.34
TUSC3-208ENST00000509177 CCDC129Q6ZRS4 1044 aa12.9□□□□□ -0.34
TUSC3-208ENST00000509177 DPP9Q86TI2 863 aa12.9□□□□□ -0.34
TUSC3-208ENST00000509177 NPLOC4Q8TAT6 608 aa12.9□□□□□ -0.34
TUSC3-208ENST00000509177 RILPL2Q969X0 211 aa12.9□□□□□ -0.34
TUSC3-208ENST00000509177 ATG4CQ96DT6 458 aa12.9□□□□□ -0.34
TUSC3-208ENST00000509177 SPATC1LQ9H0A9 340 aa12.9□□□□□ -0.34
TUSC3-208ENST00000509177 CLIP2Q9UDT6 1046 aa12.9□□□□□ -0.34
TUSC3-208ENST00000509177 CTDP1Q9Y5B0 961 aaPredicted RBP12.9□□□□□ -0.34
TUSC3-208ENST00000509177 LTBP2Q14767 1821 aa12.9□□□□□ -0.34
TUSC3-208ENST00000509177 SALL3Q9BXA9 1300 aa12.89□□□□□ -0.35
TUSC3-208ENST00000509177 MSCO60682 206 aa12.89□□□□□ -0.35
TUSC3-208ENST00000509177 CNGA1P29973 690 aa12.89□□□□□ -0.35
TUSC3-208ENST00000509177 RTP1P59025 263 aa12.89□□□□□ -0.35
TUSC3-208ENST00000509177 PPARAQ07869 468 aa12.89□□□□□ -0.35
TUSC3-208ENST00000509177 GRB14Q14449 540 aa12.89□□□□□ -0.35
TUSC3-208ENST00000509177 FAM83BQ5T0W9 1011 aa12.89□□□□□ -0.35
TUSC3-208ENST00000509177 CHD1LQ86WJ1 897 aa12.89□□□□□ -0.35
TUSC3-208ENST00000509177 NCAPG2Q86XI2 1143 aa12.89□□□□□ -0.35
TUSC3-208ENST00000509177 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.89□□□□□ -0.35
TUSC3-208ENST00000509177 MOV10L1Q9BXT6 1211 aaKnown RBP12.89□□□□□ -0.35
TUSC3-208ENST00000509177 HELLSQ9NRZ9 838 aa12.89□□□□□ -0.35
TUSC3-208ENST00000509177 NYAP2Q9P242 653 aa12.89□□□□□ -0.35
TUSC3-208ENST00000509177 ISY1Q9ULR0 285 aaKnown RBP12.89□□□□□ -0.35
TUSC3-208ENST00000509177 TTC28Q96AY4 2481 aa12.89□□□□□ -0.35
TUSC3-208ENST00000509177 STRNO43815 780 aa12.88□□□□□ -0.35
TUSC3-208ENST00000509177 IGHDP01880 384 aa12.88□□□□□ -0.35
TUSC3-208ENST00000509177 CYBAP13498 195 aa12.88□□□□□ -0.35
TUSC3-208ENST00000509177 ERCC3P19447 782 aa12.88□□□□□ -0.35
TUSC3-208ENST00000509177 SHHQ15465 462 aa12.88□□□□□ -0.35
TUSC3-208ENST00000509177 GJC2Q5T442 439 aaPredicted RBP12.88□□□□□ -0.35
TUSC3-208ENST00000509177 ZNF697Q5TEC3 545 aa12.88□□□□□ -0.35
TUSC3-208ENST00000509177 SMC5Q8IY18 1101 aa12.88□□□□□ -0.35
TUSC3-208ENST00000509177 SHCBP1Q8NEM2 672 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms