RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 C12orf60Q5U649 245 aa12.74□□□□□ -0.37
COPS4-206ENST00000509093 KIAA0825Q8IV33 1275 aa12.74□□□□□ -0.37
COPS4-206ENST00000509093 ZFP91Q96JP5 570 aaPredicted RBP12.74□□□□□ -0.37
COPS4-206ENST00000509093 ZNF277Q9NRM2 450 aaPredicted RBP12.74□□□□□ -0.37
COPS4-206ENST00000509093 KIAA1468Q9P260 1216 aa12.74□□□□□ -0.37
COPS4-206ENST00000509093 ADAMTSL1Q8N6G6 1762 aa12.74□□□□□ -0.37
COPS4-206ENST00000509093 CCDC151A5D8V7 595 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 VWA3AA6NCI4 1184 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 GOLGA6L9A6NEM1 432 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 MAP2K7O14733 419 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 NMT2O60551 498 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 MAGEA9P43362 315 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 ME1P48163 572 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 TTC31Q49AM3 519 aaPredicted RBP12.73□□□□□ -0.37
COPS4-206ENST00000509093 CC2D2BQ6DHV5 1058 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 MICU3Q86XE3 530 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 SLC44A5Q8NCS7 719 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 ESR2Q92731 530 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 ERCC4Q92889 916 aaPredicted RBP12.73□□□□□ -0.37
COPS4-206ENST00000509093 SDF4Q9BRK5 362 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 PARD6BQ9BYG5 372 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 EPC1Q9H2F5 836 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 FAM217BQ9NTX9 383 aaPredicted RBP12.73□□□□□ -0.37
COPS4-206ENST00000509093 MRFAP1Q9Y605 127 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 A0A1W2PQ27 194 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 A0A1W2PQ64 194 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 A0A1W2PQD8 194 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 GUCY2CP25092 1073 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 POLD1P28340 1107 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 FANCCQ00597 558 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 GNL2Q13823 731 aaKnown RBP12.73□□□□□ -0.37
COPS4-206ENST00000509093 NCAPHQ15003 741 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 BRD3Q15059 726 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 SEC23AQ15436 765 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 LONRF2Q1L5Z9 754 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 SGMS1Q86VZ5 419 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 MSL3Q8N5Y2 521 aaKnown RBP12.73□□□□□ -0.37
COPS4-206ENST00000509093 GOLGA1Q92805 767 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 ZBTB9Q96C00 473 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 SUGT1Q9Y2Z0 365 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 FLT1P17948 1338 aa12.73□□□□□ -0.37
COPS4-206ENST00000509093 IKBKBO14920 756 aa12.72□□□□□ -0.37
COPS4-206ENST00000509093 CBFA2T2O43439 604 aa12.72□□□□□ -0.37
COPS4-206ENST00000509093 LIFRP42702 1097 aa12.72□□□□□ -0.37
COPS4-206ENST00000509093 NLRP12P59046 1061 aa12.72□□□□□ -0.37
COPS4-206ENST00000509093 WTAPQ15007 396 aa12.72□□□□□ -0.37
COPS4-206ENST00000509093 STRIP1Q5VSL9 837 aa12.72□□□□□ -0.37
COPS4-206ENST00000509093 SLF2Q8IX21 1173 aa12.72□□□□□ -0.37
COPS4-206ENST00000509093 SGIP1Q9BQI5 828 aa12.72□□□□□ -0.37
COPS4-206ENST00000509093 TNKSO95271 1327 aa12.72□□□□□ -0.37
COPS4-206ENST00000509093 COL4A5P29400 1685 aa12.72□□□□□ -0.37
COPS4-206ENST00000509093 KIF13BQ9NQT8 1826 aa12.72□□□□□ -0.37
COPS4-206ENST00000509093 USP17L3A6NCW0 530 aa12.72□□□□□ -0.37
COPS4-206ENST00000509093 USP17L4A6NCW7 530 aa12.72□□□□□ -0.37
COPS4-206ENST00000509093 ORC4O43929 436 aa12.72□□□□□ -0.37
COPS4-206ENST00000509093 METAP2P50579 478 aaKnown RBP eCLIP12.72□□□□□ -0.37
COPS4-206ENST00000509093 PICALMQ13492 652 aa12.72□□□□□ -0.37
COPS4-206ENST00000509093 APOBEC3HQ6NTF7 200 aaKnown RBP12.72□□□□□ -0.37
COPS4-206ENST00000509093 USP17L1Q7RTZ2 530 aa12.72□□□□□ -0.37
COPS4-206ENST00000509093 ENAHQ8N8S7 591 aaPredicted RBP12.72□□□□□ -0.37
COPS4-206ENST00000509093 SUPT20HQ8NEM7 779 aa12.72□□□□□ -0.37
COPS4-206ENST00000509093 ZSCAN10Q96SZ4 725 aaPredicted RBP12.72□□□□□ -0.37
COPS4-206ENST00000509093 UBAC1Q9BSL1 405 aa12.72□□□□□ -0.37
COPS4-206ENST00000509093 DDX4Q9NQI0 724 aaKnown RBP12.72□□□□□ -0.37
COPS4-206ENST00000509093 LAMB1P07942 1786 aa12.71□□□□□ -0.37
COPS4-206ENST00000509093 ARHGAP6O43182 974 aa12.71□□□□□ -0.37
COPS4-206ENST00000509093 ZBTB43O43298 467 aa12.71□□□□□ -0.37
COPS4-206ENST00000509093 POLR3DP05423 398 aaPredicted RBP12.71□□□□□ -0.37
COPS4-206ENST00000509093 TXLNAP40222 546 aa12.71□□□□□ -0.37
COPS4-206ENST00000509093 TGFB2P61812 414 aa12.71□□□□□ -0.37
COPS4-206ENST00000509093 ADALQ6DHV7 355 aa12.71□□□□□ -0.37
COPS4-206ENST00000509093 RTKN2Q8IZC4 609 aa12.71□□□□□ -0.37
COPS4-206ENST00000509093 USP40Q9NVE5 1235 aa12.71□□□□□ -0.37
COPS4-206ENST00000509093 PIM2Q9P1W9 311 aa12.71□□□□□ -0.37
COPS4-206ENST00000509093 PPP2R2CQ9Y2T4 447 aa12.71□□□□□ -0.37
COPS4-206ENST00000509093 JRKLQ9Y4A0 524 aa12.71□□□□□ -0.37
COPS4-206ENST00000509093 SLC12A7Q9Y666 1083 aa12.71□□□□□ -0.37
COPS4-206ENST00000509093 CDK5RAP2Q96SN8 1893 aa12.71□□□□□ -0.37
COPS4-206ENST00000509093 GOLGB1Q14789 3259 aaKnown RBP12.71□□□□□ -0.38
COPS4-206ENST00000509093 ZNF646O15015 1829 aaPredicted RBP12.71□□□□□ -0.38
COPS4-206ENST00000509093 GOLGA8AA7E2F4 631 aa12.71□□□□□ -0.38
COPS4-206ENST00000509093 UBE2Q2LH0YL09 131 aa12.71□□□□□ -0.38
COPS4-206ENST00000509093 WDHD1O75717 1129 aaPredicted RBP12.71□□□□□ -0.38
COPS4-206ENST00000509093 PLCG2P16885 1265 aa12.71□□□□□ -0.38
COPS4-206ENST00000509093 PTGER2P43116 358 aa12.71□□□□□ -0.38
COPS4-206ENST00000509093 CRKP46108 304 aa12.71□□□□□ -0.38
COPS4-206ENST00000509093 GUCY1B3Q02153 619 aa12.71□□□□□ -0.38
COPS4-206ENST00000509093 OTUD7BQ6GQQ9 843 aa12.71□□□□□ -0.38
COPS4-206ENST00000509093 CDC42EP5Q6NZY7 148 aa12.71□□□□□ -0.38
COPS4-206ENST00000509093 HNRNPLLQ8WVV9 542 aaKnown RBP12.71□□□□□ -0.38
COPS4-206ENST00000509093 MYCBPQ99417 103 aaPredicted RBP12.71□□□□□ -0.38
COPS4-206ENST00000509093 NCAPGQ9BPX3 1015 aa12.71□□□□□ -0.38
COPS4-206ENST00000509093 GJB4Q9NTQ9 266 aa12.71□□□□□ -0.38
COPS4-206ENST00000509093 PCDHA7Q9UN72 937 aa12.71□□□□□ -0.38
COPS4-206ENST00000509093 SART3Q15020 963 aaKnown RBP12.7□□□□□ -0.38
COPS4-206ENST00000509093 PACS2Q86VP3 889 aa12.7□□□□□ -0.38
COPS4-206ENST00000509093 TEKT1Q969V4 418 aa12.7□□□□□ -0.38
COPS4-206ENST00000509093 AIFM3Q96NN9 605 aa12.7□□□□□ -0.38
COPS4-206ENST00000509093 PSMD1Q99460 953 aa12.7□□□□□ -0.38
COPS4-206ENST00000509093 RTEL1Q9NZ71 1219 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms