RNA–Protein interactions for RNA: ENST00000509048.1

RETREG1-204, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-204ENST00000509048 ADORA2AP29274 412 aa27.39■■□□□ 1.98
RETREG1-204ENST00000509048 TMEM132BQ14DG7 1078 aa27.39■■□□□ 1.98
RETREG1-204ENST00000509048 FAM83BQ5T0W9 1011 aa27.39■■□□□ 1.98
RETREG1-204ENST00000509048 MFSD14CQ5VZR4 134 aa27.39■■□□□ 1.98
RETREG1-204ENST00000509048 LHX8Q68G74 356 aa27.39■■□□□ 1.98
RETREG1-204ENST00000509048 SMC5Q8IY18 1101 aa27.39■■□□□ 1.98
RETREG1-204ENST00000509048 ZNF444Q8N0Y2 327 aaPredicted RBP27.39■■□□□ 1.98
RETREG1-204ENST00000509048 PPP1R9AQ9ULJ8 1098 aa27.39■■□□□ 1.98
RETREG1-204ENST00000509048 COLQQ9Y215 455 aaPredicted RBP27.39■■□□□ 1.98
RETREG1-204ENST00000509048 PLIN4Q96Q06 1357 aa27.38■■□□□ 1.97
RETREG1-204ENST00000509048 PLS1Q14651 629 aa27.38■■□□□ 1.97
RETREG1-204ENST00000509048 ABRAQ8N0Z2 381 aa27.38■■□□□ 1.97
RETREG1-204ENST00000509048 NR2E3Q9Y5X4 410 aa27.38■■□□□ 1.97
RETREG1-204ENST00000509048 DNAH12Q6ZR08 3092 aa27.38■■□□□ 1.97
RETREG1-204ENST00000509048 VWA5AO00534 786 aa27.37■■□□□ 1.97
RETREG1-204ENST00000509048 PPARAQ07869 468 aa27.37■■□□□ 1.97
RETREG1-204ENST00000509048 SAMD1Q6SPF0 538 aaPredicted RBP27.37■■□□□ 1.97
RETREG1-204ENST00000509048 CCDC129Q6ZRS4 1044 aa27.37■■□□□ 1.97
RETREG1-204ENST00000509048 TICAM2Q86XR7 235 aa27.37■■□□□ 1.97
RETREG1-204ENST00000509048 MKL1Q969V6 931 aa27.37■■□□□ 1.97
RETREG1-204ENST00000509048 NBPF3Q9H094 633 aa27.37■■□□□ 1.97
RETREG1-204ENST00000509048 RWDD1Q9H446 243 aaPredicted RBP27.37■■□□□ 1.97
RETREG1-204ENST00000509048 MTMR4Q9NYA4 1195 aa27.37■■□□□ 1.97
RETREG1-204ENST00000509048 CLIP2Q9UDT6 1046 aa27.37■■□□□ 1.97
RETREG1-204ENST00000509048 SYNPO2Q9UMS6 1093 aa27.37■■□□□ 1.97
RETREG1-204ENST00000509048 COL11A1P12107 1806 aaPredicted RBP27.37■■□□□ 1.97
RETREG1-204ENST00000509048 F5H6K3 240 aa27.36■■□□□ 1.97
RETREG1-204ENST00000509048 RAD21O60216 631 aa27.36■■□□□ 1.97
RETREG1-204ENST00000509048 SLC25A27O95847 323 aa27.36■■□□□ 1.97
RETREG1-204ENST00000509048 PDE4BQ07343 736 aa27.36■■□□□ 1.97
RETREG1-204ENST00000509048 KLRC3Q07444 240 aa27.36■■□□□ 1.97
RETREG1-204ENST00000509048 OLFML2BQ68BL8 750 aa27.36■■□□□ 1.97
RETREG1-204ENST00000509048 DPP9Q86TI2 863 aa27.36■■□□□ 1.97
RETREG1-204ENST00000509048 NCAPG2Q86XI2 1143 aa27.36■■□□□ 1.97
RETREG1-204ENST00000509048 CEP95Q96GE4 821 aa27.36■■□□□ 1.97
RETREG1-204ENST00000509048 LNPKQ9C0E8 428 aa27.36■■□□□ 1.97
RETREG1-204ENST00000509048 EVI5O60447 810 aa27.35■■□□□ 1.97
RETREG1-204ENST00000509048 NDUFB10O96000 172 aa27.35■■□□□ 1.97
RETREG1-204ENST00000509048 SLC3A2P08195 630 aaKnown RBP27.35■■□□□ 1.97
RETREG1-204ENST00000509048 REPS2Q8NFH8 660 aa27.35■■□□□ 1.97
RETREG1-204ENST00000509048 NEDD1Q8NHV4 660 aa27.35■■□□□ 1.97
RETREG1-204ENST00000509048 HELLSQ9NRZ9 838 aa27.35■■□□□ 1.97
RETREG1-204ENST00000509048 ZNF214Q9UL59 606 aaPredicted RBP27.35■■□□□ 1.97
RETREG1-204ENST00000509048 ALPK3Q96L96 1907 aa27.35■■□□□ 1.97
RETREG1-204ENST00000509048 MYH4Q9Y623 1939 aa27.35■■□□□ 1.97
RETREG1-204ENST00000509048 COBLO75128 1261 aa27.34■■□□□ 1.97
RETREG1-204ENST00000509048 CYP2C19P33261 490 aa27.34■■□□□ 1.97
RETREG1-204ENST00000509048 RIOX2Q8IUF8 465 aa27.34■■□□□ 1.97
RETREG1-204ENST00000509048 NUP88Q99567 741 aaPredicted RBP27.34■■□□□ 1.97
RETREG1-204ENST00000509048 C11orf49Q9H6J7 331 aa27.34■■□□□ 1.97
RETREG1-204ENST00000509048 TRIOBPQ9H2D6 2365 aa27.33■■□□□ 1.97
RETREG1-204ENST00000509048 TTLL1O95922 423 aa27.33■■□□□ 1.97
RETREG1-204ENST00000509048 IGHDP01880 384 aa27.33■■□□□ 1.97
RETREG1-204ENST00000509048 EXOC6Q8TAG9 804 aa27.33■■□□□ 1.97
RETREG1-204ENST00000509048 SLF1Q9BQI6 1058 aa27.33■■□□□ 1.97
RETREG1-204ENST00000509048 SLC5A4Q9NY91 659 aa27.33■■□□□ 1.97
RETREG1-204ENST00000509048 TSPY3P0CV98 308 aa27.32■■□□□ 1.96
RETREG1-204ENST00000509048 TSPY8P0CW00 308 aa27.32■■□□□ 1.96
RETREG1-204ENST00000509048 FCER1AP12319 257 aa27.32■■□□□ 1.96
RETREG1-204ENST00000509048 STAT3P40763 770 aa27.32■■□□□ 1.96
RETREG1-204ENST00000509048 VPS53Q5VIR6 699 aa27.32■■□□□ 1.96
RETREG1-204ENST00000509048 CHRDL2Q6WN34 429 aa27.32■■□□□ 1.96
RETREG1-204ENST00000509048 GMCL1P1Q8NEA9 526 aa27.32■■□□□ 1.96
RETREG1-204ENST00000509048 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.32■■□□□ 1.96
RETREG1-204ENST00000509048 FRMPD3Q5JV73 1810 aa27.32■■□□□ 1.96
RETREG1-204ENST00000509048 COL6A1P12109 1028 aa27.31■■□□□ 1.96
RETREG1-204ENST00000509048 CYBAP13498 195 aa27.31■■□□□ 1.96
RETREG1-204ENST00000509048 TFAP4Q01664 338 aa27.31■■□□□ 1.96
RETREG1-204ENST00000509048 ALX1Q15699 326 aa27.31■■□□□ 1.96
RETREG1-204ENST00000509048 FAM47AQ5JRC9 791 aa27.31■■□□□ 1.96
RETREG1-204ENST00000509048 TRPV1Q8NER1 839 aa27.31■■□□□ 1.96
RETREG1-204ENST00000509048 FAM227BQ96M60 508 aa27.31■■□□□ 1.96
RETREG1-204ENST00000509048 DDX20Q9UHI6 824 aaKnown RBP27.31■■□□□ 1.96
RETREG1-204ENST00000509048 ANAPC4Q9UJX5 808 aa27.31■■□□□ 1.96
RETREG1-204ENST00000509048 PFASO15067 1338 aa27.31■■□□□ 1.96
RETREG1-204ENST00000509048 SZT2Q5T011 3432 aa27.3■■□□□ 1.96
RETREG1-204ENST00000509048 MSCO60682 206 aa27.3■■□□□ 1.96
RETREG1-204ENST00000509048 COPB2P35606 906 aa27.3■■□□□ 1.96
RETREG1-204ENST00000509048 NUCB1Q02818 461 aa27.3■■□□□ 1.96
RETREG1-204ENST00000509048 B4GALNT3Q6L9W6 998 aa27.3■■□□□ 1.96
RETREG1-204ENST00000509048 CHD1LQ86WJ1 897 aa27.3■■□□□ 1.96
RETREG1-204ENST00000509048 PRPF38AQ8NAV1 312 aaKnown RBP27.3■■□□□ 1.96
RETREG1-204ENST00000509048 PRO3102Q9H379 93 aa27.3■■□□□ 1.96
RETREG1-204ENST00000509048 A0A0D9SFI3 127 aa27.29■■□□□ 1.96
RETREG1-204ENST00000509048 MCMDC2Q4G0Z9 681 aa27.29■■□□□ 1.96
RETREG1-204ENST00000509048 LRRC47Q8N1G4 583 aaKnown RBP27.29■■□□□ 1.96
RETREG1-204ENST00000509048 MAML3Q96JK9 1138 aa27.29■■□□□ 1.96
RETREG1-204ENST00000509048 OSBPL3Q9H4L5 887 aa27.29■■□□□ 1.96
RETREG1-204ENST00000509048 LAMA3Q16787 3333 aa27.29■■□□□ 1.96
RETREG1-204ENST00000509048 ZNFX1Q9P2E3 1918 aaKnown RBP27.28■■□□□ 1.96
RETREG1-204ENST00000509048 CTDSPL2Q05D32 466 aa27.28■■□□□ 1.96
RETREG1-204ENST00000509048 MMP19Q99542 508 aa27.28■■□□□ 1.96
RETREG1-204ENST00000509048 TEX13BQ9BXU2 312 aa27.28■■□□□ 1.96
RETREG1-204ENST00000509048 ATP2A1O14983 1001 aa27.27■■□□□ 1.96
RETREG1-204ENST00000509048 CNGA1P29973 690 aa27.27■■□□□ 1.96
RETREG1-204ENST00000509048 FXR1P51114 621 aaKnown RBP eCLIP27.27■■□□□ 1.96
RETREG1-204ENST00000509048 PLEKHM2Q8IWE5 1019 aa27.27■■□□□ 1.96
RETREG1-204ENST00000509048 RBM27Q9P2N5 1060 aaKnown RBP27.27■■□□□ 1.96
RETREG1-204ENST00000509048 FEM1BQ9UK73 627 aa27.27■■□□□ 1.96
RETREG1-204ENST00000509048 TACC3Q9Y6A5 838 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms