RNA–Protein interactions for RNA: ENST00000508639.5

SIL1-210, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 675 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-210ENST00000508639 CNGA1P29973 690 aa12.66□□□□□ -0.38
SIL1-210ENST00000508639 ZNF792Q3KQV3 632 aa12.66□□□□□ -0.38
SIL1-210ENST00000508639 GPR153Q6NV75 609 aa12.66□□□□□ -0.38
SIL1-210ENST00000508639 SH3RF1Q7Z6J0 888 aa12.66□□□□□ -0.38
SIL1-210ENST00000508639 DPP9Q86TI2 863 aa12.66□□□□□ -0.38
SIL1-210ENST00000508639 CCDC17Q96LX7 622 aa12.66□□□□□ -0.38
SIL1-210ENST00000508639 NUP88Q99567 741 aaPredicted RBP12.66□□□□□ -0.38
SIL1-210ENST00000508639 UBE2OQ9C0C9 1292 aaKnown RBP12.66□□□□□ -0.38
SIL1-210ENST00000508639 DCTPP1Q9H773 170 aa12.66□□□□□ -0.38
SIL1-210ENST00000508639 ZNF214Q9UL59 606 aaPredicted RBP12.66□□□□□ -0.38
SIL1-210ENST00000508639 RIPK3Q9Y572 518 aa12.66□□□□□ -0.38
SIL1-210ENST00000508639 TACC3Q9Y6A5 838 aa12.66□□□□□ -0.38
SIL1-210ENST00000508639 SLC4A4Q9Y6R1 1079 aa12.66□□□□□ -0.38
SIL1-210ENST00000508639 PRUNE2Q8WUY3 3088 aa12.65□□□□□ -0.38
SIL1-210ENST00000508639 MCM3APO60318 1980 aa12.65□□□□□ -0.38
SIL1-210ENST00000508639 DNM1LO00429 736 aa12.65□□□□□ -0.38
SIL1-210ENST00000508639 VWA5AO00534 786 aa12.65□□□□□ -0.38
SIL1-210ENST00000508639 WDR46O15213 610 aaKnown RBP12.65□□□□□ -0.38
SIL1-210ENST00000508639 SEPT4O43236 478 aa12.65□□□□□ -0.38
SIL1-210ENST00000508639 MS4A1P11836 297 aa12.65□□□□□ -0.38
SIL1-210ENST00000508639 RTP1P59025 263 aa12.65□□□□□ -0.38
SIL1-210ENST00000508639 IRX5P78411 483 aaPredicted RBP12.65□□□□□ -0.38
SIL1-210ENST00000508639 SNX17Q15036 470 aa12.65□□□□□ -0.38
SIL1-210ENST00000508639 LRRC41Q15345 812 aa12.65□□□□□ -0.38
SIL1-210ENST00000508639 SBK1Q52WX2 424 aa12.65□□□□□ -0.38
SIL1-210ENST00000508639 SLC39A5Q6ZMH5 540 aa12.65□□□□□ -0.38
SIL1-210ENST00000508639 RIOX2Q8IUF8 465 aa12.65□□□□□ -0.38
SIL1-210ENST00000508639 ABRAQ8N0Z2 381 aa12.65□□□□□ -0.38
SIL1-210ENST00000508639 DEFB123Q8N688 67 aa12.65□□□□□ -0.38
SIL1-210ENST00000508639 OTUD7AQ8TE49 926 aaPredicted RBP12.65□□□□□ -0.38
SIL1-210ENST00000508639 SEC62Q99442 399 aaKnown RBP12.65□□□□□ -0.38
SIL1-210ENST00000508639 LRRCC1Q9C099 1032 aa12.65□□□□□ -0.38
SIL1-210ENST00000508639 IVNS1ABPQ9Y6Y0 642 aa12.65□□□□□ -0.38
SIL1-210ENST00000508639 TRIM43BA6NCK2 446 aa12.64□□□□□ -0.39
SIL1-210ENST00000508639 M0R2C6 588 aa12.64□□□□□ -0.39
SIL1-210ENST00000508639 FOXP2O15409 715 aa12.64□□□□□ -0.39
SIL1-210ENST00000508639 ZNF865P0CJ78 1059 aaPredicted RBP12.64□□□□□ -0.39
SIL1-210ENST00000508639 PLS1Q14651 629 aa12.64□□□□□ -0.39
SIL1-210ENST00000508639 FAM47AQ5JRC9 791 aa12.64□□□□□ -0.39
SIL1-210ENST00000508639 C9orf50Q5SZB4 431 aa12.64□□□□□ -0.39
SIL1-210ENST00000508639 FAM83BQ5T0W9 1011 aa12.64□□□□□ -0.39
SIL1-210ENST00000508639 NCAPG2Q86XI2 1143 aa12.64□□□□□ -0.39
SIL1-210ENST00000508639 STK11IPQ8N1F8 1099 aa12.64□□□□□ -0.39
SIL1-210ENST00000508639 MB21D1Q8N884 522 aa12.64□□□□□ -0.39
SIL1-210ENST00000508639 TRIM43Q96BQ3 446 aaPredicted RBP12.64□□□□□ -0.39
SIL1-210ENST00000508639 LENG1Q96BZ8 264 aaPredicted RBP12.64□□□□□ -0.39
SIL1-210ENST00000508639 FGD4Q96M96 766 aa12.64□□□□□ -0.39
SIL1-210ENST00000508639 MROH8Q9H579 483 aa12.64□□□□□ -0.39
SIL1-210ENST00000508639 KANSL2Q9H9L4 492 aa12.64□□□□□ -0.39
SIL1-210ENST00000508639 PPP1R9AQ9ULJ8 1098 aa12.64□□□□□ -0.39
SIL1-210ENST00000508639 PCDHB15Q9Y5E8 787 aa12.64□□□□□ -0.39
SIL1-210ENST00000508639 MYH4Q9Y623 1939 aa12.64□□□□□ -0.39
SIL1-210ENST00000508639 ADCY6O43306 1168 aa12.63□□□□□ -0.39
SIL1-210ENST00000508639 SNAI1O95863 264 aaPredicted RBP12.63□□□□□ -0.39
SIL1-210ENST00000508639 ADCYAP1R1P41586 468 aa12.63□□□□□ -0.39
SIL1-210ENST00000508639 SHHQ15465 462 aa12.63□□□□□ -0.39
SIL1-210ENST00000508639 SAMD1Q6SPF0 538 aaPredicted RBP12.63□□□□□ -0.39
SIL1-210ENST00000508639 KBTBD3Q8NAB2 608 aa12.63□□□□□ -0.39
SIL1-210ENST00000508639 FERMT2Q96AC1 680 aa12.63□□□□□ -0.39
SIL1-210ENST00000508639 GUCD1Q96NT3 240 aa12.63□□□□□ -0.39
SIL1-210ENST00000508639 ARHGEF10LQ9HCE6 1279 aa12.63□□□□□ -0.39
SIL1-210ENST00000508639 CWC22Q9HCG8 908 aaKnown RBP12.63□□□□□ -0.39
SIL1-210ENST00000508639 ECHDC1Q9NTX5 307 aa12.63□□□□□ -0.39
SIL1-210ENST00000508639 VCANP13611 3396 aa12.63□□□□□ -0.39
SIL1-210ENST00000508639 ROBO3Q96MS0 1386 aa12.62□□□□□ -0.39
SIL1-210ENST00000508639 DNAJC25-GNG10A0A024R161 153 aa12.62□□□□□ -0.39
SIL1-210ENST00000508639 MSCO60682 206 aa12.62□□□□□ -0.39
SIL1-210ENST00000508639 STAT3P40763 770 aa12.62□□□□□ -0.39
SIL1-210ENST00000508639 EPHB4P54760 987 aa12.62□□□□□ -0.39
SIL1-210ENST00000508639 TRIM60Q495X7 471 aa12.62□□□□□ -0.39
SIL1-210ENST00000508639 SLC17A8Q8NDX2 589 aa12.62□□□□□ -0.39
SIL1-210ENST00000508639 PI4K2BQ8TCG2 481 aa12.62□□□□□ -0.39
SIL1-210ENST00000508639 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.62□□□□□ -0.39
SIL1-210ENST00000508639 INCENPQ9NQS7 918 aa12.62□□□□□ -0.39
SIL1-210ENST00000508639 PDLIM7Q9NR12 457 aa12.62□□□□□ -0.39
SIL1-210ENST00000508639 NYAP2Q9P242 653 aa12.62□□□□□ -0.39
SIL1-210ENST00000508639 F5H6K3 240 aa12.61□□□□□ -0.39
SIL1-210ENST00000508639 RNF113AO15541 343 aaKnown RBP12.61□□□□□ -0.39
SIL1-210ENST00000508639 PRDM1O75626 825 aa12.61□□□□□ -0.39
SIL1-210ENST00000508639 NDUFB10O96000 172 aa12.61□□□□□ -0.39
SIL1-210ENST00000508639 PGK1P00558 417 aa12.61□□□□□ -0.39
SIL1-210ENST00000508639 FCER1AP12319 257 aa12.61□□□□□ -0.39
SIL1-210ENST00000508639 KLRC3Q07444 240 aa12.61□□□□□ -0.39
SIL1-210ENST00000508639 CCSAPQ6IQ19 270 aaPredicted RBP12.61□□□□□ -0.39
SIL1-210ENST00000508639 ARRDC4Q8NCT1 418 aa12.61□□□□□ -0.39
SIL1-210ENST00000508639 MKL1Q969V6 931 aa12.61□□□□□ -0.39
SIL1-210ENST00000508639 TINF2Q9BSI4 451 aa12.61□□□□□ -0.39
SIL1-210ENST00000508639 PHF24Q9UPV7 400 aa12.61□□□□□ -0.39
SIL1-210ENST00000508639 ATP11BQ9Y2G3 1177 aa12.61□□□□□ -0.39
SIL1-210ENST00000508639 STXBP5LQ9Y2K9 1186 aa12.61□□□□□ -0.39
SIL1-210ENST00000508639 SALL3Q9BXA9 1300 aa12.61□□□□□ -0.39
SIL1-210ENST00000508639 MYADML2A6NDP7 307 aa12.6□□□□□ -0.39
SIL1-210ENST00000508639 GPAA1O43292 621 aa12.6□□□□□ -0.39
SIL1-210ENST00000508639 ADAMTS4O75173 837 aa12.6□□□□□ -0.39
SIL1-210ENST00000508639 SLC25A27O95847 323 aa12.6□□□□□ -0.39
SIL1-210ENST00000508639 C1orf53Q5VUE5 145 aa12.6□□□□□ -0.39
SIL1-210ENST00000508639 GIMAP6Q6P9H5 292 aa12.6□□□□□ -0.39
SIL1-210ENST00000508639 APPBP2Q92624 585 aa12.6□□□□□ -0.39
SIL1-210ENST00000508639 BADQ92934 168 aa12.6□□□□□ -0.39
SIL1-210ENST00000508639 MMP19Q99542 508 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms