RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 ERCC3P19447 782 aa17.04■□□□□ 0.32
RAB28-205ENST00000508274 MNX1P50219 401 aaPredicted RBP17.04■□□□□ 0.32
RAB28-205ENST00000508274 TRMT44Q8IYL2 757 aaKnown RBP17.04■□□□□ 0.32
RAB28-205ENST00000508274 EVI5LQ96CN4 794 aa17.04■□□□□ 0.32
RAB28-205ENST00000508274 NUP88Q99567 741 aaPredicted RBP17.04■□□□□ 0.32
RAB28-205ENST00000508274 NAPBQ9H115 298 aa17.04■□□□□ 0.32
RAB28-205ENST00000508274 GOPCQ9HD26 462 aa17.04■□□□□ 0.32
RAB28-205ENST00000508274 IGKV6D-41A0A0C4DH26 115 aa17.03■□□□□ 0.32
RAB28-205ENST00000508274 IGHDP01880 384 aa17.03■□□□□ 0.32
RAB28-205ENST00000508274 ADORA2AP29274 412 aa17.03■□□□□ 0.32
RAB28-205ENST00000508274 TMEM132BQ14DG7 1078 aa17.03■□□□□ 0.32
RAB28-205ENST00000508274 VPS53Q5VIR6 699 aa17.03■□□□□ 0.32
RAB28-205ENST00000508274 B4GALNT3Q6L9W6 998 aa17.03■□□□□ 0.32
RAB28-205ENST00000508274 MB21D1Q8N884 522 aa17.03■□□□□ 0.32
RAB28-205ENST00000508274 NACAP1Q9BZK3 213 aa17.03■□□□□ 0.32
RAB28-205ENST00000508274 NYAP2Q9P242 653 aa17.03■□□□□ 0.32
RAB28-205ENST00000508274 HOXC6P09630 235 aa17.02■□□□□ 0.32
RAB28-205ENST00000508274 PPARAQ07869 468 aa17.02■□□□□ 0.32
RAB28-205ENST00000508274 HABP4Q5JVS0 413 aaKnown RBP17.02■□□□□ 0.32
RAB28-205ENST00000508274 NCAPG2Q86XI2 1143 aa17.02■□□□□ 0.32
RAB28-205ENST00000508274 SMC5Q8IY18 1101 aa17.02■□□□□ 0.32
RAB28-205ENST00000508274 ZNF444Q8N0Y2 327 aaPredicted RBP17.02■□□□□ 0.32
RAB28-205ENST00000508274 SHCBP1Q8NEM2 672 aa17.02■□□□□ 0.32
RAB28-205ENST00000508274 CEP95Q96GE4 821 aa17.02■□□□□ 0.32
RAB28-205ENST00000508274 OGDHLQ9ULD0 1010 aa17.02■□□□□ 0.32
RAB28-205ENST00000508274 ADAMTS5Q9UNA0 930 aa17.02■□□□□ 0.32
RAB28-205ENST00000508274 COLQQ9Y215 455 aaPredicted RBP17.02■□□□□ 0.32
RAB28-205ENST00000508274 NDUFB10O96000 172 aa17.02■□□□□ 0.31
RAB28-205ENST00000508274 AAMPQ13685 434 aa17.02■□□□□ 0.31
RAB28-205ENST00000508274 FAM47AQ5JRC9 791 aa17.02■□□□□ 0.31
RAB28-205ENST00000508274 FAM227BQ96M60 508 aa17.02■□□□□ 0.31
RAB28-205ENST00000508274 CLIP2Q9UDT6 1046 aa17.02■□□□□ 0.31
RAB28-205ENST00000508274 PPP1R9AQ9ULJ8 1098 aa17.02■□□□□ 0.31
RAB28-205ENST00000508274 PLIN4Q96Q06 1357 aa17.01■□□□□ 0.31
RAB28-205ENST00000508274 A0A0D9SFI3 127 aa17.01■□□□□ 0.31
RAB28-205ENST00000508274 COBLO75128 1261 aa17.01■□□□□ 0.31
RAB28-205ENST00000508274 CAPN2P17655 700 aa17.01■□□□□ 0.31
RAB28-205ENST00000508274 CYP2C19P33261 490 aa17.01■□□□□ 0.31
RAB28-205ENST00000508274 LHX8Q68G74 356 aa17.01■□□□□ 0.31
RAB28-205ENST00000508274 NECAB2Q7Z6G3 386 aa17.01■□□□□ 0.31
RAB28-205ENST00000508274 DPP9Q86TI2 863 aa17.01■□□□□ 0.31
RAB28-205ENST00000508274 LRRC47Q8N1G4 583 aaKnown RBP17.01■□□□□ 0.31
RAB28-205ENST00000508274 ANKLE1Q8NAG6 615 aa17.01■□□□□ 0.31
RAB28-205ENST00000508274 RWDD1Q9H446 243 aaPredicted RBP17.01■□□□□ 0.31
RAB28-205ENST00000508274 ZNF287Q9HBT7 754 aa17.01■□□□□ 0.31
RAB28-205ENST00000508274 INCENPQ9NQS7 918 aa17.01■□□□□ 0.31
RAB28-205ENST00000508274 MTMR4Q9NYA4 1195 aa17.01■□□□□ 0.31
RAB28-205ENST00000508274 TRIOBPQ9H2D6 2365 aa17.01■□□□□ 0.31
RAB28-205ENST00000508274 PLXNA1Q9UIW2 1896 aa17■□□□□ 0.31
RAB28-205ENST00000508274 F5H6K3 240 aa17■□□□□ 0.31
RAB28-205ENST00000508274 VWA5AO00534 786 aa17■□□□□ 0.31
RAB28-205ENST00000508274 STRNO43815 780 aa17■□□□□ 0.31
RAB28-205ENST00000508274 CTDSPL2Q05D32 466 aa17■□□□□ 0.31
RAB28-205ENST00000508274 KLRC3Q07444 240 aa17■□□□□ 0.31
RAB28-205ENST00000508274 MFSD14CQ5VZR4 134 aa17■□□□□ 0.31
RAB28-205ENST00000508274 REPS2Q8NFH8 660 aa17■□□□□ 0.31
RAB28-205ENST00000508274 ZNF214Q9UL59 606 aaPredicted RBP17■□□□□ 0.31
RAB28-205ENST00000508274 TACC3Q9Y6A5 838 aa17■□□□□ 0.31
RAB28-205ENST00000508274 IGHA2P01877 340 aa16.99■□□□□ 0.31
RAB28-205ENST00000508274 TSPY3P0CV98 308 aa16.99■□□□□ 0.31
RAB28-205ENST00000508274 TSPY8P0CW00 308 aa16.99■□□□□ 0.31
RAB28-205ENST00000508274 TFAP4Q01664 338 aa16.99■□□□□ 0.31
RAB28-205ENST00000508274 PDE4BQ07343 736 aa16.99■□□□□ 0.31
RAB28-205ENST00000508274 CHRDL2Q6WN34 429 aa16.99■□□□□ 0.31
RAB28-205ENST00000508274 TRPV1Q8NER1 839 aa16.99■□□□□ 0.31
RAB28-205ENST00000508274 NEDD1Q8NHV4 660 aa16.99■□□□□ 0.31
RAB28-205ENST00000508274 MROH8Q9H579 483 aa16.99■□□□□ 0.31
RAB28-205ENST00000508274 SUPT16HQ9Y5B9 1047 aaKnown RBP16.99■□□□□ 0.31
RAB28-205ENST00000508274 PFASO15067 1338 aa16.99■□□□□ 0.31
RAB28-205ENST00000508274 TRIM6-TRIM34B2RNG4 842 aa16.98■□□□□ 0.31
RAB28-205ENST00000508274 EVI5O60447 810 aa16.98■□□□□ 0.31
RAB28-205ENST00000508274 TTLL1O95922 423 aa16.98■□□□□ 0.31
RAB28-205ENST00000508274 ZNF589Q86UQ0 364 aaPredicted RBP16.98■□□□□ 0.31
RAB28-205ENST00000508274 CHD1LQ86WJ1 897 aa16.98■□□□□ 0.31
RAB28-205ENST00000508274 SLF1Q9BQI6 1058 aa16.98■□□□□ 0.31
RAB28-205ENST00000508274 NBPF3Q9H094 633 aa16.98■□□□□ 0.31
RAB28-205ENST00000508274 HELLSQ9NRZ9 838 aa16.98■□□□□ 0.31
RAB28-205ENST00000508274 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.98■□□□□ 0.31
RAB28-205ENST00000508274 SZT2Q5T011 3432 aa16.98■□□□□ 0.31
RAB28-205ENST00000508274 LAMA3Q16787 3333 aa16.98■□□□□ 0.31
RAB28-205ENST00000508274 SLC3A2P08195 630 aaKnown RBP16.98■□□□□ 0.31
RAB28-205ENST00000508274 CYBAP13498 195 aa16.98■□□□□ 0.31
RAB28-205ENST00000508274 CNGA1P29973 690 aa16.98■□□□□ 0.31
RAB28-205ENST00000508274 NUCB1Q02818 461 aa16.98■□□□□ 0.31
RAB28-205ENST00000508274 RIOX2Q8IUF8 465 aa16.98■□□□□ 0.31
RAB28-205ENST00000508274 MKL1Q969V6 931 aa16.98■□□□□ 0.31
RAB28-205ENST00000508274 RILPL2Q969X0 211 aa16.98■□□□□ 0.31
RAB28-205ENST00000508274 C11orf49Q9H6J7 331 aa16.98■□□□□ 0.31
RAB28-205ENST00000508274 NR2E3Q9Y5X4 410 aa16.98■□□□□ 0.31
RAB28-205ENST00000508274 SLC25A27O95847 323 aa16.97■□□□□ 0.31
RAB28-205ENST00000508274 FCER1AP12319 257 aa16.97■□□□□ 0.31
RAB28-205ENST00000508274 STAT3P40763 770 aa16.97■□□□□ 0.31
RAB28-205ENST00000508274 NMIQ13287 307 aaPredicted RBP16.97■□□□□ 0.31
RAB28-205ENST00000508274 OLFML2BQ68BL8 750 aa16.97■□□□□ 0.31
RAB28-205ENST00000508274 PLEKHM2Q8IWE5 1019 aa16.97■□□□□ 0.31
RAB28-205ENST00000508274 ABRAQ8N0Z2 381 aa16.97■□□□□ 0.31
RAB28-205ENST00000508274 CHMP4CQ96CF2 233 aa16.97■□□□□ 0.31
RAB28-205ENST00000508274 NMT2O60551 498 aa16.96■□□□□ 0.31
RAB28-205ENST00000508274 PGK2P07205 417 aa16.96■□□□□ 0.31
RAB28-205ENST00000508274 MCMDC2Q4G0Z9 681 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms