RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 TARSL2A2RTX5 802 aaKnown RBP5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 TRIM75PA6NK02 468 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 FER1L4A9Z1Z3 1794 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 TMEM232C9JQI7 657 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 MYO1CO00159 1063 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 IFIT3O14879 490 aaKnown RBP5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 POLR2DO15514 142 aaKnown RBP5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 GFRA3O60609 400 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 SASH3O75995 380 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 PCCAP05165 728 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 C4AP0C0L4 1744 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 C4BP0C0L5 1744 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 FDX1P10109 184 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 CAPN2P17655 700 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 ADKP55263 362 aaKnown RBP5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 LRRC24Q50LG9 513 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 HSP90AB3PQ58FF7 597 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 ZNF569Q5MCW4 686 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 BEND6Q5SZJ8 279 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 WDR93Q6P2C0 686 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 KIF6Q6ZMV9 814 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 MICU3Q86XE3 530 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 DIS3L2Q8IYB7 885 aaKnown RBP5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 RTL9Q8NET4 1388 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 SPATA20Q8TB22 786 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 SPIRE2Q8WWL2 714 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 PPM1EQ8WY54 764 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 HLA-CQ95604 372 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 AIDAQ96BJ3 306 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 SYTL4Q96C24 671 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 IQCDQ96DY2 449 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 SLC26A6Q9BXS9 759 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 TEX13AQ9BXU3 409 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 INTS13Q9NVM9 706 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 RMND1Q9NWS8 449 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 VPS18Q9P253 973 aa5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 FBXO2Q9UK22 296 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 PARP4Q9UKK3 1724 aaKnown RBP5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 RRP15Q9Y3B9 282 aaKnown RBP5.61□□□□□ -1.51
HMGB3P16-201ENST00000508037 KIF13AQ9H1H9 1805 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 DDX60Q8IY21 1712 aaKnown RBP5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 UBN2Q6ZU65 1347 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 CDHR2Q9BYE9 1310 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 PCDH11XQ9BZA7 1347 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 PCDH11YQ9BZA8 1340 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 FOXP2O15409 715 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 PPFIA3O75145 1194 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 IPO7O95373 1038 aaKnown RBP5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 CHGBP05060 677 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 MAGEA9P43362 315 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 ZAP70P43403 619 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 KRT83P78385 493 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 ST5P78524 1137 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 GUCA2AQ02747 115 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 PDE4BQ07343 736 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 MAP3K12Q12852 859 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 TCIRG1Q13488 830 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 CASP8Q14790 479 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 KARSQ15046 597 aaKnown RBP5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 NTRK3Q16288 839 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 RTN1Q16799 776 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 METTL24Q5JXM2 366 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 SLC9C2Q5TAH2 1124 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 NBPF14Q5TI25 921 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 CDKAL1Q5VV42 579 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 SPRYD7Q5W111 196 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 LIAT1Q6ZQX7 453 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 ZNF662Q6ZS27 426 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 MFSD6Q6ZSS7 791 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 SRLQ86TD4 932 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 ZNF598Q86UK7 904 aaKnown RBP5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 TBC1D10CQ8IV04 446 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 STK11IPQ8N1F8 1099 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 IGDCC4Q8TDY8 1250 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 AFAP1L1Q8TED9 768 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 NOC3LQ8WTT2 800 aaKnown RBP5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 CLIC6Q96NY7 704 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 ISCA1Q9BUE6 129 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 RNF26Q9BY78 433 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 TRIM34Q9BYJ4 488 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 PUS7LQ9H0K6 701 aaKnown RBP5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 NAPBQ9H115 298 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 HAUS4Q9H6D7 363 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 LY9Q9HBG7 655 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 PDE11AQ9HCR9 933 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 LZTFL1Q9NQ48 299 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 PRDM9Q9NQV7 894 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 ZNHIT6Q9NWK9 470 aaKnown RBP5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 ADD3Q9UEY8 706 aaKnown RBP5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 SERTAD1Q9UHV2 236 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 L1RE1Q9UN81 338 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 FCF1Q9Y324 198 aaKnown RBP5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 PKD1L3Q7Z443 1732 aa5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 TRPM3Q9HCF6 1732 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P16-201ENST00000508037 SETD1BQ9UPS6 1966 aaKnown RBP5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 A0A0G2JLW4 131 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 ANKRD18BA2A2Z9 1011 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 LRRC10BA6NIK2 292 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 SOWAHDA6NJG2 315 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 B4E1Z4 1266 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms