RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 CCDC96Q2M329 555 aa23.45■■□□□ 1.34
USP53-203ENST00000507597 ASPRV1Q53RT3 343 aa23.45■■□□□ 1.34
USP53-203ENST00000507597 FAM160B2Q86V87 743 aa23.45■■□□□ 1.34
USP53-203ENST00000507597 SPICE1Q8N0Z3 855 aa23.45■■□□□ 1.34
USP53-203ENST00000507597 CTCFLQ8NI51 663 aaPredicted RBP23.45■■□□□ 1.34
USP53-203ENST00000507597 NKX2-3Q8TAU0 364 aa23.45■■□□□ 1.34
USP53-203ENST00000507597 CHMP4CQ96CF2 233 aa23.45■■□□□ 1.34
USP53-203ENST00000507597 PARK7Q99497 189 aaKnown RBP23.45■■□□□ 1.34
USP53-203ENST00000507597 AGXT2Q9BYV1 514 aa23.45■■□□□ 1.34
USP53-203ENST00000507597 TANGO6Q9C0B7 1094 aa23.45■■□□□ 1.34
USP53-203ENST00000507597 FEM1BQ9UK73 627 aa23.45■■□□□ 1.34
USP53-203ENST00000507597 PHIPQ8WWQ0 1821 aa23.45■■□□□ 1.34
USP53-203ENST00000507597 PDHXO00330 501 aa23.44■■□□□ 1.34
USP53-203ENST00000507597 PARP1P09874 1014 aaKnown RBP23.44■■□□□ 1.34
USP53-203ENST00000507597 FDX1P10109 184 aa23.44■■□□□ 1.34
USP53-203ENST00000507597 GNAQP50148 359 aa23.44■■□□□ 1.34
USP53-203ENST00000507597 IKQ13123 557 aaPredicted RBP23.44■■□□□ 1.34
USP53-203ENST00000507597 CATSPERGQ6ZRH7 1159 aa23.44■■□□□ 1.34
USP53-203ENST00000507597 ZNF654Q8IZM8 581 aa23.44■■□□□ 1.34
USP53-203ENST00000507597 BRF1Q92994 677 aa23.44■■□□□ 1.34
USP53-203ENST00000507597 ZFYVE28Q9HCC9 887 aa23.44■■□□□ 1.34
USP53-203ENST00000507597 MTMR7Q9Y216 660 aa23.44■■□□□ 1.34
USP53-203ENST00000507597 MYPNQ86TC9 1320 aa23.43■■□□□ 1.34
USP53-203ENST00000507597 CCDC196A0A1B0GTZ2 297 aa23.43■■□□□ 1.34
USP53-203ENST00000507597 PLA2G6O60733 806 aa23.43■■□□□ 1.34
USP53-203ENST00000507597 PDHBP11177 359 aa23.43■■□□□ 1.34
USP53-203ENST00000507597 CPA1P15085 419 aa23.43■■□□□ 1.34
USP53-203ENST00000507597 COG2Q14746 738 aa23.43■■□□□ 1.34
USP53-203ENST00000507597 GPAT2Q6NUI2 795 aa23.43■■□□□ 1.34
USP53-203ENST00000507597 NUP133Q8WUM0 1156 aa23.43■■□□□ 1.34
USP53-203ENST00000507597 TCEANC2Q96MN5 208 aa23.43■■□□□ 1.34
USP53-203ENST00000507597 NAP1L2Q9ULW6 460 aaPredicted RBP23.43■■□□□ 1.34
USP53-203ENST00000507597 CTDP1Q9Y5B0 961 aaPredicted RBP23.43■■□□□ 1.34
USP53-203ENST00000507597 ZBTB43O43298 467 aa23.42■■□□□ 1.34
USP53-203ENST00000507597 CA12O43570 354 aa23.42■■□□□ 1.34
USP53-203ENST00000507597 STAT2P52630 851 aa23.42■■□□□ 1.34
USP53-203ENST00000507597 MOGSQ13724 837 aa23.42■■□□□ 1.34
USP53-203ENST00000507597 FAM83BQ5T0W9 1011 aa23.42■■□□□ 1.34
USP53-203ENST00000507597 SMCR8Q8TEV9 937 aaPredicted RBP23.42■■□□□ 1.34
USP53-203ENST00000507597 LZTS2Q9BRK4 669 aa23.42■■□□□ 1.34
USP53-203ENST00000507597 RBM28Q9NW13 759 aaKnown RBP23.42■■□□□ 1.34
USP53-203ENST00000507597 MYH4Q9Y623 1939 aa23.41■■□□□ 1.34
USP53-203ENST00000507597 KLF18A0A0U1RQI7 1052 aa23.41■■□□□ 1.34
USP53-203ENST00000507597 FLOT1O75955 427 aa23.41■■□□□ 1.34
USP53-203ENST00000507597 SNHG28P0DPA3 235 aa23.41■■□□□ 1.34
USP53-203ENST00000507597 MCM2P49736 904 aa23.41■■□□□ 1.34
USP53-203ENST00000507597 TAF1CQ15572 869 aaPredicted RBP23.41■■□□□ 1.34
USP53-203ENST00000507597 TREML2Q5T2D2 321 aa23.41■■□□□ 1.34
USP53-203ENST00000507597 DNAJC5GQ8N7S2 189 aa23.41■■□□□ 1.34
USP53-203ENST00000507597 PRPF38AQ8NAV1 312 aaKnown RBP23.41■■□□□ 1.34
USP53-203ENST00000507597 PTPN18Q99952 460 aa23.41■■□□□ 1.34
USP53-203ENST00000507597 TMEM232C9JQI7 657 aa23.4■■□□□ 1.34
USP53-203ENST00000507597 GCLCP48506 637 aaPredicted RBP23.4■■□□□ 1.34
USP53-203ENST00000507597 ZNF543Q08ER8 600 aa23.4■■□□□ 1.34
USP53-203ENST00000507597 TROAPQ12815 778 aa23.4■■□□□ 1.34
USP53-203ENST00000507597 APOA5Q6Q788 366 aa23.4■■□□□ 1.34
USP53-203ENST00000507597 FAM43AQ8N2R8 423 aa23.4■■□□□ 1.34
USP53-203ENST00000507597 ZNF274Q96GC6 653 aaPredicted RBP23.4■■□□□ 1.34
USP53-203ENST00000507597 ASCC2Q9H1I8 757 aaPredicted RBP23.4■■□□□ 1.34
USP53-203ENST00000507597 SAGE1Q9NXZ1 904 aa23.4■■□□□ 1.34
USP53-203ENST00000507597 CEP350Q5VT06 3117 aa23.4■■□□□ 1.34
USP53-203ENST00000507597 IGF2BP3O00425 579 aaKnown RBP eCLIP23.39■■□□□ 1.33
USP53-203ENST00000507597 GRM4Q14833 912 aa23.39■■□□□ 1.33
USP53-203ENST00000507597 MB21D1Q8N884 522 aa23.39■■□□□ 1.33
USP53-203ENST00000507597 ZIC5Q96T25 663 aa23.39■■□□□ 1.33
USP53-203ENST00000507597 SLF1Q9BQI6 1058 aa23.39■■□□□ 1.33
USP53-203ENST00000507597 PNMA2Q9UL42 364 aa23.39■■□□□ 1.33
USP53-203ENST00000507597 DHX16O60231 1041 aaKnown RBP23.38■■□□□ 1.33
USP53-203ENST00000507597 ZBED4O75132 1171 aa23.38■■□□□ 1.33
USP53-203ENST00000507597 METAP2P50579 478 aaKnown RBP eCLIP23.38■■□□□ 1.33
USP53-203ENST00000507597 EVCP57679 992 aa23.38■■□□□ 1.33
USP53-203ENST00000507597 APOBRQ0VD83 1088 aa23.38■■□□□ 1.33
USP53-203ENST00000507597 KIAA1755Q5JYT7 1200 aa23.38■■□□□ 1.33
USP53-203ENST00000507597 CPLX2Q6PUV4 134 aaKnown RBP23.38■■□□□ 1.33
USP53-203ENST00000507597 KCTD1Q719H9 257 aa23.38■■□□□ 1.33
USP53-203ENST00000507597 FANCBQ8NB91 859 aa23.38■■□□□ 1.33
USP53-203ENST00000507597 KIF2CQ99661 725 aa23.38■■□□□ 1.33
USP53-203ENST00000507597 GPCPD1Q9NPB8 672 aa23.38■■□□□ 1.33
USP53-203ENST00000507597 GPHNQ9NQX3 736 aaPredicted RBP23.38■■□□□ 1.33
USP53-203ENST00000507597 GOLGA8AA7E2F4 631 aa23.37■■□□□ 1.33
USP53-203ENST00000507597 GOLGA8BA8MQT2 603 aa23.37■■□□□ 1.33
USP53-203ENST00000507597 SMARCA1P28370 1054 aa23.37■■□□□ 1.33
USP53-203ENST00000507597 DSG3P32926 999 aa23.37■■□□□ 1.33
USP53-203ENST00000507597 AK2P54819 239 aa23.37■■□□□ 1.33
USP53-203ENST00000507597 DGKZQ13574 1117 aa23.37■■□□□ 1.33
USP53-203ENST00000507597 TOB2Q14106 344 aaPredicted RBP23.37■■□□□ 1.33
USP53-203ENST00000507597 BTNL9Q6UXG8 535 aa23.37■■□□□ 1.33
USP53-203ENST00000507597 MICU3Q86XE3 530 aa23.37■■□□□ 1.33
USP53-203ENST00000507597 ZSCAN31Q96LW9 406 aaPredicted RBP23.37■■□□□ 1.33
USP53-203ENST00000507597 NUP88Q99567 741 aaPredicted RBP23.37■■□□□ 1.33
USP53-203ENST00000507597 PPP1R9AQ9ULJ8 1098 aa23.37■■□□□ 1.33
USP53-203ENST00000507597 LOC285556D6RIA3 1793 aa23.37■■□□□ 1.33
USP53-203ENST00000507597 KLRF2D3W0D1 207 aa23.36■■□□□ 1.33
USP53-203ENST00000507597 HERVK_113P62684 666 aa23.36■■□□□ 1.33
USP53-203ENST00000507597 TRAF1Q13077 416 aa23.36■■□□□ 1.33
USP53-203ENST00000507597 RTN1Q16799 776 aa23.36■■□□□ 1.33
USP53-203ENST00000507597 IFFO2Q5TF58 517 aa23.36■■□□□ 1.33
USP53-203ENST00000507597 LBX2Q6XYB7 198 aa23.36■■□□□ 1.33
USP53-203ENST00000507597 CFHR5Q9BXR6 569 aa23.36■■□□□ 1.33
USP53-203ENST00000507597 SENP2Q9HC62 589 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms