RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 RNPC3Q96LT9 517 aaKnown RBP19.93■□□□□ 0.78
SNF8-205ENST00000507302 TINF2Q9BSI4 451 aa19.93■□□□□ 0.78
SNF8-205ENST00000507302 GREB1LQ9C091 1923 aaPredicted RBP19.93■□□□□ 0.78
SNF8-205ENST00000507302 BAZ2AQ9UIF9 1905 aaKnown RBP19.93■□□□□ 0.78
SNF8-205ENST00000507302 A0A1W2PQ45 241 aaPredicted RBP19.92■□□□□ 0.78
SNF8-205ENST00000507302 A0A1W2PQY0 241 aa19.92■□□□□ 0.78
SNF8-205ENST00000507302 MPHOSPH10O00566 681 aaKnown RBP19.92■□□□□ 0.78
SNF8-205ENST00000507302 RNF180Q86T96 592 aa19.92■□□□□ 0.78
SNF8-205ENST00000507302 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.92■□□□□ 0.78
SNF8-205ENST00000507302 TSEN34Q9BSV6 310 aaKnown RBP19.92■□□□□ 0.78
SNF8-205ENST00000507302 FAAP100Q0VG06 881 aa19.91■□□□□ 0.78
SNF8-205ENST00000507302 GRIN2CQ14957 1233 aa19.91■□□□□ 0.78
SNF8-205ENST00000507302 SLC9C2Q5TAH2 1124 aa19.91■□□□□ 0.78
SNF8-205ENST00000507302 CCSAPQ6IQ19 270 aaPredicted RBP19.91■□□□□ 0.78
SNF8-205ENST00000507302 CEP85Q6P2H3 762 aa19.91■□□□□ 0.78
SNF8-205ENST00000507302 ERC1Q8IUD2 1116 aa19.91■□□□□ 0.78
SNF8-205ENST00000507302 REPS2Q8NFH8 660 aa19.91■□□□□ 0.78
SNF8-205ENST00000507302 SDR42E1Q8WUS8 393 aa19.91■□□□□ 0.78
SNF8-205ENST00000507302 SH2D4AQ9H788 454 aa19.91■□□□□ 0.78
SNF8-205ENST00000507302 ARHGEF10LQ9HCE6 1279 aa19.91■□□□□ 0.78
SNF8-205ENST00000507302 ZNF214Q9UL59 606 aaPredicted RBP19.91■□□□□ 0.78
SNF8-205ENST00000507302 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.9■□□□□ 0.78
SNF8-205ENST00000507302 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.9■□□□□ 0.78
SNF8-205ENST00000507302 PGK1P00558 417 aa19.9■□□□□ 0.78
SNF8-205ENST00000507302 CYP2D6P10635 497 aa19.9■□□□□ 0.78
SNF8-205ENST00000507302 AKR1B1P15121 316 aa19.9■□□□□ 0.78
SNF8-205ENST00000507302 TAL1P17542 331 aaPredicted RBP19.9■□□□□ 0.78
SNF8-205ENST00000507302 ICA1Q05084 483 aa19.9■□□□□ 0.78
SNF8-205ENST00000507302 FPGSQ05932 587 aa19.9■□□□□ 0.78
SNF8-205ENST00000507302 PLS1Q14651 629 aa19.9■□□□□ 0.78
SNF8-205ENST00000507302 RASIP1Q5U651 963 aa19.9■□□□□ 0.78
SNF8-205ENST00000507302 AACSQ86V21 672 aa19.9■□□□□ 0.78
SNF8-205ENST00000507302 CLEC10AQ8IUN9 316 aa19.9■□□□□ 0.78
SNF8-205ENST00000507302 LCORLQ8N3X6 602 aa19.9■□□□□ 0.78
SNF8-205ENST00000507302 MSL3Q8N5Y2 521 aaKnown RBP19.9■□□□□ 0.78
SNF8-205ENST00000507302 USP38Q8NB14 1042 aa19.9■□□□□ 0.78
SNF8-205ENST00000507302 KLHDC9Q8NEP7 349 aa19.9■□□□□ 0.78
SNF8-205ENST00000507302 CCDC17Q96LX7 622 aa19.9■□□□□ 0.78
SNF8-205ENST00000507302 ZNF532Q9HCE3 1301 aa19.9■□□□□ 0.78
SNF8-205ENST00000507302 RLBP1P12271 317 aa19.89■□□□□ 0.77
SNF8-205ENST00000507302 AKR1A1P14550 325 aa19.89■□□□□ 0.77
SNF8-205ENST00000507302 RAG1P15918 1043 aa19.89■□□□□ 0.77
SNF8-205ENST00000507302 DNAJB2P25686 324 aa19.89■□□□□ 0.77
SNF8-205ENST00000507302 TJAP1Q5JTD0 557 aa19.89■□□□□ 0.77
SNF8-205ENST00000507302 SPICE1Q8N0Z3 855 aa19.89■□□□□ 0.77
SNF8-205ENST00000507302 DYNLL2Q96FJ2 89 aa19.89■□□□□ 0.77
SNF8-205ENST00000507302 MMP19Q99542 508 aa19.89■□□□□ 0.77
SNF8-205ENST00000507302 TBX21Q9UL17 535 aa19.89■□□□□ 0.77
SNF8-205ENST00000507302 CCER2I3L3R5 266 aa19.88■□□□□ 0.77
SNF8-205ENST00000507302 VWA5AO00534 786 aa19.88■□□□□ 0.77
SNF8-205ENST00000507302 MYCNP04198 464 aaPredicted RBP19.88■□□□□ 0.77
SNF8-205ENST00000507302 PGK2P07205 417 aa19.88■□□□□ 0.77
SNF8-205ENST00000507302 COPB2P35606 906 aa19.88■□□□□ 0.77
SNF8-205ENST00000507302 C12orf60Q5U649 245 aa19.88■□□□□ 0.77
SNF8-205ENST00000507302 ATP8A2Q9NTI2 1148 aa19.88■□□□□ 0.77
SNF8-205ENST00000507302 BDP1A6H8Y1 2624 aa19.87■□□□□ 0.77
SNF8-205ENST00000507302 MOXD2PA6NHM9 499 aa19.87■□□□□ 0.77
SNF8-205ENST00000507302 TIMP1P01033 207 aa19.87■□□□□ 0.77
SNF8-205ENST00000507302 CST5P28325 142 aaPredicted RBP19.87■□□□□ 0.77
SNF8-205ENST00000507302 CDK7P50613 346 aa19.87■□□□□ 0.77
SNF8-205ENST00000507302 ACLYP53396 1101 aa19.87■□□□□ 0.77
SNF8-205ENST00000507302 MAMDC4Q6UXC1 1216 aa19.87■□□□□ 0.77
SNF8-205ENST00000507302 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.87■□□□□ 0.77
SNF8-205ENST00000507302 TMEM39AQ9NV64 488 aa19.87■□□□□ 0.77
SNF8-205ENST00000507302 FBXO28Q9NVF7 368 aa19.87■□□□□ 0.77
SNF8-205ENST00000507302 PPP1R9AQ9ULJ8 1098 aa19.87■□□□□ 0.77
SNF8-205ENST00000507302 EXOC6BQ9Y2D4 811 aa19.87■□□□□ 0.77
SNF8-205ENST00000507302 NCOR1O75376 2440 aa19.87■□□□□ 0.77
SNF8-205ENST00000507302 MYH7P12883 1935 aa19.86■□□□□ 0.77
SNF8-205ENST00000507302 ZBED9Q6R2W3 1325 aa19.86■□□□□ 0.77
SNF8-205ENST00000507302 SYNGAP1Q96PV0 1343 aa19.86■□□□□ 0.77
SNF8-205ENST00000507302 SYNRGQ9UMZ2 1314 aa19.86■□□□□ 0.77
SNF8-205ENST00000507302 DNAJC25-GNG10A0A024R161 153 aa19.86■□□□□ 0.77
SNF8-205ENST00000507302 SMIM22K7EJ46 135 aa19.86■□□□□ 0.77
SNF8-205ENST00000507302 PQBP1O60828 265 aaKnown RBP19.86■□□□□ 0.77
SNF8-205ENST00000507302 STAT3P40763 770 aa19.86■□□□□ 0.77
SNF8-205ENST00000507302 CDK8P49336 464 aa19.86■□□□□ 0.77
SNF8-205ENST00000507302 KCTD2Q14681 263 aa19.86■□□□□ 0.77
SNF8-205ENST00000507302 C16orf86Q6ZW13 317 aa19.86■□□□□ 0.77
SNF8-205ENST00000507302 C16orf59Q7L2K0 433 aa19.86■□□□□ 0.77
SNF8-205ENST00000507302 RHPN1Q8TCX5 695 aa19.86■□□□□ 0.77
SNF8-205ENST00000507302 ZNF576Q9H609 170 aa19.86■□□□□ 0.77
SNF8-205ENST00000507302 ELP1O95163 1332 aa19.85■□□□□ 0.77
SNF8-205ENST00000507302 CHD7Q9P2D1 2997 aa19.85■□□□□ 0.77
SNF8-205ENST00000507302 DCDC2CA8MYV0 355 aa19.85■□□□□ 0.77
SNF8-205ENST00000507302 SNAI1O95863 264 aaPredicted RBP19.85■□□□□ 0.77
SNF8-205ENST00000507302 EEF2P13639 858 aaKnown RBP19.85■□□□□ 0.77
SNF8-205ENST00000507302 MFSD5Q6N075 450 aa19.85■□□□□ 0.77
SNF8-205ENST00000507302 NUP133Q8WUM0 1156 aa19.85■□□□□ 0.77
SNF8-205ENST00000507302 LENG1Q96BZ8 264 aaPredicted RBP19.85■□□□□ 0.77
SNF8-205ENST00000507302 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.85■□□□□ 0.77
SNF8-205ENST00000507302 KANSL2Q9H9L4 492 aa19.85■□□□□ 0.77
SNF8-205ENST00000507302 PRKAB2O43741 272 aa19.84■□□□□ 0.77
SNF8-205ENST00000507302 ADD2P35612 726 aa19.84■□□□□ 0.77
SNF8-205ENST00000507302 HSP90AB4PQ58FF6 505 aa19.84■□□□□ 0.77
SNF8-205ENST00000507302 ZNF467Q7Z7K2 595 aaPredicted RBP19.84■□□□□ 0.77
SNF8-205ENST00000507302 ITPRIPQ8IWB1 547 aa19.84■□□□□ 0.77
SNF8-205ENST00000507302 TIFAQ96CG3 184 aa19.84■□□□□ 0.77
SNF8-205ENST00000507302 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.84■□□□□ 0.77
SNF8-205ENST00000507302 ARMT1Q9H993 441 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms