RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 MSMPQ1L6U9 139 aa10.63□□□□□ -0.71
PFDN1-202ENST00000507185 CRIM1Q9NZV1 1036 aa10.63□□□□□ -0.71
PFDN1-202ENST00000507185 CRB1P82279 1406 aa10.63□□□□□ -0.71
PFDN1-202ENST00000507185 CPDO75976 1380 aa10.63□□□□□ -0.71
PFDN1-202ENST00000507185 COL5A2P05997 1499 aaPredicted RBP10.62□□□□□ -0.71
PFDN1-202ENST00000507185 NRKQ7Z2Y5 1582 aa10.62□□□□□ -0.71
PFDN1-202ENST00000507185 PLSCR1O15162 318 aa10.62□□□□□ -0.71
PFDN1-202ENST00000507185 ZNF862O60290 1169 aa10.62□□□□□ -0.71
PFDN1-202ENST00000507185 GPR162Q16538 588 aa10.62□□□□□ -0.71
PFDN1-202ENST00000507185 SULF2Q8IWU5 870 aa10.62□□□□□ -0.71
PFDN1-202ENST00000507185 SYT17Q9BSW7 474 aa10.62□□□□□ -0.71
PFDN1-202ENST00000507185 ATXN3LQ9H3M9 355 aa10.62□□□□□ -0.71
PFDN1-202ENST00000507185 POLR3AO14802 1390 aaPredicted RBP10.62□□□□□ -0.71
PFDN1-202ENST00000507185 NUP188Q5SRE5 1749 aa10.61□□□□□ -0.71
PFDN1-202ENST00000507185 USP19O94966 1318 aa10.61□□□□□ -0.71
PFDN1-202ENST00000507185 PPIP5K1Q6PFW1 1433 aa10.61□□□□□ -0.71
PFDN1-202ENST00000507185 DYNC1LI2O43237 492 aaPredicted RBP10.61□□□□□ -0.71
PFDN1-202ENST00000507185 C1QTNF8P60827 252 aa10.61□□□□□ -0.71
PFDN1-202ENST00000507185 TXNRD1Q16881 649 aa10.61□□□□□ -0.71
PFDN1-202ENST00000507185 KIF4BQ2VIQ3 1234 aa10.61□□□□□ -0.71
PFDN1-202ENST00000507185 SEZ6L2Q6UXD5 910 aa10.61□□□□□ -0.71
PFDN1-202ENST00000507185 ZNF765Q7L2R6 523 aa10.61□□□□□ -0.71
PFDN1-202ENST00000507185 MARCH10Q8NA82 808 aaPredicted RBP10.61□□□□□ -0.71
PFDN1-202ENST00000507185 FBF1Q8TES7 1133 aa10.61□□□□□ -0.71
PFDN1-202ENST00000507185 ACSBG1Q96GR2 724 aa10.61□□□□□ -0.71
PFDN1-202ENST00000507185 LRRC4CQ9HCJ2 640 aa10.61□□□□□ -0.71
PFDN1-202ENST00000507185 C1GALT1Q9NS00 363 aa10.61□□□□□ -0.71
PFDN1-202ENST00000507185 PHRF1Q9P1Y6 1649 aaKnown RBP10.6□□□□□ -0.71
PFDN1-202ENST00000507185 RBM47A0AV96 593 aaKnown RBP10.6□□□□□ -0.71
PFDN1-202ENST00000507185 ARNTP27540 789 aa10.6□□□□□ -0.71
PFDN1-202ENST00000507185 SLC15A2Q16348 729 aa10.6□□□□□ -0.71
PFDN1-202ENST00000507185 PDZD3Q86UT5 571 aa10.6□□□□□ -0.71
PFDN1-202ENST00000507185 ASB16Q96NS5 453 aa10.6□□□□□ -0.71
PFDN1-202ENST00000507185 FANCD2OSQ96PS1 177 aa10.6□□□□□ -0.71
PFDN1-202ENST00000507185 MTFR1LQ9H019 292 aa10.6□□□□□ -0.71
PFDN1-202ENST00000507185 RAB3GAP2Q9H2M9 1393 aa10.6□□□□□ -0.71
PFDN1-202ENST00000507185 RREB1Q92766 1687 aa10.6□□□□□ -0.71
PFDN1-202ENST00000507185 EXOC5O00471 708 aa10.59□□□□□ -0.71
PFDN1-202ENST00000507185 GSTT1P30711 240 aa10.59□□□□□ -0.71
PFDN1-202ENST00000507185 EMILIN2Q9BXX0 1053 aa10.59□□□□□ -0.71
PFDN1-202ENST00000507185 CCDC39Q9UFE4 941 aa10.59□□□□□ -0.71
PFDN1-202ENST00000507185 NME2P22392 152 aa10.58□□□□□ -0.72
PFDN1-202ENST00000507185 FMR1Q06787 632 aaKnown RBP eCLIP10.58□□□□□ -0.72
PFDN1-202ENST00000507185 ALG1LQ6GMV1 187 aa10.58□□□□□ -0.72
PFDN1-202ENST00000507185 OGFOD3Q6PK18 319 aa10.58□□□□□ -0.72
PFDN1-202ENST00000507185 STK35Q8TDR2 534 aa10.58□□□□□ -0.72
PFDN1-202ENST00000507185 SRCIN1Q9C0H9 1055 aa10.58□□□□□ -0.72
PFDN1-202ENST00000507185 DISC1Q9NRI5 854 aa10.58□□□□□ -0.72
PFDN1-202ENST00000507185 BSDC1Q9NW68 430 aaPredicted RBP10.58□□□□□ -0.72
PFDN1-202ENST00000507185 CRYBG1Q9Y4K1 1723 aa10.58□□□□□ -0.72
PFDN1-202ENST00000507185 WDR17Q8IZU2 1322 aa10.58□□□□□ -0.72
PFDN1-202ENST00000507185 AATKQ6ZMQ8 1374 aa10.57□□□□□ -0.72
PFDN1-202ENST00000507185 RNGTTO60942 597 aaKnown RBP10.57□□□□□ -0.72
PFDN1-202ENST00000507185 PRNPP04156 253 aa10.57□□□□□ -0.72
PFDN1-202ENST00000507185 TAL1P17542 331 aaPredicted RBP10.57□□□□□ -0.72
PFDN1-202ENST00000507185 ATP2B2Q01814 1243 aa10.57□□□□□ -0.72
PFDN1-202ENST00000507185 MAP1SQ66K74 1059 aaPredicted RBP10.57□□□□□ -0.72
PFDN1-202ENST00000507185 DNAJC14Q6Y2X3 702 aaPredicted RBP10.57□□□□□ -0.72
PFDN1-202ENST00000507185 VSIG10LQ86VR7 867 aa10.57□□□□□ -0.72
PFDN1-202ENST00000507185 SMYD4Q8IYR2 804 aaPredicted RBP10.57□□□□□ -0.72
PFDN1-202ENST00000507185 C3orf58Q8NDZ4 430 aa10.57□□□□□ -0.72
PFDN1-202ENST00000507185 CBX8Q9HC52 389 aa10.57□□□□□ -0.72
PFDN1-202ENST00000507185 PCDHGC5Q9Y5F6 944 aa10.57□□□□□ -0.72
PFDN1-202ENST00000507185 CENPJQ9HC77 1338 aaPredicted RBP10.57□□□□□ -0.72
PFDN1-202ENST00000507185 TTLL4Q14679 1199 aa10.56□□□□□ -0.72
PFDN1-202ENST00000507185 CYP27C1Q4G0S4 372 aa10.56□□□□□ -0.72
PFDN1-202ENST00000507185 SETDB2Q96T68 719 aa10.56□□□□□ -0.72
PFDN1-202ENST00000507185 CEP44Q9C0F1 390 aa10.56□□□□□ -0.72
PFDN1-202ENST00000507185 MYOM1P52179 1685 aa10.55□□□□□ -0.72
PFDN1-202ENST00000507185 GIPC1O14908 333 aa10.55□□□□□ -0.72
PFDN1-202ENST00000507185 PAX4O43316 350 aa10.55□□□□□ -0.72
PFDN1-202ENST00000507185 HCLS1P14317 486 aaPredicted RBP10.55□□□□□ -0.72
PFDN1-202ENST00000507185 POLD1P28340 1107 aa10.55□□□□□ -0.72
PFDN1-202ENST00000507185 TPTE2Q6XPS3 522 aa10.55□□□□□ -0.72
PFDN1-202ENST00000507185 FBXL18Q96ME1 805 aa10.55□□□□□ -0.72
PFDN1-202ENST00000507185 NECAB3Q96P71 396 aaPredicted RBP10.55□□□□□ -0.72
PFDN1-202ENST00000507185 ZC3H7BQ9UGR2 993 aaKnown RBP10.55□□□□□ -0.72
PFDN1-202ENST00000507185 WWC3Q9ULE0 1092 aa10.55□□□□□ -0.72
PFDN1-202ENST00000507185 SAMM50Q9Y512 469 aa10.55□□□□□ -0.72
PFDN1-202ENST00000507185 ITSN1Q15811 1721 aa10.55□□□□□ -0.72
PFDN1-202ENST00000507185 CDK5R2Q13319 367 aa10.54□□□□□ -0.72
PFDN1-202ENST00000507185 KRTAP9-2Q9BYQ4 174 aa10.54□□□□□ -0.72
PFDN1-202ENST00000507185 OSBPL7Q9BZF2 842 aa10.54□□□□□ -0.72
PFDN1-202ENST00000507185 PPM1HQ9ULR3 514 aa10.54□□□□□ -0.72
PFDN1-202ENST00000507185 LMO7Q8WWI1 1683 aa10.53□□□□□ -0.72
PFDN1-202ENST00000507185 USP6P35125 1406 aa10.53□□□□□ -0.72
PFDN1-202ENST00000507185 CPSF1Q10570 1443 aaKnown RBP10.53□□□□□ -0.72
PFDN1-202ENST00000507185 TP53INP2Q8IXH6 220 aa10.53□□□□□ -0.72
PFDN1-202ENST00000507185 ABI1Q8IZP0 508 aa10.53□□□□□ -0.72
PFDN1-202ENST00000507185 KCNH5Q8NCM2 988 aa10.53□□□□□ -0.72
PFDN1-202ENST00000507185 GPBAR1Q8TDU6 330 aa10.53□□□□□ -0.72
PFDN1-202ENST00000507185 SSU72Q9NP77 194 aaKnown RBP10.53□□□□□ -0.72
PFDN1-202ENST00000507185 IGSF5Q9NSI5 407 aa10.53□□□□□ -0.72
PFDN1-202ENST00000507185 PCOLCE2Q9UKZ9 415 aa10.53□□□□□ -0.72
PFDN1-202ENST00000507185 SPG7Q9UQ90 795 aa10.53□□□□□ -0.72
PFDN1-202ENST00000507185 LRRC37A3O60309 1634 aa10.53□□□□□ -0.72
PFDN1-202ENST00000507185 FAM87AP0C7U9 286 aa10.52□□□□□ -0.73
PFDN1-202ENST00000507185 ZNF252P-AS1Q0IIN9 211 aa10.52□□□□□ -0.73
PFDN1-202ENST00000507185 ZNF827Q17R98 1081 aa10.52□□□□□ -0.73
PFDN1-202ENST00000507185 ZC3H12AQ5D1E8 599 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms