RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 LHX8Q68G74 356 aa17.19■□□□□ 0.34
HMGCS1-203ENST00000507004 RIOX2Q8IUF8 465 aa17.19■□□□□ 0.34
HMGCS1-203ENST00000507004 DIS3LQ8TF46 1054 aaKnown RBP17.19■□□□□ 0.34
HMGCS1-203ENST00000507004 EVI5LQ96CN4 794 aa17.19■□□□□ 0.34
HMGCS1-203ENST00000507004 NAPBQ9H115 298 aa17.19■□□□□ 0.34
HMGCS1-203ENST00000507004 DIS3Q9Y2L1 958 aaKnown RBP17.19■□□□□ 0.34
HMGCS1-203ENST00000507004 RLFQ13129 1914 aa17.18■□□□□ 0.34
HMGCS1-203ENST00000507004 FDX1P10109 184 aa17.18■□□□□ 0.34
HMGCS1-203ENST00000507004 STAT3P40763 770 aa17.18■□□□□ 0.34
HMGCS1-203ENST00000507004 KCTD2Q14681 263 aa17.18■□□□□ 0.34
HMGCS1-203ENST00000507004 KIAA1755Q5JYT7 1200 aa17.18■□□□□ 0.34
HMGCS1-203ENST00000507004 CLEC10AQ8IUN9 316 aa17.18■□□□□ 0.34
HMGCS1-203ENST00000507004 NPLOC4Q8TAT6 608 aa17.18■□□□□ 0.34
HMGCS1-203ENST00000507004 MKL1Q969V6 931 aa17.18■□□□□ 0.34
HMGCS1-203ENST00000507004 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.18■□□□□ 0.34
HMGCS1-203ENST00000507004 STAP2Q9UGK3 403 aa17.18■□□□□ 0.34
HMGCS1-203ENST00000507004 F5H6K3 240 aa17.17■□□□□ 0.34
HMGCS1-203ENST00000507004 M0R2C6 588 aa17.17■□□□□ 0.34
HMGCS1-203ENST00000507004 VWA5AO00534 786 aa17.17■□□□□ 0.34
HMGCS1-203ENST00000507004 RAD21O60216 631 aa17.17■□□□□ 0.34
HMGCS1-203ENST00000507004 TTLL1O95922 423 aa17.17■□□□□ 0.34
HMGCS1-203ENST00000507004 IGHA2P01877 340 aa17.17■□□□□ 0.34
HMGCS1-203ENST00000507004 COL6A1P12109 1028 aa17.17■□□□□ 0.34
HMGCS1-203ENST00000507004 CNGA1P29973 690 aa17.17■□□□□ 0.34
HMGCS1-203ENST00000507004 MNX1P50219 401 aaPredicted RBP17.17■□□□□ 0.34
HMGCS1-203ENST00000507004 KLRC3Q07444 240 aa17.17■□□□□ 0.34
HMGCS1-203ENST00000507004 TMEM132BQ14DG7 1078 aa17.17■□□□□ 0.34
HMGCS1-203ENST00000507004 PRPF38AQ8NAV1 312 aaKnown RBP17.17■□□□□ 0.34
HMGCS1-203ENST00000507004 ARRDC4Q8NCT1 418 aa17.17■□□□□ 0.34
HMGCS1-203ENST00000507004 CRBNQ96SW2 442 aa17.17■□□□□ 0.34
HMGCS1-203ENST00000507004 SLF1Q9BQI6 1058 aa17.17■□□□□ 0.34
HMGCS1-203ENST00000507004 PRO3102Q9H379 93 aa17.17■□□□□ 0.34
HMGCS1-203ENST00000507004 EPB41L4AQ9HCS5 686 aaPredicted RBP17.17■□□□□ 0.34
HMGCS1-203ENST00000507004 FLRT1Q9NZU1 646 aa17.17■□□□□ 0.34
HMGCS1-203ENST00000507004 CTDP1Q9Y5B0 961 aaPredicted RBP17.17■□□□□ 0.34
HMGCS1-203ENST00000507004 GREB1LQ9C091 1923 aaPredicted RBP17.17■□□□□ 0.34
HMGCS1-203ENST00000507004 PLIN4Q96Q06 1357 aa17.16■□□□□ 0.34
HMGCS1-203ENST00000507004 IGKV6D-41A0A0C4DH26 115 aa17.16■□□□□ 0.34
HMGCS1-203ENST00000507004 SMIM22K7EJ46 135 aa17.16■□□□□ 0.34
HMGCS1-203ENST00000507004 DNM1LO00429 736 aa17.16■□□□□ 0.34
HMGCS1-203ENST00000507004 TSPY3P0CV98 308 aa17.16■□□□□ 0.34
HMGCS1-203ENST00000507004 TSPY8P0CW00 308 aa17.16■□□□□ 0.34
HMGCS1-203ENST00000507004 CYBAP13498 195 aa17.16■□□□□ 0.34
HMGCS1-203ENST00000507004 BMP8BP34820 402 aa17.16■□□□□ 0.34
HMGCS1-203ENST00000507004 FAM83BQ5T0W9 1011 aa17.16■□□□□ 0.34
HMGCS1-203ENST00000507004 NEDD1Q8NHV4 660 aa17.16■□□□□ 0.34
HMGCS1-203ENST00000507004 MMP19Q99542 508 aa17.16■□□□□ 0.34
HMGCS1-203ENST00000507004 TEX13BQ9BXU2 312 aa17.16■□□□□ 0.34
HMGCS1-203ENST00000507004 RBM27Q9P2N5 1060 aaKnown RBP17.16■□□□□ 0.34
HMGCS1-203ENST00000507004 TRIOBPQ9H2D6 2365 aa17.16■□□□□ 0.34
HMGCS1-203ENST00000507004 SALL3Q9BXA9 1300 aa17.16■□□□□ 0.34
HMGCS1-203ENST00000507004 ATP2A1O14983 1001 aa17.15■□□□□ 0.34
HMGCS1-203ENST00000507004 SEPT4O43236 478 aa17.15■□□□□ 0.34
HMGCS1-203ENST00000507004 ZBED4O75132 1171 aa17.15■□□□□ 0.34
HMGCS1-203ENST00000507004 NDUFB10O96000 172 aa17.15■□□□□ 0.34
HMGCS1-203ENST00000507004 CYP2C19P33261 490 aa17.15■□□□□ 0.34
HMGCS1-203ENST00000507004 PPARAQ07869 468 aa17.15■□□□□ 0.34
HMGCS1-203ENST00000507004 C7orf61Q8IZ16 206 aa17.15■□□□□ 0.34
HMGCS1-203ENST00000507004 MSL3Q8N5Y2 521 aaKnown RBP17.15■□□□□ 0.34
HMGCS1-203ENST00000507004 GMCL1P1Q8NEA9 526 aa17.15■□□□□ 0.34
HMGCS1-203ENST00000507004 RWDD1Q9H446 243 aaPredicted RBP17.15■□□□□ 0.34
HMGCS1-203ENST00000507004 HELLSQ9NRZ9 838 aa17.15■□□□□ 0.34
HMGCS1-203ENST00000507004 MTMR4Q9NYA4 1195 aa17.15■□□□□ 0.34
HMGCS1-203ENST00000507004 CLIP2Q9UDT6 1046 aa17.15■□□□□ 0.34
HMGCS1-203ENST00000507004 FEM1BQ9UK73 627 aa17.15■□□□□ 0.34
HMGCS1-203ENST00000507004 ZNF214Q9UL59 606 aaPredicted RBP17.15■□□□□ 0.34
HMGCS1-203ENST00000507004 COBLO75128 1261 aa17.14■□□□□ 0.33
HMGCS1-203ENST00000507004 OAZ1P54368 228 aa17.14■□□□□ 0.33
HMGCS1-203ENST00000507004 PDE1AP54750 535 aa17.14■□□□□ 0.33
HMGCS1-203ENST00000507004 SAMD1Q6SPF0 538 aaPredicted RBP17.14■□□□□ 0.33
HMGCS1-203ENST00000507004 OTUD7AQ8TE49 926 aaPredicted RBP17.14■□□□□ 0.33
HMGCS1-203ENST00000507004 MAML3Q96JK9 1138 aa17.14■□□□□ 0.33
HMGCS1-203ENST00000507004 FBXO28Q9NVF7 368 aa17.14■□□□□ 0.33
HMGCS1-203ENST00000507004 FBXO40Q9UH90 709 aa17.14■□□□□ 0.33
HMGCS1-203ENST00000507004 PFASO15067 1338 aa17.14■□□□□ 0.33
HMGCS1-203ENST00000507004 PARP14Q460N5 1801 aa17.13■□□□□ 0.33
HMGCS1-203ENST00000507004 REPS2Q8NFH8 660 aa17.13■□□□□ 0.33
HMGCS1-203ENST00000507004 CEP95Q96GE4 821 aa17.13■□□□□ 0.33
HMGCS1-203ENST00000507004 KBTBD13C9JR72 458 aa17.12■□□□□ 0.33
HMGCS1-203ENST00000507004 NT5C2P49902 561 aa17.12■□□□□ 0.33
HMGCS1-203ENST00000507004 TFAP4Q01664 338 aa17.12■□□□□ 0.33
HMGCS1-203ENST00000507004 ALX1Q15699 326 aa17.12■□□□□ 0.33
HMGCS1-203ENST00000507004 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.12■□□□□ 0.33
HMGCS1-203ENST00000507004 FAM160B2Q86V87 743 aa17.12■□□□□ 0.33
HMGCS1-203ENST00000507004 STK11IPQ8N1F8 1099 aa17.12■□□□□ 0.33
HMGCS1-203ENST00000507004 CHURC1Q8WUH1 139 aa17.12■□□□□ 0.33
HMGCS1-203ENST00000507004 SEC62Q99442 399 aaKnown RBP17.12■□□□□ 0.33
HMGCS1-203ENST00000507004 GDF15Q99988 308 aa17.12■□□□□ 0.33
HMGCS1-203ENST00000507004 ANAPC4Q9UJX5 808 aa17.12■□□□□ 0.33
HMGCS1-203ENST00000507004 PRDM1O75626 825 aa17.11■□□□□ 0.33
HMGCS1-203ENST00000507004 PCP11498 1178 aaKnown RBP17.11■□□□□ 0.33
HMGCS1-203ENST00000507004 BMP3P12645 472 aa17.11■□□□□ 0.33
HMGCS1-203ENST00000507004 MFAP1P55081 439 aaKnown RBP17.11■□□□□ 0.33
HMGCS1-203ENST00000507004 ZNF792Q3KQV3 632 aa17.11■□□□□ 0.33
HMGCS1-203ENST00000507004 SLFN13Q68D06 897 aa17.11■□□□□ 0.33
HMGCS1-203ENST00000507004 SNRNP48Q6IEG0 339 aaKnown RBP17.11■□□□□ 0.33
HMGCS1-203ENST00000507004 CHST13Q8NET6 341 aa17.11■□□□□ 0.33
HMGCS1-203ENST00000507004 DDX11Q96FC9 970 aa17.11■□□□□ 0.33
HMGCS1-203ENST00000507004 TINF2Q9BSI4 451 aa17.11■□□□□ 0.33
HMGCS1-203ENST00000507004 CNPY2Q9Y2B0 182 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms