RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 PAGR1Q9BTK6 254 aa21.4■■□□□ 1.02
NPHP4-210ENST00000506941 BTBD7Q9P203 1132 aa21.4■■□□□ 1.02
NPHP4-210ENST00000506941 TNKSO95271 1327 aa21.39■■□□□ 1.01
NPHP4-210ENST00000506941 DSG3P32926 999 aa21.39■■□□□ 1.01
NPHP4-210ENST00000506941 ANTXR2P58335 489 aa21.39■■□□□ 1.01
NPHP4-210ENST00000506941 ERVK-9P63128 1117 aa21.39■■□□□ 1.01
NPHP4-210ENST00000506941 ERVK-24P63145 666 aa21.39■■□□□ 1.01
NPHP4-210ENST00000506941 TRDNQ13061 729 aa21.39■■□□□ 1.01
NPHP4-210ENST00000506941 NCOA7Q8NI08 942 aa21.39■■□□□ 1.01
NPHP4-210ENST00000506941 GTF3C2Q8WUA4 911 aaPredicted RBP21.39■■□□□ 1.01
NPHP4-210ENST00000506941 ATG4CQ96DT6 458 aa21.39■■□□□ 1.01
NPHP4-210ENST00000506941 GMCL1Q96IK5 515 aa21.39■■□□□ 1.01
NPHP4-210ENST00000506941 TTC14Q96N46 770 aa21.39■■□□□ 1.01
NPHP4-210ENST00000506941 TRIM17Q9Y577 477 aa21.39■■□□□ 1.01
NPHP4-210ENST00000506941 MYPNQ86TC9 1320 aa21.38■■□□□ 1.01
NPHP4-210ENST00000506941 MCCP23508 829 aa21.38■■□□□ 1.01
NPHP4-210ENST00000506941 PSMC4P43686 418 aa21.38■■□□□ 1.01
NPHP4-210ENST00000506941 KIF22Q14807 665 aa21.38■■□□□ 1.01
NPHP4-210ENST00000506941 SEC23AQ15436 765 aa21.38■■□□□ 1.01
NPHP4-210ENST00000506941 Q3C1V9 767 aa21.38■■□□□ 1.01
NPHP4-210ENST00000506941 SAMD1Q6SPF0 538 aaPredicted RBP21.38■■□□□ 1.01
NPHP4-210ENST00000506941 RALYLQ86SE5 291 aaKnown RBP21.38■■□□□ 1.01
NPHP4-210ENST00000506941 DGKHQ86XP1 1220 aa21.38■■□□□ 1.01
NPHP4-210ENST00000506941 RASEFQ8IZ41 740 aa21.38■■□□□ 1.01
NPHP4-210ENST00000506941 ANKS1AQ92625 1134 aa21.38■■□□□ 1.01
NPHP4-210ENST00000506941 MCOLN1Q9GZU1 580 aa21.38■■□□□ 1.01
NPHP4-210ENST00000506941 EFCC1Q9HA90 598 aa21.38■■□□□ 1.01
NPHP4-210ENST00000506941 HOXC10Q9NYD6 342 aa21.38■■□□□ 1.01
NPHP4-210ENST00000506941 PPP1R9AQ9ULJ8 1098 aa21.38■■□□□ 1.01
NPHP4-210ENST00000506941 MTMR7Q9Y216 660 aa21.38■■□□□ 1.01
NPHP4-210ENST00000506941 RABGAP1Q9Y3P9 1069 aa21.38■■□□□ 1.01
NPHP4-210ENST00000506941 REC8O95072 547 aa21.37■■□□□ 1.01
NPHP4-210ENST00000506941 BMP3P12645 472 aa21.37■■□□□ 1.01
NPHP4-210ENST00000506941 CCDC178Q5BJE1 867 aa21.37■■□□□ 1.01
NPHP4-210ENST00000506941 CHST3Q7LGC8 479 aa21.37■■□□□ 1.01
NPHP4-210ENST00000506941 GPRC5AQ8NFJ5 357 aa21.37■■□□□ 1.01
NPHP4-210ENST00000506941 UBAC1Q9BSL1 405 aa21.37■■□□□ 1.01
NPHP4-210ENST00000506941 ADAMTS5Q9UNA0 930 aa21.37■■□□□ 1.01
NPHP4-210ENST00000506941 SLC1A4P43007 532 aa21.36■■□□□ 1.01
NPHP4-210ENST00000506941 RNF20Q5VTR2 975 aa21.36■■□□□ 1.01
NPHP4-210ENST00000506941 KCTD1Q719H9 257 aa21.36■■□□□ 1.01
NPHP4-210ENST00000506941 SLF1Q9BQI6 1058 aa21.36■■□□□ 1.01
NPHP4-210ENST00000506941 PORCNQ9H237 461 aa21.36■■□□□ 1.01
NPHP4-210ENST00000506941 GTF3C3Q9Y5Q9 886 aa21.36■■□□□ 1.01
NPHP4-210ENST00000506941 PLXNA1Q9UIW2 1896 aa21.36■■□□□ 1.01
NPHP4-210ENST00000506941 ZNF236Q9UL36 1845 aa21.35■■□□□ 1.01
NPHP4-210ENST00000506941 FMNL1O95466 1100 aaPredicted RBP21.35■■□□□ 1.01
NPHP4-210ENST00000506941 FCGRTP55899 365 aa21.35■■□□□ 1.01
NPHP4-210ENST00000506941 REPS2Q8NFH8 660 aa21.35■■□□□ 1.01
NPHP4-210ENST00000506941 DCAF4Q8WV16 495 aa21.35■■□□□ 1.01
NPHP4-210ENST00000506941 KCNB2Q92953 911 aa21.35■■□□□ 1.01
NPHP4-210ENST00000506941 SENP2Q9HC62 589 aa21.35■■□□□ 1.01
NPHP4-210ENST00000506941 TMEM232C9JQI7 657 aa21.34■■□□□ 1.01
NPHP4-210ENST00000506941 VWA5AO00534 786 aa21.34■■□□□ 1.01
NPHP4-210ENST00000506941 SNHG28P0DPA3 235 aa21.34■■□□□ 1.01
NPHP4-210ENST00000506941 PDHBP11177 359 aa21.34■■□□□ 1.01
NPHP4-210ENST00000506941 HSPA4P34932 840 aa21.34■■□□□ 1.01
NPHP4-210ENST00000506941 ADCK5Q3MIX3 580 aa21.34■■□□□ 1.01
NPHP4-210ENST00000506941 TSGA10IPQ3SY00 556 aa21.34■■□□□ 1.01
NPHP4-210ENST00000506941 TNS4Q8IZW8 715 aa21.34■■□□□ 1.01
NPHP4-210ENST00000506941 MB21D1Q8N884 522 aa21.34■■□□□ 1.01
NPHP4-210ENST00000506941 PNMA1Q8ND90 353 aa21.34■■□□□ 1.01
NPHP4-210ENST00000506941 FEM1BQ9UK73 627 aa21.34■■□□□ 1.01
NPHP4-210ENST00000506941 ISY1Q9ULR0 285 aaKnown RBP21.34■■□□□ 1.01
NPHP4-210ENST00000506941 IFIT3O14879 490 aaKnown RBP21.33■■□□□ 1.01
NPHP4-210ENST00000506941 TMEM132BQ14DG7 1078 aa21.33■■□□□ 1.01
NPHP4-210ENST00000506941 ARHGEF6Q15052 776 aa21.33■■□□□ 1.01
NPHP4-210ENST00000506941 CCDC96Q2M329 555 aa21.33■■□□□ 1.01
NPHP4-210ENST00000506941 IFIT1BQ5T764 474 aaKnown RBP21.33■■□□□ 1.01
NPHP4-210ENST00000506941 PRPF38AQ8NAV1 312 aaKnown RBP21.33■■□□□ 1.01
NPHP4-210ENST00000506941 IGDCC4Q8TDY8 1250 aa21.33■■□□□ 1.01
NPHP4-210ENST00000506941 USP26Q9BXU7 913 aa21.33■■□□□ 1.01
NPHP4-210ENST00000506941 KAT14Q9H8E8 782 aa21.33■■□□□ 1.01
NPHP4-210ENST00000506941 PTPN22Q9Y2R2 807 aa21.33■■□□□ 1.01
NPHP4-210ENST00000506941 BAZ2BQ9UIF8 2168 aaKnown RBP21.33■■□□□ 1
NPHP4-210ENST00000506941 FRMPD2Q68DX3 1309 aaPredicted RBP21.32■■□□□ 1
NPHP4-210ENST00000506941 TNPO2O14787 897 aaKnown RBP21.32■■□□□ 1
NPHP4-210ENST00000506941 PRC1O43663 620 aa21.32■■□□□ 1
NPHP4-210ENST00000506941 GNRH1P01148 92 aa21.32■■□□□ 1
NPHP4-210ENST00000506941 STAT2P52630 851 aa21.32■■□□□ 1
NPHP4-210ENST00000506941 PKN2Q16513 984 aaKnown RBP21.32■■□□□ 1
NPHP4-210ENST00000506941 TTBK2Q6IQ55 1244 aa21.32■■□□□ 1
NPHP4-210ENST00000506941 FBXO46Q6PJ61 603 aaPredicted RBP21.32■■□□□ 1
NPHP4-210ENST00000506941 KIFC2Q96AC6 838 aa21.32■■□□□ 1
NPHP4-210ENST00000506941 MOV10L1Q9BXT6 1211 aaKnown RBP21.32■■□□□ 1
NPHP4-210ENST00000506941 SPATC1LQ9H0A9 340 aa21.32■■□□□ 1
NPHP4-210ENST00000506941 GPHNQ9NQX3 736 aaPredicted RBP21.32■■□□□ 1
NPHP4-210ENST00000506941 SRRDQ9UH36 339 aa21.32■■□□□ 1
NPHP4-210ENST00000506941 GABRQQ9UN88 632 aa21.32■■□□□ 1
NPHP4-210ENST00000506941 SNX14Q9Y5W7 946 aa21.32■■□□□ 1
NPHP4-210ENST00000506941 EPB41L2O43491 1005 aaKnown RBP21.31■■□□□ 1
NPHP4-210ENST00000506941 PLA2G6O60733 806 aa21.31■■□□□ 1
NPHP4-210ENST00000506941 MCM5P33992 734 aa21.31■■□□□ 1
NPHP4-210ENST00000506941 PRKCZQ05513 592 aa21.31■■□□□ 1
NPHP4-210ENST00000506941 ZNF543Q08ER8 600 aa21.31■■□□□ 1
NPHP4-210ENST00000506941 TMEM67Q5HYA8 995 aa21.31■■□□□ 1
NPHP4-210ENST00000506941 GPCPD1Q9NPB8 672 aa21.31■■□□□ 1
NPHP4-210ENST00000506941 ZNF214Q9UL59 606 aaPredicted RBP21.31■■□□□ 1
NPHP4-210ENST00000506941 PTCH2Q9Y6C5 1203 aa21.31■■□□□ 1
NPHP4-210ENST00000506941 ZKSCAN1P17029 563 aaPredicted RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms