RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 USP17L17D6RBQ6 530 aa15.06■□□□□ 0
TCOF1-210ENST00000506767 USP17L19D6RCP7 530 aa15.06■□□□□ 0
TCOF1-210ENST00000506767 USP17L20D6RJB6 530 aa15.06■□□□□ 0
TCOF1-210ENST00000506767 USP17L24Q0WX57 530 aa15.06■□□□□ 0
TCOF1-210ENST00000506767 SGMS1Q86VZ5 419 aa15.06■□□□□ 0
TCOF1-210ENST00000506767 DCAF4Q8WV16 495 aa15.06■□□□□ 0
TCOF1-210ENST00000506767 UPF2Q9HAU5 1272 aaKnown RBP15.06■□□□□ 0
TCOF1-210ENST00000506767 CYP46A1Q9Y6A2 500 aa15.06■□□□□ 0
TCOF1-210ENST00000506767 CA12O43570 354 aa15.05■□□□□ -0
TCOF1-210ENST00000506767 PDHBP11177 359 aa15.05■□□□□ -0
TCOF1-210ENST00000506767 BMP3P12645 472 aa15.05■□□□□ -0
TCOF1-210ENST00000506767 FAM83BQ5T0W9 1011 aa15.05■□□□□ -0
TCOF1-210ENST00000506767 TBC1D32Q96NH3 1257 aa15.05■□□□□ -0
TCOF1-210ENST00000506767 NUP88Q99567 741 aaPredicted RBP15.05■□□□□ -0
TCOF1-210ENST00000506767 ASCC2Q9H1I8 757 aaPredicted RBP15.05■□□□□ -0
TCOF1-210ENST00000506767 ALDH8A1Q9H2A2 487 aaPredicted RBP15.05■□□□□ -0
TCOF1-210ENST00000506767 SAGE1Q9NXZ1 904 aa15.05■□□□□ -0
TCOF1-210ENST00000506767 ADGRA2Q96PE1 1338 aa15.04■□□□□ -0
TCOF1-210ENST00000506767 RAD21O60216 631 aa15.04■□□□□ -0
TCOF1-210ENST00000506767 CYP2C8P10632 490 aa15.04■□□□□ -0
TCOF1-210ENST00000506767 OSBPP22059 807 aa15.04■□□□□ -0
TCOF1-210ENST00000506767 SLC1A4P43007 532 aa15.04■□□□□ -0
TCOF1-210ENST00000506767 TROAPQ12815 778 aa15.04■□□□□ -0
TCOF1-210ENST00000506767 COG2Q14746 738 aa15.04■□□□□ -0
TCOF1-210ENST00000506767 TAF1CQ15572 869 aaPredicted RBP15.04■□□□□ -0
TCOF1-210ENST00000506767 Q6ZUG5 572 aa15.04■□□□□ -0
TCOF1-210ENST00000506767 RASGRP2Q7LDG7 609 aa15.04■□□□□ -0
TCOF1-210ENST00000506767 P2RX7Q99572 595 aaKnown RBP15.04■□□□□ -0
TCOF1-210ENST00000506767 BEGAINQ9BUH8 593 aa15.04■□□□□ -0
TCOF1-210ENST00000506767 UPF3BQ9BZI7 483 aaKnown RBP15.04■□□□□ -0
TCOF1-210ENST00000506767 PNMA3Q9UL41 463 aa15.04■□□□□ -0
TCOF1-210ENST00000506767 MYPNQ86TC9 1320 aa15.03■□□□□ -0
TCOF1-210ENST00000506767 PLA2G6O60733 806 aa15.03■□□□□ -0
TCOF1-210ENST00000506767 TRPA1O75762 1119 aa15.03■□□□□ -0
TCOF1-210ENST00000506767 DSG3P32926 999 aa15.03■□□□□ -0
TCOF1-210ENST00000506767 EVCP57679 992 aa15.03■□□□□ -0
TCOF1-210ENST00000506767 CRHR2Q13324 411 aa15.03■□□□□ -0
TCOF1-210ENST00000506767 TOB2Q14106 344 aaPredicted RBP15.03■□□□□ -0
TCOF1-210ENST00000506767 POTEEQ6S8J3 1075 aa15.03■□□□□ -0
TCOF1-210ENST00000506767 LBX2Q6XYB7 198 aa15.03■□□□□ -0
TCOF1-210ENST00000506767 PARK7Q99497 189 aaKnown RBP15.03■□□□□ -0
TCOF1-210ENST00000506767 MAP3K14Q99558 947 aa15.03■□□□□ -0
TCOF1-210ENST00000506767 TANGO6Q9C0B7 1094 aa15.03■□□□□ -0
TCOF1-210ENST00000506767 R3HDMLQ9H3Y0 253 aa15.03■□□□□ -0
TCOF1-210ENST00000506767 ZFYVE28Q9HCC9 887 aa15.03■□□□□ -0
TCOF1-210ENST00000506767 PRDM10Q9NQV6 1147 aa15.03■□□□□ -0
TCOF1-210ENST00000506767 TSKSQ9UJT2 592 aa15.03■□□□□ -0
TCOF1-210ENST00000506767 FEM1BQ9UK73 627 aa15.03■□□□□ -0
TCOF1-210ENST00000506767 ADAMTS5Q9UNA0 930 aa15.03■□□□□ -0
TCOF1-210ENST00000506767 CCDC69A6NI79 296 aa15.02■□□□□ -0
TCOF1-210ENST00000506767 TLR2O60603 784 aa15.02■□□□□ -0
TCOF1-210ENST00000506767 DDAH1O94760 285 aa15.02■□□□□ -0
TCOF1-210ENST00000506767 HSPA8P11142 646 aaKnown RBP15.02■□□□□ -0
TCOF1-210ENST00000506767 HERVK_113P62684 666 aa15.02■□□□□ -0
TCOF1-210ENST00000506767 IRX3P78415 501 aaPredicted RBP15.02■□□□□ -0
TCOF1-210ENST00000506767 ZNF543Q08ER8 600 aa15.02■□□□□ -0
TCOF1-210ENST00000506767 GPATCH4Q5T3I0 446 aaKnown RBP15.02■□□□□ -0
TCOF1-210ENST00000506767 BTNL9Q6UXG8 535 aa15.02■□□□□ -0
TCOF1-210ENST00000506767 KCTD1Q719H9 257 aa15.02■□□□□ -0
TCOF1-210ENST00000506767 CATIPQ7Z7H3 387 aa15.02■□□□□ -0
TCOF1-210ENST00000506767 ZNF654Q8IZM8 581 aa15.02■□□□□ -0
TCOF1-210ENST00000506767 PDRG1Q9NUG6 133 aa15.02■□□□□ -0
TCOF1-210ENST00000506767 FBXO28Q9NVF7 368 aa15.02■□□□□ -0
TCOF1-210ENST00000506767 HOXC10Q9NYD6 342 aa15.02■□□□□ -0
TCOF1-210ENST00000506767 BRPF3Q9ULD4 1205 aa15.02■□□□□ -0
TCOF1-210ENST00000506767 MTMR7Q9Y216 660 aa15.02■□□□□ -0
TCOF1-210ENST00000506767 A0A0G2JMZ2 1700 aa15.01□□□□□ -0.01
TCOF1-210ENST00000506767 PALM3A6NDB9 673 aaPredicted RBP15.01□□□□□ -0.01
TCOF1-210ENST00000506767 SPDYE16A6NNV3 312 aaPredicted RBP15.01□□□□□ -0.01
TCOF1-210ENST00000506767 TMEM232C9JQI7 657 aa15.01□□□□□ -0.01
TCOF1-210ENST00000506767 FLOT1O75955 427 aa15.01□□□□□ -0.01
TCOF1-210ENST00000506767 TBC1D8O95759 1140 aa15.01□□□□□ -0.01
TCOF1-210ENST00000506767 GRM4Q14833 912 aa15.01□□□□□ -0.01
TCOF1-210ENST00000506767 ASPRV1Q53RT3 343 aa15.01□□□□□ -0.01
TCOF1-210ENST00000506767 TTBK2Q6IQ55 1244 aa15.01□□□□□ -0.01
TCOF1-210ENST00000506767 APOA5Q6Q788 366 aa15.01□□□□□ -0.01
TCOF1-210ENST00000506767 C17orf99Q6UX52 265 aa15.01□□□□□ -0.01
TCOF1-210ENST00000506767 NFXL1Q6ZNB6 911 aa15.01□□□□□ -0.01
TCOF1-210ENST00000506767 FAM160B2Q86V87 743 aa15.01□□□□□ -0.01
TCOF1-210ENST00000506767 PRPF38AQ8NAV1 312 aaKnown RBP15.01□□□□□ -0.01
TCOF1-210ENST00000506767 GTF3C2Q8WUA4 911 aaPredicted RBP15.01□□□□□ -0.01
TCOF1-210ENST00000506767 BRF1Q92994 677 aa15.01□□□□□ -0.01
TCOF1-210ENST00000506767 CHMP4CQ96CF2 233 aa15.01□□□□□ -0.01
TCOF1-210ENST00000506767 MAD2L2Q9UI95 211 aa15.01□□□□□ -0.01
TCOF1-210ENST00000506767 PPP1R9AQ9ULJ8 1098 aa15.01□□□□□ -0.01
TCOF1-210ENST00000506767 SLC12A7Q9Y666 1083 aa15.01□□□□□ -0.01
TCOF1-210ENST00000506767 FRMPD2Q68DX3 1309 aaPredicted RBP15□□□□□ -0.01
TCOF1-210ENST00000506767 PARP1P09874 1014 aaKnown RBP15□□□□□ -0.01
TCOF1-210ENST00000506767 CALM1P0DP23 149 aa15□□□□□ -0.01
TCOF1-210ENST00000506767 CALM2P0DP24 149 aa15□□□□□ -0.01
TCOF1-210ENST00000506767 CALM3P0DP25 149 aa15□□□□□ -0.01
TCOF1-210ENST00000506767 BCRP11274 1271 aa15□□□□□ -0.01
TCOF1-210ENST00000506767 GCLCP48506 637 aaPredicted RBP15□□□□□ -0.01
TCOF1-210ENST00000506767 NEK4P51957 841 aa15□□□□□ -0.01
TCOF1-210ENST00000506767 STAT2P52630 851 aa15□□□□□ -0.01
TCOF1-210ENST00000506767 RCAN1P53805 252 aa15□□□□□ -0.01
TCOF1-210ENST00000506767 FGD1P98174 961 aa15□□□□□ -0.01
TCOF1-210ENST00000506767 APOBRQ0VD83 1088 aa15□□□□□ -0.01
TCOF1-210ENST00000506767 CCDC96Q2M329 555 aa15□□□□□ -0.01
TCOF1-210ENST00000506767 NOM1Q5C9Z4 860 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms