RNA–Protein interactions for RNA: ENST00000506401.6

ITGA3-207, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-207ENST00000506401 KRT85P78386 507 aa20.62■□□□□ 0.89
ITGA3-207ENST00000506401 KLRC3Q07444 240 aa20.62■□□□□ 0.89
ITGA3-207ENST00000506401 PRAMEF18Q5VWM3 479 aa20.62■□□□□ 0.89
ITGA3-207ENST00000506401 BRAPQ7Z569 592 aa20.62■□□□□ 0.89
ITGA3-207ENST00000506401 ZC3H15Q8WU90 426 aaKnown RBP20.62■□□□□ 0.89
ITGA3-207ENST00000506401 SH2D4AQ9H788 454 aa20.62■□□□□ 0.89
ITGA3-207ENST00000506401 CYTH3O43739 400 aa20.62■□□□□ 0.89
ITGA3-207ENST00000506401 MMP1P03956 469 aa20.62■□□□□ 0.89
ITGA3-207ENST00000506401 SLC1A4P43007 532 aa20.62■□□□□ 0.89
ITGA3-207ENST00000506401 CSPP1Q1MSJ5 1256 aa20.62■□□□□ 0.89
ITGA3-207ENST00000506401 RRP36Q96EU6 259 aaKnown RBP20.62■□□□□ 0.89
ITGA3-207ENST00000506401 RIOX1Q9H6W3 641 aa20.62■□□□□ 0.89
ITGA3-207ENST00000506401 ISY1Q9ULR0 285 aaKnown RBP20.62■□□□□ 0.89
ITGA3-207ENST00000506401 TMX2Q9Y320 296 aa20.62■□□□□ 0.89
ITGA3-207ENST00000506401 KIF23Q02241 960 aaPredicted RBP20.61■□□□□ 0.89
ITGA3-207ENST00000506401 FAM173BQ6P4H8 233 aa20.61■□□□□ 0.89
ITGA3-207ENST00000506401 USP48Q86UV5 1035 aa20.61■□□□□ 0.89
ITGA3-207ENST00000506401 GMCL1Q96IK5 515 aa20.61■□□□□ 0.89
ITGA3-207ENST00000506401 UBA5Q9GZZ9 404 aa20.61■□□□□ 0.89
ITGA3-207ENST00000506401 GOPCQ9HD26 462 aa20.61■□□□□ 0.89
ITGA3-207ENST00000506401 VPS54Q9P1Q0 977 aa20.61■□□□□ 0.89
ITGA3-207ENST00000506401 SEC63Q9UGP8 760 aaKnown RBP20.61■□□□□ 0.89
ITGA3-207ENST00000506401 ZNF112Q9UJU3 913 aa20.61■□□□□ 0.89
ITGA3-207ENST00000506401 KCNJ14Q9UNX9 436 aa20.61■□□□□ 0.89
ITGA3-207ENST00000506401 CNPY2Q9Y2B0 182 aa20.61■□□□□ 0.89
ITGA3-207ENST00000506401 MYH15Q9Y2K3 1946 aa20.61■□□□□ 0.89
ITGA3-207ENST00000506401 A0A1W2PRG0 241 aa20.6■□□□□ 0.89
ITGA3-207ENST00000506401 SLC35G1Q2M3R5 365 aa20.6■□□□□ 0.89
ITGA3-207ENST00000506401 ATL3Q6DD88 541 aa20.6■□□□□ 0.89
ITGA3-207ENST00000506401 ZNF396Q96N95 335 aaPredicted RBP20.6■□□□□ 0.89
ITGA3-207ENST00000506401 VAT1LQ9HCJ6 419 aa20.6■□□□□ 0.89
ITGA3-207ENST00000506401 SH3GLB2Q9NR46 395 aa20.6■□□□□ 0.89
ITGA3-207ENST00000506401 PRPF40AO75400 957 aaKnown RBP20.6■□□□□ 0.89
ITGA3-207ENST00000506401 KCTD1Q719H9 257 aa20.6■□□□□ 0.89
ITGA3-207ENST00000506401 ACER1Q8TDN7 264 aa20.6■□□□□ 0.89
ITGA3-207ENST00000506401 CPVLQ9H3G5 476 aa20.6■□□□□ 0.89
ITGA3-207ENST00000506401 TAF1DQ9H5J8 278 aaPredicted RBP20.6■□□□□ 0.89
ITGA3-207ENST00000506401 CFAP45Q9UL16 551 aa20.6■□□□□ 0.89
ITGA3-207ENST00000506401 DCAF8L1A6NGE4 600 aa20.59■□□□□ 0.89
ITGA3-207ENST00000506401 NDUFB10O96000 172 aa20.59■□□□□ 0.89
ITGA3-207ENST00000506401 U2AF2P26368 475 aaKnown RBP eCLIP20.59■□□□□ 0.89
ITGA3-207ENST00000506401 ECE1P42892 770 aa20.59■□□□□ 0.89
ITGA3-207ENST00000506401 KRT26Q7Z3Y9 468 aa20.59■□□□□ 0.89
ITGA3-207ENST00000506401 PHF20Q9BVI0 1012 aa20.59■□□□□ 0.89
ITGA3-207ENST00000506401 BRMS1Q9HCU9 246 aa20.59■□□□□ 0.89
ITGA3-207ENST00000506401 LMBRD1Q9NUN5 540 aa20.59■□□□□ 0.89
ITGA3-207ENST00000506401 PNMA8AQ86V59 439 aaPredicted RBP20.58■□□□□ 0.89
ITGA3-207ENST00000506401 DIS3L2Q8IYB7 885 aaKnown RBP20.58■□□□□ 0.89
ITGA3-207ENST00000506401 FAM177A1Q8N128 213 aaPredicted RBP20.58■□□□□ 0.89
ITGA3-207ENST00000506401 WRNIP1Q96S55 665 aa20.58■□□□□ 0.89
ITGA3-207ENST00000506401 SCAND2PQ9GZW5 306 aaPredicted RBP20.58■□□□□ 0.89
ITGA3-207ENST00000506401 FOXP1Q9H334 677 aaPredicted RBP20.58■□□□□ 0.89
ITGA3-207ENST00000506401 WDR90Q96KV7 1748 aa20.58■□□□□ 0.88
ITGA3-207ENST00000506401 KIF28PB7ZC32 967 aa20.57■□□□□ 0.88
ITGA3-207ENST00000506401 BMP3P12645 472 aa20.57■□□□□ 0.88
ITGA3-207ENST00000506401 INPP5BP32019 993 aa20.57■□□□□ 0.88
ITGA3-207ENST00000506401 SKOR2Q2VWA4 1001 aaPredicted RBP20.57■□□□□ 0.88
ITGA3-207ENST00000506401 EAPPQ56P03 285 aaPredicted RBP20.57■□□□□ 0.88
ITGA3-207ENST00000506401 TTBK2Q6IQ55 1244 aa20.57■□□□□ 0.88
ITGA3-207ENST00000506401 ADGRF4Q8IZF3 695 aa20.57■□□□□ 0.88
ITGA3-207ENST00000506401 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.57■□□□□ 0.88
ITGA3-207ENST00000506401 TFIP11Q9UBB9 837 aaKnown RBP20.57■□□□□ 0.88
ITGA3-207ENST00000506401 DOCK1Q14185 1865 aa20.57■□□□□ 0.88
ITGA3-207ENST00000506401 FIBPO43427 364 aa20.57■□□□□ 0.88
ITGA3-207ENST00000506401 CALML3P27482 149 aa20.57■□□□□ 0.88
ITGA3-207ENST00000506401 NLRP5P59047 1200 aa20.57■□□□□ 0.88
ITGA3-207ENST00000506401 HEATR3Q7Z4Q2 680 aa20.57■□□□□ 0.88
ITGA3-207ENST00000506401 HOMER1Q86YM7 354 aa20.57■□□□□ 0.88
ITGA3-207ENST00000506401 SCYL3Q8IZE3 742 aa20.57■□□□□ 0.88
ITGA3-207ENST00000506401 TMEM87AQ8NBN3 555 aa20.57■□□□□ 0.88
ITGA3-207ENST00000506401 PIGSQ96S52 555 aa20.57■□□□□ 0.88
ITGA3-207ENST00000506401 GDPD2Q9HCC8 539 aa20.57■□□□□ 0.88
ITGA3-207ENST00000506401 PICK1Q9NRD5 415 aa20.57■□□□□ 0.88
ITGA3-207ENST00000506401 BTBD18B2RXH4 712 aa20.56■□□□□ 0.88
ITGA3-207ENST00000506401 ADM5C9JUS6 153 aa20.56■□□□□ 0.88
ITGA3-207ENST00000506401 VEGFAP15692 232 aaPredicted RBP20.56■□□□□ 0.88
ITGA3-207ENST00000506401 KRT2P35908 639 aa20.56■□□□□ 0.88
ITGA3-207ENST00000506401 SLC16A2P36021 539 aa20.56■□□□□ 0.88
ITGA3-207ENST00000506401 CCDC148Q8NFR7 591 aa20.56■□□□□ 0.88
ITGA3-207ENST00000506401 CCDC12Q8WUD4 166 aaPredicted RBP20.56■□□□□ 0.88
ITGA3-207ENST00000506401 KLRG1Q96E93 195 aa20.56■□□□□ 0.88
ITGA3-207ENST00000506401 FEZ1Q99689 392 aa20.56■□□□□ 0.88
ITGA3-207ENST00000506401 VCPKMTQ9H867 229 aa20.56■□□□□ 0.88
ITGA3-207ENST00000506401 BARHL2Q9NY43 387 aa20.56■□□□□ 0.88
ITGA3-207ENST00000506401 POTECB2RU33 542 aa20.55■□□□□ 0.88
ITGA3-207ENST00000506401 TRAK2O60296 914 aa20.55■□□□□ 0.88
ITGA3-207ENST00000506401 MYSM1Q5VVJ2 828 aa20.55■□□□□ 0.88
ITGA3-207ENST00000506401 WWC2Q6AWC2 1192 aa20.55■□□□□ 0.88
ITGA3-207ENST00000506401 NOSTRINQ8IVI9 506 aa20.55■□□□□ 0.88
ITGA3-207ENST00000506401 GPKOWQ92917 476 aaPredicted RBP eCLIP20.55■□□□□ 0.88
ITGA3-207ENST00000506401 JMJD4Q9H9V9 463 aa20.55■□□□□ 0.88
ITGA3-207ENST00000506401 PNMA6FA0A0J9YX94 578 aa20.55■□□□□ 0.88
ITGA3-207ENST00000506401 hCG_1984214I3L0E3 225 aa20.55■□□□□ 0.88
ITGA3-207ENST00000506401 PPP1R12BO60237 982 aaPredicted RBP20.55■□□□□ 0.88
ITGA3-207ENST00000506401 NF2P35240 595 aa20.55■□□□□ 0.88
ITGA3-207ENST00000506401 IKQ13123 557 aaPredicted RBP20.55■□□□□ 0.88
ITGA3-207ENST00000506401 SPICE1Q8N0Z3 855 aa20.55■□□□□ 0.88
ITGA3-207ENST00000506401 ZNF713Q8N859 430 aaPredicted RBP20.55■□□□□ 0.88
ITGA3-207ENST00000506401 SHISA4Q96DD7 197 aa20.55■□□□□ 0.88
ITGA3-207ENST00000506401 SPATA32Q96LK8 384 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms