RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 OR8K1Q8NGG5 319 aa17.84■□□□□ 0.45
SCLT1-208ENST00000506368 AIFM3Q96NN9 605 aa17.84■□□□□ 0.45
SCLT1-208ENST00000506368 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.84■□□□□ 0.45
SCLT1-208ENST00000506368 PLEKHA4Q9H4M7 779 aa17.84■□□□□ 0.45
SCLT1-208ENST00000506368 RWDD2AQ9UIY3 292 aa17.84■□□□□ 0.45
SCLT1-208ENST00000506368 DOT1LQ8TEK3 1739 aa17.84■□□□□ 0.45
SCLT1-208ENST00000506368 MYH8P13535 1937 aa17.84■□□□□ 0.45
SCLT1-208ENST00000506368 A0A1W2PQC6 194 aa17.84■□□□□ 0.45
SCLT1-208ENST00000506368 H7C1W4 665 aa17.84■□□□□ 0.45
SCLT1-208ENST00000506368 MEFVO15553 781 aaPredicted RBP17.84■□□□□ 0.45
SCLT1-208ENST00000506368 TNFRSF8P28908 595 aa17.84■□□□□ 0.45
SCLT1-208ENST00000506368 KRT9P35527 623 aa17.84■□□□□ 0.45
SCLT1-208ENST00000506368 FOXO4P98177 505 aa17.84■□□□□ 0.45
SCLT1-208ENST00000506368 PLBD2Q8NHP8 589 aa17.84■□□□□ 0.45
SCLT1-208ENST00000506368 MMS19Q96T76 1030 aa17.84■□□□□ 0.45
SCLT1-208ENST00000506368 SLF1Q9BQI6 1058 aa17.84■□□□□ 0.45
SCLT1-208ENST00000506368 MTA3Q9BTC8 594 aa17.84■□□□□ 0.45
SCLT1-208ENST00000506368 SCN11AQ9UI33 1791 aa17.84■□□□□ 0.45
SCLT1-208ENST00000506368 PPP1R3GB7ZBB8 358 aa17.83■□□□□ 0.45
SCLT1-208ENST00000506368 KCNQ2O43526 872 aa17.83■□□□□ 0.45
SCLT1-208ENST00000506368 PRLRP16471 622 aa17.83■□□□□ 0.45
SCLT1-208ENST00000506368 RDXP35241 583 aaKnown RBP17.83■□□□□ 0.45
SCLT1-208ENST00000506368 TOB1P50616 345 aaPredicted RBP17.83■□□□□ 0.45
SCLT1-208ENST00000506368 COPB1P53618 953 aaKnown RBP17.83■□□□□ 0.45
SCLT1-208ENST00000506368 NEDD9Q14511 834 aa17.83■□□□□ 0.45
SCLT1-208ENST00000506368 DIS3L2Q8IYB7 885 aaKnown RBP17.83■□□□□ 0.45
SCLT1-208ENST00000506368 OTUD6BQ8N6M0 293 aa17.83■□□□□ 0.45
SCLT1-208ENST00000506368 C1orf131Q8NDD1 294 aaKnown RBP17.83■□□□□ 0.45
SCLT1-208ENST00000506368 FERMT2Q96AC1 680 aa17.83■□□□□ 0.45
SCLT1-208ENST00000506368 TSGA10Q9BZW7 698 aa17.83■□□□□ 0.45
SCLT1-208ENST00000506368 GNL3LQ9NVN8 582 aaKnown RBP17.83■□□□□ 0.45
SCLT1-208ENST00000506368 SBF2Q86WG5 1849 aa17.83■□□□□ 0.44
SCLT1-208ENST00000506368 MYL6BP14649 208 aa17.83■□□□□ 0.44
SCLT1-208ENST00000506368 CYLC1P35663 651 aaPredicted RBP17.83■□□□□ 0.44
SCLT1-208ENST00000506368 EPHB4P54760 987 aa17.83■□□□□ 0.44
SCLT1-208ENST00000506368 TIMM10P62072 90 aa17.83■□□□□ 0.44
SCLT1-208ENST00000506368 DPYDQ12882 1025 aa17.83■□□□□ 0.44
SCLT1-208ENST00000506368 SEMA3FQ13275 785 aa17.83■□□□□ 0.44
SCLT1-208ENST00000506368 JAKMIP2Q96AA8 810 aa17.83■□□□□ 0.44
SCLT1-208ENST00000506368 RUFY1Q96T51 708 aa17.83■□□□□ 0.44
SCLT1-208ENST00000506368 DNAJC7Q99615 494 aa17.83■□□□□ 0.44
SCLT1-208ENST00000506368 NBPF3Q9H094 633 aa17.83■□□□□ 0.44
SCLT1-208ENST00000506368 GUCA1BQ9UMX6 200 aa17.83■□□□□ 0.44
SCLT1-208ENST00000506368 LAMB4A4D0S4 1761 aa17.82■□□□□ 0.44
SCLT1-208ENST00000506368 H0YHG0 523 aa17.82■□□□□ 0.44
SCLT1-208ENST00000506368 GPAA1O43292 621 aa17.82■□□□□ 0.44
SCLT1-208ENST00000506368 IPO7O95373 1038 aaKnown RBP17.82■□□□□ 0.44
SCLT1-208ENST00000506368 SNRPA1P09661 255 aaKnown RBP17.82■□□□□ 0.44
SCLT1-208ENST00000506368 GPTP24298 496 aa17.82■□□□□ 0.44
SCLT1-208ENST00000506368 FNTAP49354 379 aa17.82■□□□□ 0.44
SCLT1-208ENST00000506368 KRT31Q15323 416 aa17.82■□□□□ 0.44
SCLT1-208ENST00000506368 ANKRD18AQ8IVF6 992 aa17.82■□□□□ 0.44
SCLT1-208ENST00000506368 CCDC170Q8IYT3 715 aa17.82■□□□□ 0.44
SCLT1-208ENST00000506368 GIMAP7Q8NHV1 300 aa17.82■□□□□ 0.44
SCLT1-208ENST00000506368 CAGE1Q8TC20 777 aa17.82■□□□□ 0.44
SCLT1-208ENST00000506368 DEXIO95424 95 aa17.81■□□□□ 0.44
SCLT1-208ENST00000506368 CCDC122Q5T0U0 273 aa17.81■□□□□ 0.44
SCLT1-208ENST00000506368 CCDC50Q8IVM0 306 aa17.81■□□□□ 0.44
SCLT1-208ENST00000506368 BANK1Q8NDB2 785 aa17.81■□□□□ 0.44
SCLT1-208ENST00000506368 PHKBQ93100 1093 aa17.81■□□□□ 0.44
SCLT1-208ENST00000506368 CAVIN3Q969G5 261 aa17.81■□□□□ 0.44
SCLT1-208ENST00000506368 PAGE5Q96GU1 130 aa17.81■□□□□ 0.44
SCLT1-208ENST00000506368 RMND1Q9NWS8 449 aa17.81■□□□□ 0.44
SCLT1-208ENST00000506368 ITGB4P16144 1822 aa17.81■□□□□ 0.44
SCLT1-208ENST00000506368 NDUFAB1O14561 156 aa17.81■□□□□ 0.44
SCLT1-208ENST00000506368 RANBP6O60518 1105 aaKnown RBP17.81■□□□□ 0.44
SCLT1-208ENST00000506368 ATP1A1P05023 1023 aaKnown RBP17.81■□□□□ 0.44
SCLT1-208ENST00000506368 TTF1Q15361 905 aaPredicted RBP17.81■□□□□ 0.44
SCLT1-208ENST00000506368 SLC52A2Q9HAB3 445 aa17.81■□□□□ 0.44
SCLT1-208ENST00000506368 RNF216Q9NWF9 866 aaPredicted RBP17.81■□□□□ 0.44
SCLT1-208ENST00000506368 SUFUQ9UMX1 484 aa17.81■□□□□ 0.44
SCLT1-208ENST00000506368 CAPN7Q9Y6W3 813 aa17.81■□□□□ 0.44
SCLT1-208ENST00000506368 HSF2BPO75031 334 aa17.8■□□□□ 0.44
SCLT1-208ENST00000506368 CD44P16070 742 aaKnown RBP17.8■□□□□ 0.44
SCLT1-208ENST00000506368 NKX1-1Q15270 411 aaPredicted RBP17.8■□□□□ 0.44
SCLT1-208ENST00000506368 TCP11X2Q5H9J9 407 aa17.8■□□□□ 0.44
SCLT1-208ENST00000506368 SPECC1Q5M775 1068 aa17.8■□□□□ 0.44
SCLT1-208ENST00000506368 FBXW10Q5XX13 1052 aa17.8■□□□□ 0.44
SCLT1-208ENST00000506368 NFXL1Q6ZNB6 911 aa17.8■□□□□ 0.44
SCLT1-208ENST00000506368 MICU3Q86XE3 530 aa17.8■□□□□ 0.44
SCLT1-208ENST00000506368 RETREG2Q8NC44 543 aa17.8■□□□□ 0.44
SCLT1-208ENST00000506368 C3orf20Q8ND61 904 aa17.8■□□□□ 0.44
SCLT1-208ENST00000506368 IGDCC4Q8TDY8 1250 aa17.8■□□□□ 0.44
SCLT1-208ENST00000506368 RIN2Q8WYP3 895 aaPredicted RBP17.8■□□□□ 0.44
SCLT1-208ENST00000506368 IQCDQ96DY2 449 aa17.8■□□□□ 0.44
SCLT1-208ENST00000506368 NUP58Q9BVL2 599 aa17.8■□□□□ 0.44
SCLT1-208ENST00000506368 SLC26A6Q9BXS9 759 aa17.8■□□□□ 0.44
SCLT1-208ENST00000506368 ZNHIT6Q9NWK9 470 aaKnown RBP17.8■□□□□ 0.44
SCLT1-208ENST00000506368 CEP126Q9P2H0 1117 aa17.8■□□□□ 0.44
SCLT1-208ENST00000506368 LUC7L2Q9Y383 392 aaKnown RBP17.8■□□□□ 0.44
SCLT1-208ENST00000506368 REXO2Q9Y3B8 237 aaKnown RBP17.8■□□□□ 0.44
SCLT1-208ENST00000506368 SLC12A7Q9Y666 1083 aa17.8■□□□□ 0.44
SCLT1-208ENST00000506368 BTBD18B2RXH4 712 aa17.79■□□□□ 0.44
SCLT1-208ENST00000506368 SMTNP53814 917 aa17.79■□□□□ 0.44
SCLT1-208ENST00000506368 GLE1Q53GS7 698 aaKnown RBP17.79■□□□□ 0.44
SCLT1-208ENST00000506368 KLHL10Q6JEL2 608 aa17.79■□□□□ 0.44
SCLT1-208ENST00000506368 RAB11FIP4Q86YS3 637 aa17.79■□□□□ 0.44
SCLT1-208ENST00000506368 CSRNP2Q9H175 543 aa17.79■□□□□ 0.44
SCLT1-208ENST00000506368 H7C1D1 291 aa17.79■□□□□ 0.44
SCLT1-208ENST00000506368 TFRCP02786 760 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms