RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 FARP2O94887 1054 aaPredicted RBP19.98■□□□□ 0.79
PDLIM7-215ENST00000506161 PRKAR2AP13861 404 aaKnown RBP19.98■□□□□ 0.79
PDLIM7-215ENST00000506161 PPARAQ07869 468 aa19.98■□□□□ 0.79
PDLIM7-215ENST00000506161 GRB14Q14449 540 aa19.98■□□□□ 0.79
PDLIM7-215ENST00000506161 TMEM132BQ14DG7 1078 aa19.98■□□□□ 0.79
PDLIM7-215ENST00000506161 FAM47AQ5JRC9 791 aa19.98■□□□□ 0.79
PDLIM7-215ENST00000506161 REPS2Q8NFH8 660 aa19.98■□□□□ 0.79
PDLIM7-215ENST00000506161 EVI5LQ96CN4 794 aa19.98■□□□□ 0.79
PDLIM7-215ENST00000506161 CEP95Q96GE4 821 aa19.98■□□□□ 0.79
PDLIM7-215ENST00000506161 APBA2Q99767 749 aa19.98■□□□□ 0.79
PDLIM7-215ENST00000506161 SPATC1LQ9H0A9 340 aa19.98■□□□□ 0.79
PDLIM7-215ENST00000506161 MKNK2Q9HBH9 465 aa19.98■□□□□ 0.79
PDLIM7-215ENST00000506161 ADAMTS5Q9UNA0 930 aa19.98■□□□□ 0.79
PDLIM7-215ENST00000506161 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.98■□□□□ 0.79
PDLIM7-215ENST00000506161 RPTORQ8N122 1335 aa19.98■□□□□ 0.79
PDLIM7-215ENST00000506161 COL6A3P12111 3177 aa19.97■□□□□ 0.79
PDLIM7-215ENST00000506161 ERCC3P19447 782 aa19.97■□□□□ 0.79
PDLIM7-215ENST00000506161 RGS2P41220 211 aa19.97■□□□□ 0.79
PDLIM7-215ENST00000506161 NUCB1Q02818 461 aa19.97■□□□□ 0.79
PDLIM7-215ENST00000506161 NMIQ13287 307 aaPredicted RBP19.97■□□□□ 0.79
PDLIM7-215ENST00000506161 RASGRP2Q7LDG7 609 aa19.97■□□□□ 0.79
PDLIM7-215ENST00000506161 CHD1LQ86WJ1 897 aa19.97■□□□□ 0.79
PDLIM7-215ENST00000506161 NAPBQ9H115 298 aa19.97■□□□□ 0.79
PDLIM7-215ENST00000506161 NYAP2Q9P242 653 aa19.97■□□□□ 0.79
PDLIM7-215ENST00000506161 PLIN4Q96Q06 1357 aa19.96■□□□□ 0.79
PDLIM7-215ENST00000506161 SLC15A5A6NIM6 579 aa19.96■□□□□ 0.79
PDLIM7-215ENST00000506161 COBLO75128 1261 aa19.96■□□□□ 0.79
PDLIM7-215ENST00000506161 NDUFB10O96000 172 aa19.96■□□□□ 0.79
PDLIM7-215ENST00000506161 TFRCP02786 760 aaKnown RBP19.96■□□□□ 0.79
PDLIM7-215ENST00000506161 ZKSCAN1P17029 563 aaPredicted RBP19.96■□□□□ 0.79
PDLIM7-215ENST00000506161 LRRC47Q8N1G4 583 aaKnown RBP19.96■□□□□ 0.79
PDLIM7-215ENST00000506161 TRPV1Q8NER1 839 aa19.96■□□□□ 0.79
PDLIM7-215ENST00000506161 RWDD1Q9H446 243 aaPredicted RBP19.96■□□□□ 0.79
PDLIM7-215ENST00000506161 HMX1Q9NP08 348 aaPredicted RBP19.96■□□□□ 0.79
PDLIM7-215ENST00000506161 HOXC10Q9NYD6 342 aa19.96■□□□□ 0.79
PDLIM7-215ENST00000506161 A0A0C4DFX4 3053 aa19.95■□□□□ 0.78
PDLIM7-215ENST00000506161 F5H6K3 240 aa19.95■□□□□ 0.78
PDLIM7-215ENST00000506161 RAD21O60216 631 aa19.95■□□□□ 0.78
PDLIM7-215ENST00000506161 EVI5O60447 810 aa19.95■□□□□ 0.78
PDLIM7-215ENST00000506161 PDE4AP27815 886 aa19.95■□□□□ 0.78
PDLIM7-215ENST00000506161 CCNA1P78396 465 aa19.95■□□□□ 0.78
PDLIM7-215ENST00000506161 KLRC3Q07444 240 aa19.95■□□□□ 0.78
PDLIM7-215ENST00000506161 PLS1Q14651 629 aa19.95■□□□□ 0.78
PDLIM7-215ENST00000506161 CCAR1Q8IX12 1150 aaKnown RBP19.95■□□□□ 0.78
PDLIM7-215ENST00000506161 PAWRQ96IZ0 340 aaKnown RBP19.95■□□□□ 0.78
PDLIM7-215ENST00000506161 SH2D4AQ9H788 454 aa19.95■□□□□ 0.78
PDLIM7-215ENST00000506161 CLIP2Q9UDT6 1046 aa19.95■□□□□ 0.78
PDLIM7-215ENST00000506161 MCM3APO60318 1980 aa19.95■□□□□ 0.78
PDLIM7-215ENST00000506161 NMT2O60551 498 aa19.94■□□□□ 0.78
PDLIM7-215ENST00000506161 HOXC6P09630 235 aa19.94■□□□□ 0.78
PDLIM7-215ENST00000506161 ADORA2AP29274 412 aa19.94■□□□□ 0.78
PDLIM7-215ENST00000506161 CYP2C19P33261 490 aa19.94■□□□□ 0.78
PDLIM7-215ENST00000506161 AAMPQ13685 434 aa19.94■□□□□ 0.78
PDLIM7-215ENST00000506161 LRRFIP1Q32MZ4 808 aaKnown RBP19.94■□□□□ 0.78
PDLIM7-215ENST00000506161 LHX8Q68G74 356 aa19.94■□□□□ 0.78
PDLIM7-215ENST00000506161 NEDD1Q8NHV4 660 aa19.94■□□□□ 0.78
PDLIM7-215ENST00000506161 CHMP4CQ96CF2 233 aa19.94■□□□□ 0.78
PDLIM7-215ENST00000506161 NBPF3Q9H094 633 aa19.94■□□□□ 0.78
PDLIM7-215ENST00000506161 IL17RBQ9NRM6 502 aa19.94■□□□□ 0.78
PDLIM7-215ENST00000506161 MTMR4Q9NYA4 1195 aa19.94■□□□□ 0.78
PDLIM7-215ENST00000506161 ZBTB47Q9UFB7 747 aaPredicted RBP19.94■□□□□ 0.78
PDLIM7-215ENST00000506161 ZNF214Q9UL59 606 aaPredicted RBP19.94■□□□□ 0.78
PDLIM7-215ENST00000506161 PPP1R9AQ9ULJ8 1098 aa19.94■□□□□ 0.78
PDLIM7-215ENST00000506161 VWA5AO00534 786 aa19.93■□□□□ 0.78
PDLIM7-215ENST00000506161 TFAP4Q01664 338 aa19.93■□□□□ 0.78
PDLIM7-215ENST00000506161 ZNF444Q8N0Y2 327 aaPredicted RBP19.93■□□□□ 0.78
PDLIM7-215ENST00000506161 SHCBP1Q8NEM2 672 aa19.93■□□□□ 0.78
PDLIM7-215ENST00000506161 CWC22Q9HCG8 908 aaKnown RBP19.93■□□□□ 0.78
PDLIM7-215ENST00000506161 GOPCQ9HD26 462 aa19.93■□□□□ 0.78
PDLIM7-215ENST00000506161 HELLSQ9NRZ9 838 aa19.93■□□□□ 0.78
PDLIM7-215ENST00000506161 OGDHLQ9ULD0 1010 aa19.93■□□□□ 0.78
PDLIM7-215ENST00000506161 LCTP09848 1927 aa19.93■□□□□ 0.78
PDLIM7-215ENST00000506161 CUL9Q8IWT3 2517 aa19.93■□□□□ 0.78
PDLIM7-215ENST00000506161 TRIM6-TRIM34B2RNG4 842 aa19.92■□□□□ 0.78
PDLIM7-215ENST00000506161 NCAPG2Q86XI2 1143 aa19.92■□□□□ 0.78
PDLIM7-215ENST00000506161 MKL1Q969V6 931 aa19.92■□□□□ 0.78
PDLIM7-215ENST00000506161 RILPL2Q969X0 211 aa19.92■□□□□ 0.78
PDLIM7-215ENST00000506161 NACAP1Q9BZK3 213 aa19.92■□□□□ 0.78
PDLIM7-215ENST00000506161 IL25Q9H293 177 aa19.92■□□□□ 0.78
PDLIM7-215ENST00000506161 OSBPL3Q9H4L5 887 aa19.92■□□□□ 0.78
PDLIM7-215ENST00000506161 RIPK3Q9Y572 518 aa19.92■□□□□ 0.78
PDLIM7-215ENST00000506161 FGAP02671 866 aa19.91■□□□□ 0.78
PDLIM7-215ENST00000506161 MCMDC2Q4G0Z9 681 aa19.91■□□□□ 0.78
PDLIM7-215ENST00000506161 GPR153Q6NV75 609 aa19.91■□□□□ 0.78
PDLIM7-215ENST00000506161 MB21D1Q8N884 522 aa19.91■□□□□ 0.78
PDLIM7-215ENST00000506161 IVNS1ABPQ9Y6Y0 642 aa19.91■□□□□ 0.78
PDLIM7-215ENST00000506161 PFASO15067 1338 aa19.91■□□□□ 0.78
PDLIM7-215ENST00000506161 HSPD1P10809 573 aaKnown RBP19.9■□□□□ 0.78
PDLIM7-215ENST00000506161 SDSP20132 328 aa19.9■□□□□ 0.78
PDLIM7-215ENST00000506161 ALX1Q15699 326 aa19.9■□□□□ 0.78
PDLIM7-215ENST00000506161 RIOX2Q8IUF8 465 aa19.9■□□□□ 0.78
PDLIM7-215ENST00000506161 ANAPC4Q9UJX5 808 aa19.9■□□□□ 0.78
PDLIM7-215ENST00000506161 PGK2P07205 417 aa19.89■□□□□ 0.77
PDLIM7-215ENST00000506161 FGRP09769 529 aa19.89■□□□□ 0.77
PDLIM7-215ENST00000506161 TSPY3P0CV98 308 aa19.89■□□□□ 0.77
PDLIM7-215ENST00000506161 TSPY8P0CW00 308 aa19.89■□□□□ 0.77
PDLIM7-215ENST00000506161 CYBAP13498 195 aa19.89■□□□□ 0.77
PDLIM7-215ENST00000506161 CAPN2P17655 700 aa19.89■□□□□ 0.77
PDLIM7-215ENST00000506161 HAND2P61296 217 aa19.89■□□□□ 0.77
PDLIM7-215ENST00000506161 PDE4BQ07343 736 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms