RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 RPAP3Q9H6T3 665 aaPredicted RBP12.75□□□□□ -0.37
CPNE4-206ENST00000505957 DAXXQ9UER7 740 aaPredicted RBP12.75□□□□□ -0.37
CPNE4-206ENST00000505957 SEPT4O43236 478 aa12.74□□□□□ -0.37
CPNE4-206ENST00000505957 ADORA2AP29274 412 aa12.74□□□□□ -0.37
CPNE4-206ENST00000505957 GUCY1A2P33402 732 aa12.74□□□□□ -0.37
CPNE4-206ENST00000505957 GABPAQ06546 454 aa12.74□□□□□ -0.37
CPNE4-206ENST00000505957 MAP3K12Q12852 859 aa12.74□□□□□ -0.37
CPNE4-206ENST00000505957 C1orf53Q5VUE5 145 aa12.74□□□□□ -0.37
CPNE4-206ENST00000505957 MAGEB6Q8N7X4 407 aa12.74□□□□□ -0.37
CPNE4-206ENST00000505957 KBTBD3Q8NAB2 608 aa12.74□□□□□ -0.37
CPNE4-206ENST00000505957 MOV10L1Q9BXT6 1211 aaKnown RBP12.74□□□□□ -0.37
CPNE4-206ENST00000505957 LSG1Q9H089 658 aaKnown RBP12.74□□□□□ -0.37
CPNE4-206ENST00000505957 SLC5A4Q9NY91 659 aa12.74□□□□□ -0.37
CPNE4-206ENST00000505957 KBTBD13C9JR72 458 aa12.73□□□□□ -0.37
CPNE4-206ENST00000505957 PLCD1P51178 756 aa12.73□□□□□ -0.37
CPNE4-206ENST00000505957 SMAD3P84022 425 aaKnown RBP12.73□□□□□ -0.37
CPNE4-206ENST00000505957 GJC2Q5T442 439 aaPredicted RBP12.73□□□□□ -0.37
CPNE4-206ENST00000505957 HSCBQ8IWL3 235 aa12.73□□□□□ -0.37
CPNE4-206ENST00000505957 ABRAQ8N0Z2 381 aa12.73□□□□□ -0.37
CPNE4-206ENST00000505957 MB21D1Q8N884 522 aa12.73□□□□□ -0.37
CPNE4-206ENST00000505957 FAM161BQ96MY7 647 aa12.73□□□□□ -0.37
CPNE4-206ENST00000505957 CDX2Q99626 313 aaPredicted RBP12.73□□□□□ -0.37
CPNE4-206ENST00000505957 RIOK1Q9BRS2 568 aaKnown RBP12.73□□□□□ -0.37
CPNE4-206ENST00000505957 FSD1Q9BTV5 496 aa12.73□□□□□ -0.37
CPNE4-206ENST00000505957 SPATC1LQ9H0A9 340 aa12.73□□□□□ -0.37
CPNE4-206ENST00000505957 SEMA6BQ9H3T3 888 aa12.73□□□□□ -0.37
CPNE4-206ENST00000505957 ANO2Q9NQ90 1003 aa12.73□□□□□ -0.37
CPNE4-206ENST00000505957 ATP11BQ9Y2G3 1177 aa12.73□□□□□ -0.37
CPNE4-206ENST00000505957 FRMPD3Q5JV73 1810 aa12.72□□□□□ -0.37
CPNE4-206ENST00000505957 HSPA4P34932 840 aa12.72□□□□□ -0.37
CPNE4-206ENST00000505957 SEPT2Q15019 361 aa12.72□□□□□ -0.37
CPNE4-206ENST00000505957 SHHQ15465 462 aa12.72□□□□□ -0.37
CPNE4-206ENST00000505957 LRRFIP1Q32MZ4 808 aaKnown RBP12.72□□□□□ -0.37
CPNE4-206ENST00000505957 KCNB2Q92953 911 aa12.72□□□□□ -0.37
CPNE4-206ENST00000505957 IL25Q9H293 177 aa12.72□□□□□ -0.37
CPNE4-206ENST00000505957 MROH8Q9H579 483 aa12.72□□□□□ -0.37
CPNE4-206ENST00000505957 PAG1Q9NWQ8 432 aa12.72□□□□□ -0.37
CPNE4-206ENST00000505957 A0A1W2PRG0 241 aa12.71□□□□□ -0.37
CPNE4-206ENST00000505957 COBLO75128 1261 aa12.71□□□□□ -0.37
CPNE4-206ENST00000505957 POLR3DP05423 398 aaPredicted RBP12.71□□□□□ -0.37
CPNE4-206ENST00000505957 ERCC3P19447 782 aa12.71□□□□□ -0.37
CPNE4-206ENST00000505957 C9orf50Q5SZB4 431 aa12.71□□□□□ -0.37
CPNE4-206ENST00000505957 KIAA1211Q6ZU35 1233 aa12.71□□□□□ -0.37
CPNE4-206ENST00000505957 BADQ92934 168 aa12.71□□□□□ -0.37
CPNE4-206ENST00000505957 ANTXR1Q9H6X2 564 aa12.71□□□□□ -0.37
CPNE4-206ENST00000505957 PDLIM7Q9NR12 457 aa12.71□□□□□ -0.37
CPNE4-206ENST00000505957 NRBP1Q9UHY1 535 aa12.71□□□□□ -0.37
CPNE4-206ENST00000505957 MYO5AQ9Y4I1 1855 aaKnown RBP12.71□□□□□ -0.37
CPNE4-206ENST00000505957 ZNF236Q9UL36 1845 aa12.71□□□□□ -0.38
CPNE4-206ENST00000505957 MYH1P12882 1939 aa12.7□□□□□ -0.38
CPNE4-206ENST00000505957 CCDC171Q6TFL3 1326 aa12.7□□□□□ -0.38
CPNE4-206ENST00000505957 TMEM265A0A087WTH1 108 aa12.7□□□□□ -0.38
CPNE4-206ENST00000505957 MAGEB6P1A0A0J9YX57 407 aa12.7□□□□□ -0.38
CPNE4-206ENST00000505957 DSG3P32926 999 aa12.7□□□□□ -0.38
CPNE4-206ENST00000505957 NMIQ13287 307 aaPredicted RBP12.7□□□□□ -0.38
CPNE4-206ENST00000505957 LRRC41Q15345 812 aa12.7□□□□□ -0.38
CPNE4-206ENST00000505957 TTF1Q15361 905 aaPredicted RBP12.7□□□□□ -0.38
CPNE4-206ENST00000505957 TRIM60Q495X7 471 aa12.7□□□□□ -0.38
CPNE4-206ENST00000505957 CWC27Q6UX04 472 aaKnown RBP12.7□□□□□ -0.38
CPNE4-206ENST00000505957 MAFAQ8NHW3 353 aaPredicted RBP12.7□□□□□ -0.38
CPNE4-206ENST00000505957 CRNKL1Q9BZJ0 848 aaKnown RBP12.7□□□□□ -0.38
CPNE4-206ENST00000505957 TANGO6Q9C0B7 1094 aa12.7□□□□□ -0.38
CPNE4-206ENST00000505957 PRDM5Q9NQX1 630 aaPredicted RBP12.7□□□□□ -0.38
CPNE4-206ENST00000505957 UNC80Q8N2C7 3258 aa12.7□□□□□ -0.38
CPNE4-206ENST00000505957 A0A0D9SFI3 127 aa12.69□□□□□ -0.38
CPNE4-206ENST00000505957 TRIM43BA6NCK2 446 aa12.69□□□□□ -0.38
CPNE4-206ENST00000505957 MPHOSPH10O00566 681 aaKnown RBP12.69□□□□□ -0.38
CPNE4-206ENST00000505957 ZFYP08048 801 aaPredicted RBP12.69□□□□□ -0.38
CPNE4-206ENST00000505957 ADCYAP1R1P41586 468 aa12.69□□□□□ -0.38
CPNE4-206ENST00000505957 TMEM179Q6ZVK1 233 aa12.69□□□□□ -0.38
CPNE4-206ENST00000505957 TRIM43Q96BQ3 446 aaPredicted RBP12.69□□□□□ -0.38
CPNE4-206ENST00000505957 MAML3Q96JK9 1138 aa12.69□□□□□ -0.38
CPNE4-206ENST00000505957 DNAJC2Q99543 621 aaKnown RBP12.69□□□□□ -0.38
CPNE4-206ENST00000505957 TTYH1Q9H313 450 aaPredicted RBP12.69□□□□□ -0.38
CPNE4-206ENST00000505957 HELLSQ9NRZ9 838 aa12.69□□□□□ -0.38
CPNE4-206ENST00000505957 MCM9Q9NXL9 1143 aa12.69□□□□□ -0.38
CPNE4-206ENST00000505957 SWAP70Q9UH65 585 aa12.69□□□□□ -0.38
CPNE4-206ENST00000505957 PHF24Q9UPV7 400 aa12.69□□□□□ -0.38
CPNE4-206ENST00000505957 TACC3Q9Y6A5 838 aa12.69□□□□□ -0.38
CPNE4-206ENST00000505957 LTBP2Q14767 1821 aa12.69□□□□□ -0.38
CPNE4-206ENST00000505957 RLFQ13129 1914 aa12.68□□□□□ -0.38
CPNE4-206ENST00000505957 K7ELQ4 463 aaPredicted RBP12.68□□□□□ -0.38
CPNE4-206ENST00000505957 ST18O60284 1047 aa12.68□□□□□ -0.38
CPNE4-206ENST00000505957 SLC25A27O95847 323 aa12.68□□□□□ -0.38
CPNE4-206ENST00000505957 FCER1AP12319 257 aa12.68□□□□□ -0.38
CPNE4-206ENST00000505957 MCM2P49736 904 aa12.68□□□□□ -0.38
CPNE4-206ENST00000505957 FAM47AQ5JRC9 791 aa12.68□□□□□ -0.38
CPNE4-206ENST00000505957 ZMYM1Q5SVZ6 1142 aa12.68□□□□□ -0.38
CPNE4-206ENST00000505957 PRAMEF19Q5SWL8 479 aa12.68□□□□□ -0.38
CPNE4-206ENST00000505957 ANO1Q5XXA6 986 aa12.68□□□□□ -0.38
CPNE4-206ENST00000505957 SH3RF1Q7Z6J0 888 aa12.68□□□□□ -0.38
CPNE4-206ENST00000505957 NCAPG2Q86XI2 1143 aa12.68□□□□□ -0.38
CPNE4-206ENST00000505957 MAP4K1Q92918 833 aa12.68□□□□□ -0.38
CPNE4-206ENST00000505957 FAM227BQ96M60 508 aa12.68□□□□□ -0.38
CPNE4-206ENST00000505957 SH2D4AQ9H788 454 aa12.68□□□□□ -0.38
CPNE4-206ENST00000505957 TMX2Q9Y320 296 aa12.68□□□□□ -0.38
CPNE4-206ENST00000505957 GOLIM4O00461 696 aa12.67□□□□□ -0.38
CPNE4-206ENST00000505957 FLOT1O75955 427 aa12.67□□□□□ -0.38
CPNE4-206ENST00000505957 RARBP10826 455 aa12.67□□□□□ -0.38
CPNE4-206ENST00000505957 PDE6AP16499 860 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms