RNA–Protein interactions for RNA: ENST00000505353.1

SIL1-206, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-206ENST00000505353 HOXD10P28358 340 aa11.17□□□□□ -0.62
SIL1-206ENST00000505353 NT5C2P49902 561 aa11.17□□□□□ -0.62
SIL1-206ENST00000505353 ATP2B2Q01814 1243 aa11.17□□□□□ -0.62
SIL1-206ENST00000505353 COL9A3Q14050 684 aaPredicted RBP11.17□□□□□ -0.62
SIL1-206ENST00000505353 TMEM132BQ14DG7 1078 aa11.17□□□□□ -0.62
SIL1-206ENST00000505353 IMMTQ16891 758 aaKnown RBP11.17□□□□□ -0.62
SIL1-206ENST00000505353 MORN1Q5T089 497 aa11.17□□□□□ -0.62
SIL1-206ENST00000505353 FAM83BQ5T0W9 1011 aa11.17□□□□□ -0.62
SIL1-206ENST00000505353 STOX1Q6ZVD7 989 aa11.17□□□□□ -0.62
SIL1-206ENST00000505353 LRRC47Q8N1G4 583 aaKnown RBP11.17□□□□□ -0.62
SIL1-206ENST00000505353 ATG4CQ96DT6 458 aa11.17□□□□□ -0.62
SIL1-206ENST00000505353 ZNF333Q96JL9 665 aa11.17□□□□□ -0.62
SIL1-206ENST00000505353 TTC14Q96N46 770 aa11.17□□□□□ -0.62
SIL1-206ENST00000505353 PPP1R9AQ9ULJ8 1098 aa11.17□□□□□ -0.62
SIL1-206ENST00000505353 B4E1Z4 1266 aa11.16□□□□□ -0.62
SIL1-206ENST00000505353 VWA5AO00534 786 aa11.16□□□□□ -0.62
SIL1-206ENST00000505353 TNPO2O14787 897 aaKnown RBP11.16□□□□□ -0.62
SIL1-206ENST00000505353 PLA2G6O60733 806 aa11.16□□□□□ -0.62
SIL1-206ENST00000505353 SNHG28P0DPA3 235 aa11.16□□□□□ -0.62
SIL1-206ENST00000505353 NECTIN1Q15223 517 aa11.16□□□□□ -0.62
SIL1-206ENST00000505353 SLFN13Q68D06 897 aa11.16□□□□□ -0.62
SIL1-206ENST00000505353 RASGRP2Q7LDG7 609 aa11.16□□□□□ -0.62
SIL1-206ENST00000505353 GPR142Q7Z601 462 aa11.16□□□□□ -0.62
SIL1-206ENST00000505353 MB21D1Q8N884 522 aa11.16□□□□□ -0.62
SIL1-206ENST00000505353 GMCL1Q96IK5 515 aa11.16□□□□□ -0.62
SIL1-206ENST00000505353 TMEM47Q9BQJ4 181 aa11.16□□□□□ -0.62
SIL1-206ENST00000505353 PAGR1Q9BTK6 254 aa11.16□□□□□ -0.62
SIL1-206ENST00000505353 MOV10L1Q9BXT6 1211 aaKnown RBP11.16□□□□□ -0.62
SIL1-206ENST00000505353 TANGO6Q9C0B7 1094 aa11.16□□□□□ -0.62
SIL1-206ENST00000505353 RNF41Q9H4P4 317 aaPredicted RBP11.16□□□□□ -0.62
SIL1-206ENST00000505353 ZNF214Q9UL59 606 aaPredicted RBP11.16□□□□□ -0.62
SIL1-206ENST00000505353 COL11A1P12107 1806 aaPredicted RBP11.16□□□□□ -0.62
SIL1-206ENST00000505353 CCDC85CA6NKD9 419 aa11.15□□□□□ -0.62
SIL1-206ENST00000505353 ATP2A1O14983 1001 aa11.15□□□□□ -0.62
SIL1-206ENST00000505353 KDM4AO75164 1064 aa11.15□□□□□ -0.62
SIL1-206ENST00000505353 TOP1P11387 765 aaKnown RBP11.15□□□□□ -0.62
SIL1-206ENST00000505353 MAPK4P31152 587 aa11.15□□□□□ -0.62
SIL1-206ENST00000505353 SEC23AQ15436 765 aa11.15□□□□□ -0.62
SIL1-206ENST00000505353 RRP12Q5JTH9 1297 aaKnown RBP11.15□□□□□ -0.62
SIL1-206ENST00000505353 PPP4R3BQ5MIZ7 849 aa11.15□□□□□ -0.62
SIL1-206ENST00000505353 CYB5R4Q7L1T6 521 aa11.15□□□□□ -0.62
SIL1-206ENST00000505353 DGKHQ86XP1 1220 aa11.15□□□□□ -0.62
SIL1-206ENST00000505353 SHCBP1Q8NEM2 672 aa11.15□□□□□ -0.62
SIL1-206ENST00000505353 PXYLP1Q8TE99 480 aa11.15□□□□□ -0.62
SIL1-206ENST00000505353 ESR2Q92731 530 aa11.15□□□□□ -0.62
SIL1-206ENST00000505353 SPATC1LQ9H0A9 340 aa11.15□□□□□ -0.62
SIL1-206ENST00000505353 STX8Q9UNK0 236 aa11.15□□□□□ -0.62
SIL1-206ENST00000505353 RBM8AQ9Y5S9 174 aaKnown RBP11.15□□□□□ -0.62
SIL1-206ENST00000505353 U3KPZ7 1027 aaPredicted RBP11.15□□□□□ -0.62
SIL1-206ENST00000505353 MKI67P46013 3256 aaKnown RBP11.14□□□□□ -0.63
SIL1-206ENST00000505353 BMP3P12645 472 aa11.14□□□□□ -0.63
SIL1-206ENST00000505353 XRCC5P13010 732 aaKnown RBP11.14□□□□□ -0.63
SIL1-206ENST00000505353 MCCP23508 829 aa11.14□□□□□ -0.63
SIL1-206ENST00000505353 GRK4P32298 578 aa11.14□□□□□ -0.63
SIL1-206ENST00000505353 BTNL9Q6UXG8 535 aa11.14□□□□□ -0.63
SIL1-206ENST00000505353 ENAHQ8N8S7 591 aaPredicted RBP11.14□□□□□ -0.63
SIL1-206ENST00000505353 PRPF38AQ8NAV1 312 aaKnown RBP11.14□□□□□ -0.63
SIL1-206ENST00000505353 SH3TC2Q8TF17 1288 aa11.14□□□□□ -0.63
SIL1-206ENST00000505353 COA7Q96BR5 231 aa11.14□□□□□ -0.63
SIL1-206ENST00000505353 ZKSCAN3Q9BRR0 538 aa11.14□□□□□ -0.63
SIL1-206ENST00000505353 FEM1BQ9UK73 627 aa11.14□□□□□ -0.63
SIL1-206ENST00000505353 RIPK3Q9Y572 518 aa11.14□□□□□ -0.63
SIL1-206ENST00000505353 SMCHD1A6NHR9 2005 aa11.14□□□□□ -0.63
SIL1-206ENST00000505353 ZNF536O15090 1300 aa11.13□□□□□ -0.63
SIL1-206ENST00000505353 POTEFA5A3E0 1075 aa11.13□□□□□ -0.63
SIL1-206ENST00000505353 E7EWF7 191 aa11.13□□□□□ -0.63
SIL1-206ENST00000505353 ADCY3O60266 1144 aa11.13□□□□□ -0.63
SIL1-206ENST00000505353 HOXC6P09630 235 aa11.13□□□□□ -0.63
SIL1-206ENST00000505353 PDHBP11177 359 aa11.13□□□□□ -0.63
SIL1-206ENST00000505353 ERCC3P19447 782 aa11.13□□□□□ -0.63
SIL1-206ENST00000505353 PTPREP23469 700 aa11.13□□□□□ -0.63
SIL1-206ENST00000505353 SLC1A4P43007 532 aa11.13□□□□□ -0.63
SIL1-206ENST00000505353 ANTXR2P58335 489 aa11.13□□□□□ -0.63
SIL1-206ENST00000505353 GRB14Q14449 540 aa11.13□□□□□ -0.63
SIL1-206ENST00000505353 TTBK2Q6IQ55 1244 aa11.13□□□□□ -0.63
SIL1-206ENST00000505353 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.13□□□□□ -0.63
SIL1-206ENST00000505353 PLEKHH3Q7Z736 793 aa11.13□□□□□ -0.63
SIL1-206ENST00000505353 RIOX2Q8IUF8 465 aa11.13□□□□□ -0.63
SIL1-206ENST00000505353 KCNB2Q92953 911 aa11.13□□□□□ -0.63
SIL1-206ENST00000505353 ZSCAN10Q96SZ4 725 aaPredicted RBP11.13□□□□□ -0.63
SIL1-206ENST00000505353 SLF1Q9BQI6 1058 aa11.13□□□□□ -0.63
SIL1-206ENST00000505353 KRT23Q9C075 422 aa11.13□□□□□ -0.63
SIL1-206ENST00000505353 CNNM2Q9H8M5 875 aa11.13□□□□□ -0.63
SIL1-206ENST00000505353 SLC38A10Q9HBR0 1119 aa11.13□□□□□ -0.63
SIL1-206ENST00000505353 TOMM22Q9NS69 142 aa11.13□□□□□ -0.63
SIL1-206ENST00000505353 ZNFX1Q9P2E3 1918 aaKnown RBP11.12□□□□□ -0.63
SIL1-206ENST00000505353 SLC15A5A6NIM6 579 aa11.12□□□□□ -0.63
SIL1-206ENST00000505353 TMEM232C9JQI7 657 aa11.12□□□□□ -0.63
SIL1-206ENST00000505353 SLC27A2O14975 620 aa11.12□□□□□ -0.63
SIL1-206ENST00000505353 COBLO75128 1261 aa11.12□□□□□ -0.63
SIL1-206ENST00000505353 CDC45O75419 566 aa11.12□□□□□ -0.63
SIL1-206ENST00000505353 CAPN15O75808 1086 aa11.12□□□□□ -0.63
SIL1-206ENST00000505353 ELNP15502 786 aa11.12□□□□□ -0.63
SIL1-206ENST00000505353 STAT3P40763 770 aa11.12□□□□□ -0.63
SIL1-206ENST00000505353 CCNA1P78396 465 aa11.12□□□□□ -0.63
SIL1-206ENST00000505353 MAP2K5Q13163 448 aa11.12□□□□□ -0.63
SIL1-206ENST00000505353 MTFR1Q15390 333 aa11.12□□□□□ -0.63
SIL1-206ENST00000505353 TSGA10IPQ3SY00 556 aa11.12□□□□□ -0.63
SIL1-206ENST00000505353 SLC9C1Q4G0N8 1177 aa11.12□□□□□ -0.63
SIL1-206ENST00000505353 MAP3K21Q5TCX8 1036 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms