RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 MYO9BQ13459 2157 aa19.36■□□□□ 0.69
PDLIM7-213ENST00000505074 GOLIM4O00461 696 aa19.36■□□□□ 0.69
PDLIM7-213ENST00000505074 COBLO75128 1261 aa19.36■□□□□ 0.69
PDLIM7-213ENST00000505074 POLR3DP05423 398 aaPredicted RBP19.36■□□□□ 0.69
PDLIM7-213ENST00000505074 RARBP10826 455 aa19.36■□□□□ 0.69
PDLIM7-213ENST00000505074 ERCC3P19447 782 aa19.36■□□□□ 0.69
PDLIM7-213ENST00000505074 MRPS5P82675 430 aaKnown RBP19.36■□□□□ 0.69
PDLIM7-213ENST00000505074 AKNAD1Q5T1N1 836 aa19.36■□□□□ 0.69
PDLIM7-213ENST00000505074 SLC9C2Q5TAH2 1124 aa19.36■□□□□ 0.69
PDLIM7-213ENST00000505074 UHRF1Q96T88 793 aaPredicted RBP19.36■□□□□ 0.69
PDLIM7-213ENST00000505074 CHMP4BQ9H444 224 aaKnown RBP19.36■□□□□ 0.69
PDLIM7-213ENST00000505074 RCAN3Q9UKA8 241 aa19.36■□□□□ 0.69
PDLIM7-213ENST00000505074 A0A0G2JMZ2 1700 aa19.36■□□□□ 0.69
PDLIM7-213ENST00000505074 TMED8Q6PL24 325 aaPredicted RBP19.35■□□□□ 0.69
PDLIM7-213ENST00000505074 ABRAQ8N0Z2 381 aa19.35■□□□□ 0.69
PDLIM7-213ENST00000505074 MAML3Q96JK9 1138 aa19.35■□□□□ 0.69
PDLIM7-213ENST00000505074 CRNKL1Q9BZJ0 848 aaKnown RBP19.35■□□□□ 0.69
PDLIM7-213ENST00000505074 EHD4Q9H223 541 aa19.35■□□□□ 0.69
PDLIM7-213ENST00000505074 MROH8Q9H579 483 aa19.35■□□□□ 0.69
PDLIM7-213ENST00000505074 PDE6AP16499 860 aa19.34■□□□□ 0.69
PDLIM7-213ENST00000505074 CCDC129Q6ZRS4 1044 aa19.34■□□□□ 0.69
PDLIM7-213ENST00000505074 ZBTB40Q9NUA8 1239 aa19.34■□□□□ 0.69
PDLIM7-213ENST00000505074 NRBP1Q9UHY1 535 aa19.34■□□□□ 0.69
PDLIM7-213ENST00000505074 ZNF532Q9HCE3 1301 aa19.33■□□□□ 0.69
PDLIM7-213ENST00000505074 A0A1W2PQ45 241 aaPredicted RBP19.33■□□□□ 0.68
PDLIM7-213ENST00000505074 A0A1W2PQY0 241 aa19.33■□□□□ 0.68
PDLIM7-213ENST00000505074 DCDC2CA8MYV0 355 aa19.33■□□□□ 0.68
PDLIM7-213ENST00000505074 RAB11FIP3O75154 756 aa19.33■□□□□ 0.68
PDLIM7-213ENST00000505074 PLS1Q14651 629 aa19.33■□□□□ 0.68
PDLIM7-213ENST00000505074 NCAPG2Q86XI2 1143 aa19.33■□□□□ 0.68
PDLIM7-213ENST00000505074 MB21D1Q8N884 522 aa19.33■□□□□ 0.68
PDLIM7-213ENST00000505074 SLC44A5Q8NCS7 719 aa19.33■□□□□ 0.68
PDLIM7-213ENST00000505074 TOX2Q96NM4 488 aa19.33■□□□□ 0.68
PDLIM7-213ENST00000505074 RIOK1Q9BRS2 568 aaKnown RBP19.33■□□□□ 0.68
PDLIM7-213ENST00000505074 TANGO6Q9C0B7 1094 aa19.33■□□□□ 0.68
PDLIM7-213ENST00000505074 PRDM12Q9H4Q4 367 aa19.33■□□□□ 0.68
PDLIM7-213ENST00000505074 PGK1P00558 417 aa19.32■□□□□ 0.68
PDLIM7-213ENST00000505074 FAAP100Q0VG06 881 aa19.32■□□□□ 0.68
PDLIM7-213ENST00000505074 CCDC174Q6PII3 467 aa19.32■□□□□ 0.68
PDLIM7-213ENST00000505074 ANKRD33Q7Z3H0 272 aa19.32■□□□□ 0.68
PDLIM7-213ENST00000505074 SIRT2Q8IXJ6 389 aa19.32■□□□□ 0.68
PDLIM7-213ENST00000505074 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.32■□□□□ 0.689e-10■■■□□ 15
PDLIM7-213ENST00000505074 MCM9Q9NXL9 1143 aa19.32■□□□□ 0.68
PDLIM7-213ENST00000505074 MPHOSPH10O00566 681 aaKnown RBP19.31■□□□□ 0.68
PDLIM7-213ENST00000505074 TIMP1P01033 207 aa19.31■□□□□ 0.68
PDLIM7-213ENST00000505074 FCER1AP12319 257 aa19.31■□□□□ 0.68
PDLIM7-213ENST00000505074 HOXD11P31277 338 aaPredicted RBP19.31■□□□□ 0.68
PDLIM7-213ENST00000505074 PLCD1P51178 756 aa19.31■□□□□ 0.68
PDLIM7-213ENST00000505074 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.31■□□□□ 0.68
PDLIM7-213ENST00000505074 PBX4Q9BYU1 374 aa19.31■□□□□ 0.68
PDLIM7-213ENST00000505074 BOLA2Q9H3K6 86 aa19.31■□□□□ 0.68
PDLIM7-213ENST00000505074 PAG1Q9NWQ8 432 aa19.31■□□□□ 0.68
PDLIM7-213ENST00000505074 TCF20Q9UGU0 1960 aaKnown RBP19.31■□□□□ 0.68
PDLIM7-213ENST00000505074 MYH8P13535 1937 aa19.31■□□□□ 0.68
PDLIM7-213ENST00000505074 NCOR1O75376 2440 aa19.31■□□□□ 0.68
PDLIM7-213ENST00000505074 PBX2P40425 430 aa19.3■□□□□ 0.68
PDLIM7-213ENST00000505074 PPIGQ13427 754 aaKnown RBP eCLIP19.3■□□□□ 0.688e-7■■■□□ 17.4
PDLIM7-213ENST00000505074 SEPT2Q15019 361 aa19.3■□□□□ 0.68
PDLIM7-213ENST00000505074 CCDC85BQ15834 202 aaPredicted RBP19.3■□□□□ 0.68
PDLIM7-213ENST00000505074 LCORLQ8N3X6 602 aa19.3■□□□□ 0.68
PDLIM7-213ENST00000505074 NUP133Q8WUM0 1156 aa19.3■□□□□ 0.68
PDLIM7-213ENST00000505074 SDR42E1Q8WUS8 393 aa19.3■□□□□ 0.68
PDLIM7-213ENST00000505074 C1QTNF1Q9BXJ1 281 aa19.3■□□□□ 0.68
PDLIM7-213ENST00000505074 STARD7Q9NQZ5 370 aa19.3■□□□□ 0.68
PDLIM7-213ENST00000505074 IGFBP4P22692 258 aa19.29■□□□□ 0.68
PDLIM7-213ENST00000505074 DSG3P32926 999 aa19.29■□□□□ 0.68
PDLIM7-213ENST00000505074 GUCY1A2P33402 732 aa19.29■□□□□ 0.68
PDLIM7-213ENST00000505074 SHMT1P34896 483 aa19.29■□□□□ 0.68
PDLIM7-213ENST00000505074 MFSD5Q6N075 450 aa19.29■□□□□ 0.68
PDLIM7-213ENST00000505074 TSEN34Q9BSV6 310 aaKnown RBP19.29■□□□□ 0.68
PDLIM7-213ENST00000505074 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.29■□□□□ 0.684e-7■■■□□ 16.1
PDLIM7-213ENST00000505074 TSPYL2Q9H2G4 693 aaPredicted RBP19.29■□□□□ 0.68
PDLIM7-213ENST00000505074 ARMT1Q9H993 441 aa19.29■□□□□ 0.68
PDLIM7-213ENST00000505074 COL11A1P12107 1806 aaPredicted RBP19.29■□□□□ 0.68
PDLIM7-213ENST00000505074 PARP14Q460N5 1801 aa19.29■□□□□ 0.68
PDLIM7-213ENST00000505074 GBF1Q92538 1859 aa19.28■□□□□ 0.68
PDLIM7-213ENST00000505074 MYH7P12883 1935 aa19.28■□□□□ 0.68
PDLIM7-213ENST00000505074 GRXCR1A8MXD5 290 aa19.28■□□□□ 0.68
PDLIM7-213ENST00000505074 AKR1A1P14550 325 aa19.28■□□□□ 0.68
PDLIM7-213ENST00000505074 ACLYP53396 1101 aa19.28■□□□□ 0.68
PDLIM7-213ENST00000505074 TINF2Q9BSI4 451 aa19.28■□□□□ 0.68
PDLIM7-213ENST00000505074 ROBO3Q96MS0 1386 aa19.28■□□□□ 0.68
PDLIM7-213ENST00000505074 A0A1W2PRG0 241 aa19.27■□□□□ 0.68
PDLIM7-213ENST00000505074 MBD4O95243 580 aa19.27■□□□□ 0.68
PDLIM7-213ENST00000505074 SLC25A27O95847 323 aa19.27■□□□□ 0.68
PDLIM7-213ENST00000505074 ADGRE1Q14246 886 aa19.27■□□□□ 0.68
PDLIM7-213ENST00000505074 TMEM240Q5SV17 173 aa19.27■□□□□ 0.68
PDLIM7-213ENST00000505074 C20orf194Q5TEA3 1177 aa19.27■□□□□ 0.68
PDLIM7-213ENST00000505074 MMP19Q99542 508 aa19.27■□□□□ 0.68
PDLIM7-213ENST00000505074 LRRCC1Q9C099 1032 aa19.27■□□□□ 0.68
PDLIM7-213ENST00000505074 MSRAQ9UJ68 235 aa19.27■□□□□ 0.68
PDLIM7-213ENST00000505074 TBX21Q9UL17 535 aa19.27■□□□□ 0.68
PDLIM7-213ENST00000505074 MROH7Q68CQ1 1323 aa19.26■□□□□ 0.67
PDLIM7-213ENST00000505074 BAZ2AQ9UIF9 1905 aaKnown RBP19.26■□□□□ 0.67
PDLIM7-213ENST00000505074 TCRBV5S4A2TA0A5A2 114 aa19.26■□□□□ 0.67
PDLIM7-213ENST00000505074 MOXD2PA6NHM9 499 aa19.26■□□□□ 0.67
PDLIM7-213ENST00000505074 ADAMTS4O75173 837 aa19.26■□□□□ 0.67
PDLIM7-213ENST00000505074 FLOT1O75955 427 aa19.26■□□□□ 0.67
PDLIM7-213ENST00000505074 CYP2D6P10635 497 aa19.26■□□□□ 0.67
PDLIM7-213ENST00000505074 ATP5JP18859 108 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms