RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 RAET1EQ8TD07 263 aa11.59□□□□□ -0.55
NR1I3-220ENST00000505005 ACER1Q8TDN7 264 aa11.59□□□□□ -0.55
NR1I3-220ENST00000505005 PXYLP1Q8TE99 480 aa11.59□□□□□ -0.55
NR1I3-220ENST00000505005 DCAF4Q8WV16 495 aa11.59□□□□□ -0.55
NR1I3-220ENST00000505005 CEP95Q96GE4 821 aa11.59□□□□□ -0.55
NR1I3-220ENST00000505005 P2RX7Q99572 595 aaKnown RBP11.59□□□□□ -0.55
NR1I3-220ENST00000505005 ESYT1Q9BSJ8 1104 aa11.59□□□□□ -0.55
NR1I3-220ENST00000505005 MCOLN1Q9GZU1 580 aa11.59□□□□□ -0.55
NR1I3-220ENST00000505005 SRRDQ9UH36 339 aa11.59□□□□□ -0.55
NR1I3-220ENST00000505005 RAD21O60216 631 aa11.58□□□□□ -0.56
NR1I3-220ENST00000505005 PRDM1O75626 825 aa11.58□□□□□ -0.56
NR1I3-220ENST00000505005 SLURP2P0DP57 97 aa11.58□□□□□ -0.56
NR1I3-220ENST00000505005 BMP3P12645 472 aa11.58□□□□□ -0.56
NR1I3-220ENST00000505005 NOVP48745 357 aa11.58□□□□□ -0.56
NR1I3-220ENST00000505005 STAT2P52630 851 aa11.58□□□□□ -0.56
NR1I3-220ENST00000505005 JAG1P78504 1218 aa11.58□□□□□ -0.56
NR1I3-220ENST00000505005 SLFN13Q68D06 897 aa11.58□□□□□ -0.56
NR1I3-220ENST00000505005 CCDC84Q86UT8 332 aaPredicted RBP11.58□□□□□ -0.56
NR1I3-220ENST00000505005 ABRAQ8N0Z2 381 aa11.58□□□□□ -0.56
NR1I3-220ENST00000505005 SLAIN1Q8ND83 568 aa11.58□□□□□ -0.56
NR1I3-220ENST00000505005 NKX2-3Q8TAU0 364 aa11.58□□□□□ -0.56
NR1I3-220ENST00000505005 NUDT12Q9BQG2 462 aa11.58□□□□□ -0.56
NR1I3-220ENST00000505005 FBXO40Q9UH90 709 aa11.58□□□□□ -0.56
NR1I3-220ENST00000505005 A0A1W2PRG0 241 aa11.57□□□□□ -0.56
NR1I3-220ENST00000505005 ATP2A1O14983 1001 aa11.57□□□□□ -0.56
NR1I3-220ENST00000505005 FOXP2O15409 715 aa11.57□□□□□ -0.56
NR1I3-220ENST00000505005 XRCC5P13010 732 aaKnown RBP11.57□□□□□ -0.56
NR1I3-220ENST00000505005 MCCP23508 829 aa11.57□□□□□ -0.56
NR1I3-220ENST00000505005 TKFCQ3LXA3 575 aa11.57□□□□□ -0.56
NR1I3-220ENST00000505005 SLC9C1Q4G0N8 1177 aa11.57□□□□□ -0.56
NR1I3-220ENST00000505005 STK11IPQ8N1F8 1099 aa11.57□□□□□ -0.56
NR1I3-220ENST00000505005 ANKS1AQ92625 1134 aa11.57□□□□□ -0.56
NR1I3-220ENST00000505005 SLF1Q9BQI6 1058 aa11.57□□□□□ -0.56
NR1I3-220ENST00000505005 TMEM106CQ9BVX2 250 aa11.57□□□□□ -0.56
NR1I3-220ENST00000505005 KAT14Q9H8E8 782 aa11.57□□□□□ -0.56
NR1I3-220ENST00000505005 ANO2Q9NQ90 1003 aa11.57□□□□□ -0.56
NR1I3-220ENST00000505005 PPP1R9AQ9ULJ8 1098 aa11.57□□□□□ -0.56
NR1I3-220ENST00000505005 ADAMTS5Q9UNA0 930 aa11.57□□□□□ -0.56
NR1I3-220ENST00000505005 GREB1LQ9C091 1923 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-220ENST00000505005 MYH4Q9Y623 1939 aa11.56□□□□□ -0.56
NR1I3-220ENST00000505005 RGS2P41220 211 aa11.56□□□□□ -0.56
NR1I3-220ENST00000505005 HAND2P61296 217 aa11.56□□□□□ -0.56
NR1I3-220ENST00000505005 IKQ13123 557 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-220ENST00000505005 MKRN4PQ13434 485 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-220ENST00000505005 FAM47AQ5JRC9 791 aa11.56□□□□□ -0.56
NR1I3-220ENST00000505005 PLEKHH3Q7Z736 793 aa11.56□□□□□ -0.56
NR1I3-220ENST00000505005 SIAH1Q8IUQ4 282 aa11.56□□□□□ -0.56
NR1I3-220ENST00000505005 IL27Q8NEV9 243 aa11.56□□□□□ -0.56
NR1I3-220ENST00000505005 ABHD8Q96I13 439 aa11.56□□□□□ -0.56
NR1I3-220ENST00000505005 TMEM87BQ96K49 555 aa11.56□□□□□ -0.56
NR1I3-220ENST00000505005 ZSCAN10Q96SZ4 725 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-220ENST00000505005 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.56□□□□□ -0.56
NR1I3-220ENST00000505005 R3HDMLQ9H3Y0 253 aa11.56□□□□□ -0.56
NR1I3-220ENST00000505005 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-220ENST00000505005 RBPJLQ9UBG7 517 aa11.56□□□□□ -0.56
NR1I3-220ENST00000505005 SLC15A5A6NIM6 579 aa11.55□□□□□ -0.56
NR1I3-220ENST00000505005 SPDYE4A6NLX3 237 aa11.55□□□□□ -0.56
NR1I3-220ENST00000505005 SPDYE16A6NNV3 312 aaPredicted RBP11.55□□□□□ -0.56
NR1I3-220ENST00000505005 KDM4AO75164 1064 aa11.55□□□□□ -0.56
NR1I3-220ENST00000505005 NDUFB10O96000 172 aa11.55□□□□□ -0.56
NR1I3-220ENST00000505005 PSMA5P28066 241 aa11.55□□□□□ -0.56
NR1I3-220ENST00000505005 GRK4P32298 578 aa11.55□□□□□ -0.56
NR1I3-220ENST00000505005 MCM5P33992 734 aa11.55□□□□□ -0.56
NR1I3-220ENST00000505005 STAT3P40763 770 aa11.55□□□□□ -0.56
NR1I3-220ENST00000505005 TSGA10IPQ3SY00 556 aa11.55□□□□□ -0.56
NR1I3-220ENST00000505005 ASPRV1Q53RT3 343 aa11.55□□□□□ -0.56
NR1I3-220ENST00000505005 IFIT1BQ5T764 474 aaKnown RBP11.55□□□□□ -0.56
NR1I3-220ENST00000505005 IFFO2Q5TF58 517 aa11.55□□□□□ -0.56
NR1I3-220ENST00000505005 MAP3K14Q99558 947 aa11.55□□□□□ -0.56
NR1I3-220ENST00000505005 PAGR1Q9BTK6 254 aa11.55□□□□□ -0.56
NR1I3-220ENST00000505005 TEX13BQ9BXU2 312 aa11.55□□□□□ -0.56
NR1I3-220ENST00000505005 SPATC1LQ9H0A9 340 aa11.55□□□□□ -0.56
NR1I3-220ENST00000505005 LAMA4Q16363 1823 aa11.55□□□□□ -0.56
NR1I3-220ENST00000505005 B4DLN1 442 aa11.54□□□□□ -0.56
NR1I3-220ENST00000505005 VWA5AO00534 786 aa11.54□□□□□ -0.56
NR1I3-220ENST00000505005 CYP21A2P08686 494 aa11.54□□□□□ -0.56
NR1I3-220ENST00000505005 CALM1P0DP23 149 aa11.54□□□□□ -0.56
NR1I3-220ENST00000505005 CALM2P0DP24 149 aa11.54□□□□□ -0.56
NR1I3-220ENST00000505005 CALM3P0DP25 149 aa11.54□□□□□ -0.56
NR1I3-220ENST00000505005 FCER1AP12319 257 aa11.54□□□□□ -0.56
NR1I3-220ENST00000505005 MRPL12P52815 198 aaKnown RBP11.54□□□□□ -0.56
NR1I3-220ENST00000505005 PPP2R5BQ15173 497 aa11.54□□□□□ -0.56
NR1I3-220ENST00000505005 FAM83BQ5T0W9 1011 aa11.54□□□□□ -0.56
NR1I3-220ENST00000505005 SYNE3Q6ZMZ3 975 aa11.54□□□□□ -0.56
NR1I3-220ENST00000505005 RIOX2Q8IUF8 465 aa11.54□□□□□ -0.56
NR1I3-220ENST00000505005 SPICE1Q8N0Z3 855 aa11.54□□□□□ -0.56
NR1I3-220ENST00000505005 CHST13Q8NET6 341 aa11.54□□□□□ -0.56
NR1I3-220ENST00000505005 ARMC5Q96C12 935 aa11.54□□□□□ -0.56
NR1I3-220ENST00000505005 MPHOSPH6Q99547 160 aaKnown RBP11.54□□□□□ -0.56
NR1I3-220ENST00000505005 TMEM47Q9BQJ4 181 aa11.54□□□□□ -0.56
NR1I3-220ENST00000505005 IL17RBQ9NRM6 502 aa11.54□□□□□ -0.56
NR1I3-220ENST00000505005 ZSWIM5Q9P217 1185 aa11.54□□□□□ -0.56
NR1I3-220ENST00000505005 BIN2Q9UBW5 565 aaPredicted RBP11.54□□□□□ -0.56
NR1I3-220ENST00000505005 ISY1Q9ULR0 285 aaKnown RBP11.54□□□□□ -0.56
NR1I3-220ENST00000505005 HPS5Q9UPZ3 1129 aa11.54□□□□□ -0.56
NR1I3-220ENST00000505005 DIS3Q9Y2L1 958 aaKnown RBP11.54□□□□□ -0.56
NR1I3-220ENST00000505005 RBM8AQ9Y5S9 174 aaKnown RBP11.54□□□□□ -0.56
NR1I3-220ENST00000505005 MGAMO43451 1857 aa11.54□□□□□ -0.56
NR1I3-220ENST00000505005 WDR19Q8NEZ3 1342 aa11.54□□□□□ -0.56
NR1I3-220ENST00000505005 TMEM232C9JQI7 657 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms