RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 LTBP3Q9NS15 1303 aa4.89□□□□□ -1.63
RFC1-209ENST00000504974 TMEM265A0A087WTH1 108 aa4.88□□□□□ -1.63
RFC1-209ENST00000504974 H3BS24 57 aa4.88□□□□□ -1.63
RFC1-209ENST00000504974 KLF4O43474 513 aa4.88□□□□□ -1.63
RFC1-209ENST00000504974 CYP7A1P22680 504 aa4.88□□□□□ -1.63
RFC1-209ENST00000504974 CCNFP41002 786 aa4.88□□□□□ -1.63
RFC1-209ENST00000504974 CASP7P55210 303 aa4.88□□□□□ -1.63
RFC1-209ENST00000504974 RBL2Q08999 1139 aa4.88□□□□□ -1.63
RFC1-209ENST00000504974 IKZF1Q13422 519 aa4.88□□□□□ -1.63
RFC1-209ENST00000504974 BMS1Q14692 1282 aaKnown RBP4.88□□□□□ -1.63
RFC1-209ENST00000504974 SOGA3Q5TF21 947 aa4.88□□□□□ -1.63
RFC1-209ENST00000504974 DPH6Q7L8W6 267 aa4.88□□□□□ -1.63
RFC1-209ENST00000504974 CCDC144CPQ8IYA2 1237 aa4.88□□□□□ -1.63
RFC1-209ENST00000504974 MICAL1Q8TDZ2 1067 aa4.88□□□□□ -1.63
RFC1-209ENST00000504974 LNPKQ9C0E8 428 aa4.88□□□□□ -1.63
RFC1-209ENST00000504974 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.88□□□□□ -1.63
RFC1-209ENST00000504974 ZSWIM4Q9H7M6 989 aa4.88□□□□□ -1.63
RFC1-209ENST00000504974 PHAXQ9H814 394 aaKnown RBP4.88□□□□□ -1.63
RFC1-209ENST00000504974 SUCOQ9UBS9 1254 aaKnown RBP4.88□□□□□ -1.63
RFC1-209ENST00000504974 GTF2IRD1Q9UHL9 959 aa4.88□□□□□ -1.63
RFC1-209ENST00000504974 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.88□□□□□ -1.63
RFC1-209ENST00000504974 GNAT3A8MTJ3 354 aa4.87□□□□□ -1.63
RFC1-209ENST00000504974 C9IYK1 514 aa4.87□□□□□ -1.63
RFC1-209ENST00000504974 LRRN2O75325 713 aa4.87□□□□□ -1.63
RFC1-209ENST00000504974 PMS1P54277 932 aaKnown RBP4.87□□□□□ -1.63
RFC1-209ENST00000504974 SLC7A5Q01650 507 aa4.87□□□□□ -1.63
RFC1-209ENST00000504974 ZP2Q05996 745 aa4.87□□□□□ -1.63
RFC1-209ENST00000504974 DDR2Q16832 855 aa4.87□□□□□ -1.63
RFC1-209ENST00000504974 CCDC144BQ3MJ40 725 aa4.87□□□□□ -1.63
RFC1-209ENST00000504974 SFRP5Q5T4F7 317 aa4.87□□□□□ -1.63
RFC1-209ENST00000504974 FYB2Q5VWT5 728 aa4.87□□□□□ -1.63
RFC1-209ENST00000504974 KIAA1211LQ6NV74 962 aa4.87□□□□□ -1.63
RFC1-209ENST00000504974 FAM178BQ8IXR5 827 aa4.87□□□□□ -1.63
RFC1-209ENST00000504974 STK11IPQ8N1F8 1099 aa4.87□□□□□ -1.63
RFC1-209ENST00000504974 MISP3Q96FF7 219 aa4.87□□□□□ -1.63
RFC1-209ENST00000504974 SRPK1Q96SB4 655 aaKnown RBP4.87□□□□□ -1.63
RFC1-209ENST00000504974 OSBPL2Q9H1P3 480 aa4.87□□□□□ -1.63
RFC1-209ENST00000504974 SEMA3GQ9NS98 782 aa4.87□□□□□ -1.63
RFC1-209ENST00000504974 MAPK8IP1Q9UQF2 711 aa4.87□□□□□ -1.63
RFC1-209ENST00000504974 FAM155AB1AL88 458 aaPredicted RBP4.86□□□□□ -1.63
RFC1-209ENST00000504974 IGF2BP3O00425 579 aaKnown RBP eCLIP4.86□□□□□ -1.63
RFC1-209ENST00000504974 GJB6O95452 261 aa4.86□□□□□ -1.63
RFC1-209ENST00000504974 RNF4P78317 190 aa4.86□□□□□ -1.63
RFC1-209ENST00000504974 BBS9Q3SYG4 887 aa4.86□□□□□ -1.63
RFC1-209ENST00000504974 ZNF648Q5T619 568 aaPredicted RBP4.86□□□□□ -1.63
RFC1-209ENST00000504974 NBPF6Q5VWK0 638 aa4.86□□□□□ -1.63
RFC1-209ENST00000504974 DCAF15Q66K64 600 aa4.86□□□□□ -1.63
RFC1-209ENST00000504974 PPFIBP1Q86W92 1011 aa4.86□□□□□ -1.63
RFC1-209ENST00000504974 PPP1R14AQ96A00 147 aa4.86□□□□□ -1.63
RFC1-209ENST00000504974 NBPF4Q96M43 638 aa4.86□□□□□ -1.63
RFC1-209ENST00000504974 CARS2Q9HA77 564 aaKnown RBP4.86□□□□□ -1.63
RFC1-209ENST00000504974 MKNK2Q9HBH9 465 aa4.86□□□□□ -1.63
RFC1-209ENST00000504974 FBXL21Q9UKT6 434 aa4.86□□□□□ -1.63
RFC1-209ENST00000504974 ZNF214Q9UL59 606 aaPredicted RBP4.86□□□□□ -1.63
RFC1-209ENST00000504974 PITPNM2Q9BZ72 1349 aa4.86□□□□□ -1.63
RFC1-209ENST00000504974 TNK2Q07912 1038 aa4.85□□□□□ -1.63
RFC1-209ENST00000504974 NCAPHQ15003 741 aa4.85□□□□□ -1.63
RFC1-209ENST00000504974 ZNF124Q15973 351 aa4.85□□□□□ -1.63
RFC1-209ENST00000504974 AXDND1Q5T1B0 1012 aaPredicted RBP4.85□□□□□ -1.63
RFC1-209ENST00000504974 NBPF12Q5TAG4 269 aaPredicted RBP4.85□□□□□ -1.63
RFC1-209ENST00000504974 ANGEL2Q5VTE6 544 aaKnown RBP4.85□□□□□ -1.63
RFC1-209ENST00000504974 HEATR6Q6AI08 1181 aaKnown RBP4.85□□□□□ -1.63
RFC1-209ENST00000504974 ADAT2Q7Z6V5 191 aaKnown RBP4.85□□□□□ -1.63
RFC1-209ENST00000504974 MFSD4AQ8N468 514 aa4.85□□□□□ -1.63
RFC1-209ENST00000504974 RNF141Q8WVD5 230 aa4.85□□□□□ -1.63
RFC1-209ENST00000504974 UBE2FQ969M7 185 aa4.85□□□□□ -1.63
RFC1-209ENST00000504974 ASPNQ9BXN1 380 aa4.85□□□□□ -1.63
RFC1-209ENST00000504974 KCNK12Q9HB15 430 aa4.85□□□□□ -1.63
RFC1-209ENST00000504974 SIRPGQ9P1W8 387 aa4.85□□□□□ -1.63
RFC1-209ENST00000504974 ZSWIM5Q9P217 1185 aa4.85□□□□□ -1.63
RFC1-209ENST00000504974 ST14Q9Y5Y6 855 aa4.85□□□□□ -1.63
RFC1-209ENST00000504974 CAPN6Q9Y6Q1 641 aa4.85□□□□□ -1.63
RFC1-209ENST00000504974 MEIS1O00470 390 aa4.84□□□□□ -1.63
RFC1-209ENST00000504974 TXKP42681 527 aa4.84□□□□□ -1.63
RFC1-209ENST00000504974 ADCY4Q8NFM4 1077 aa4.84□□□□□ -1.63
RFC1-209ENST00000504974 KLHL6Q8WZ60 621 aa4.84□□□□□ -1.63
RFC1-209ENST00000504974 FAM168AQ92567 244 aa4.84□□□□□ -1.63
RFC1-209ENST00000504974 Q96M66 194 aa4.84□□□□□ -1.63
RFC1-209ENST00000504974 FGD4Q96M96 766 aa4.84□□□□□ -1.63
RFC1-209ENST00000504974 DEPDC7Q96QD5 511 aa4.84□□□□□ -1.63
RFC1-209ENST00000504974 HAUS7Q99871 368 aa4.84□□□□□ -1.63
RFC1-209ENST00000504974 ASCC2Q9H1I8 757 aaPredicted RBP4.84□□□□□ -1.63
RFC1-209ENST00000504974 KCNH3Q9ULD8 1083 aa4.84□□□□□ -1.63
RFC1-209ENST00000504974 SUGT1Q9Y2Z0 365 aa4.84□□□□□ -1.63
RFC1-209ENST00000504974 PCDHB12Q9Y5F1 795 aa4.84□□□□□ -1.63
RFC1-209ENST00000504974 SNX11Q9Y5W9 270 aa4.84□□□□□ -1.63
RFC1-209ENST00000504974 EPHX1P07099 455 aa4.83□□□□□ -1.64
RFC1-209ENST00000504974 KIR3DL1P43629 444 aa4.83□□□□□ -1.64
RFC1-209ENST00000504974 SERINC3Q13530 473 aa4.83□□□□□ -1.64
RFC1-209ENST00000504974 SNW1Q13573 536 aaKnown RBP4.83□□□□□ -1.64
RFC1-209ENST00000504974 AUHQ13825 339 aaKnown RBP4.83□□□□□ -1.64
RFC1-209ENST00000504974 TCEAL1Q15170 157 aa4.83□□□□□ -1.64
RFC1-209ENST00000504974 NFE2L2Q16236 605 aa4.83□□□□□ -1.64
RFC1-209ENST00000504974 CLEC16AQ2KHT3 1053 aa4.83□□□□□ -1.64
RFC1-209ENST00000504974 SV2CQ496J9 727 aa4.83□□□□□ -1.64
RFC1-209ENST00000504974 NOL9Q5SY16 702 aaKnown RBP4.83□□□□□ -1.64
RFC1-209ENST00000504974 MRM1Q6IN84 353 aaKnown RBP4.83□□□□□ -1.64
RFC1-209ENST00000504974 SLC23A3Q6PIS1 610 aa4.83□□□□□ -1.64
RFC1-209ENST00000504974 EEPD1Q7L9B9 569 aa4.83□□□□□ -1.64
RFC1-209ENST00000504974 DTWD2Q8NBA8 298 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms