RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 FOXP2O15409 715 aa15.8■□□□□ 0.12
DDX41-204ENST00000504807 USP14P54578 494 aa15.8■□□□□ 0.12
DDX41-204ENST00000504807 LBX2Q6XYB7 198 aa15.8■□□□□ 0.12
DDX41-204ENST00000504807 TMEM179Q6ZVK1 233 aa15.8■□□□□ 0.12
DDX41-204ENST00000504807 PLEKHH3Q7Z736 793 aa15.8■□□□□ 0.12
DDX41-204ENST00000504807 NUDT12Q9BQG2 462 aa15.8■□□□□ 0.12
DDX41-204ENST00000504807 THEGQ9P2T0 379 aa15.8■□□□□ 0.12
DDX41-204ENST00000504807 RABGAP1Q9Y3P9 1069 aa15.8■□□□□ 0.12
DDX41-204ENST00000504807 MYH8P13535 1937 aa15.8■□□□□ 0.12
DDX41-204ENST00000504807 RNF113AO15541 343 aaKnown RBP15.79■□□□□ 0.12
DDX41-204ENST00000504807 MAPK4P31152 587 aa15.79■□□□□ 0.12
DDX41-204ENST00000504807 ICA1Q05084 483 aa15.79■□□□□ 0.12
DDX41-204ENST00000504807 IL27Q8NEV9 243 aa15.79■□□□□ 0.12
DDX41-204ENST00000504807 NPLOC4Q8TAT6 608 aa15.79■□□□□ 0.12
DDX41-204ENST00000504807 APPBP2Q92624 585 aa15.79■□□□□ 0.12
DDX41-204ENST00000504807 C1QTNF1Q9BXJ1 281 aa15.79■□□□□ 0.12
DDX41-204ENST00000504807 SWAP70Q9UH65 585 aa15.79■□□□□ 0.12
DDX41-204ENST00000504807 TMX2Q9Y320 296 aa15.79■□□□□ 0.12
DDX41-204ENST00000504807 HCN4Q9Y3Q4 1203 aa15.79■□□□□ 0.12
DDX41-204ENST00000504807 ROBO3Q96MS0 1386 aa15.78■□□□□ 0.12
DDX41-204ENST00000504807 GPAA1O43292 621 aa15.78■□□□□ 0.12
DDX41-204ENST00000504807 IGHA2P01877 340 aa15.78■□□□□ 0.12
DDX41-204ENST00000504807 XRCC5P13010 732 aaKnown RBP15.78■□□□□ 0.12
DDX41-204ENST00000504807 EEF2P13639 858 aaKnown RBP15.78■□□□□ 0.12
DDX41-204ENST00000504807 RASA1P20936 1047 aa15.78■□□□□ 0.12
DDX41-204ENST00000504807 NECAB3Q96P71 396 aaPredicted RBP15.78■□□□□ 0.12
DDX41-204ENST00000504807 FBXO28Q9NVF7 368 aa15.78■□□□□ 0.12
DDX41-204ENST00000504807 PTPREP23469 700 aa15.77■□□□□ 0.12
DDX41-204ENST00000504807 MRPS5P82675 430 aaKnown RBP15.77■□□□□ 0.12
DDX41-204ENST00000504807 SOCS4Q8WXH5 440 aa15.77■□□□□ 0.12
DDX41-204ENST00000504807 ATG4CQ96DT6 458 aa15.77■□□□□ 0.12
DDX41-204ENST00000504807 RNPC3Q96LT9 517 aaKnown RBP15.77■□□□□ 0.12
DDX41-204ENST00000504807 MOV10L1Q9BXT6 1211 aaKnown RBP15.77■□□□□ 0.12
DDX41-204ENST00000504807 TANGO6Q9C0B7 1094 aa15.77■□□□□ 0.12
DDX41-204ENST00000504807 VCPKMTQ9H867 229 aa15.77■□□□□ 0.12
DDX41-204ENST00000504807 TACC3Q9Y6A5 838 aa15.77■□□□□ 0.12
DDX41-204ENST00000504807 MAP2K5Q13163 448 aa15.76■□□□□ 0.11
DDX41-204ENST00000504807 SBK1Q52WX2 424 aa15.76■□□□□ 0.11
DDX41-204ENST00000504807 ZSCAN25Q6NSZ9 544 aa15.76■□□□□ 0.11
DDX41-204ENST00000504807 CCDC129Q6ZRS4 1044 aa15.76■□□□□ 0.11
DDX41-204ENST00000504807 TRMT44Q8IYL2 757 aaKnown RBP15.76■□□□□ 0.11
DDX41-204ENST00000504807 TRPV1Q8NER1 839 aa15.76■□□□□ 0.11
DDX41-204ENST00000504807 GTF3C2Q8WUA4 911 aaPredicted RBP15.76■□□□□ 0.11
DDX41-204ENST00000504807 APBA2Q99767 749 aa15.76■□□□□ 0.11
DDX41-204ENST00000504807 TTC41PQ6P2S7 1318 aa15.75■□□□□ 0.11
DDX41-204ENST00000504807 PRDM1O75626 825 aa15.75■□□□□ 0.11
DDX41-204ENST00000504807 MX1P20591 662 aa15.75■□□□□ 0.11
DDX41-204ENST00000504807 DNAJB2P25686 324 aa15.75■□□□□ 0.11
DDX41-204ENST00000504807 DSG3P32926 999 aa15.75■□□□□ 0.11
DDX41-204ENST00000504807 GRB14Q14449 540 aa15.75■□□□□ 0.11
DDX41-204ENST00000504807 COG2Q14746 738 aa15.75■□□□□ 0.11
DDX41-204ENST00000504807 WDR78Q5VTH9 848 aa15.75■□□□□ 0.11
DDX41-204ENST00000504807 ALYREFQ86V81 257 aaKnown RBP15.75■□□□□ 0.11
DDX41-204ENST00000504807 NUP88Q99567 741 aaPredicted RBP15.75■□□□□ 0.11
DDX41-204ENST00000504807 ZNF576Q9H609 170 aa15.75■□□□□ 0.11
DDX41-204ENST00000504807 ARPP21Q9UBL0 812 aaPredicted RBP15.75■□□□□ 0.11
DDX41-204ENST00000504807 ARIH1Q9Y4X5 557 aaPredicted RBP15.75■□□□□ 0.11
DDX41-204ENST00000504807 LTBP2Q14767 1821 aa15.75■□□□□ 0.11
DDX41-204ENST00000504807 FRMPD3Q5JV73 1810 aa15.75■□□□□ 0.11
DDX41-204ENST00000504807 ZNF236Q9UL36 1845 aa15.75■□□□□ 0.11
DDX41-204ENST00000504807 COL11A1P12107 1806 aaPredicted RBP15.74■□□□□ 0.11
DDX41-204ENST00000504807 IGKV6D-41A0A0C4DH26 115 aa15.74■□□□□ 0.11
DDX41-204ENST00000504807 MINDY4BA8MYZ0 360 aa15.74■□□□□ 0.11
DDX41-204ENST00000504807 COBLO75128 1261 aa15.74■□□□□ 0.11
DDX41-204ENST00000504807 RGS2P41220 211 aa15.74■□□□□ 0.11
DDX41-204ENST00000504807 TMEM132BQ14DG7 1078 aa15.74■□□□□ 0.11
DDX41-204ENST00000504807 CCDC85BQ15834 202 aaPredicted RBP15.74■□□□□ 0.11
DDX41-204ENST00000504807 ZMYM1Q5SVZ6 1142 aa15.74■□□□□ 0.11
DDX41-204ENST00000504807 SH3RF1Q7Z6J0 888 aa15.74■□□□□ 0.11
DDX41-204ENST00000504807 SNX27Q96L92 541 aa15.74■□□□□ 0.11
DDX41-204ENST00000504807 CCDC17Q96LX7 622 aa15.74■□□□□ 0.11
DDX41-204ENST00000504807 LRFN3Q9BTN0 628 aa15.74■□□□□ 0.11
DDX41-204ENST00000504807 SPATC1LQ9H0A9 340 aa15.74■□□□□ 0.11
DDX41-204ENST00000504807 INCENPQ9NQS7 918 aa15.74■□□□□ 0.11
DDX41-204ENST00000504807 SLC15A5A6NIM6 579 aa15.73■□□□□ 0.11
DDX41-204ENST00000504807 FLOT1O75955 427 aa15.73■□□□□ 0.11
DDX41-204ENST00000504807 ERCC3P19447 782 aa15.73■□□□□ 0.11
DDX41-204ENST00000504807 CNGA1P29973 690 aa15.73■□□□□ 0.11
DDX41-204ENST00000504807 CYP2C19P33261 490 aa15.73■□□□□ 0.11
DDX41-204ENST00000504807 ATP2B2Q01814 1243 aa15.73■□□□□ 0.11
DDX41-204ENST00000504807 TRIM60Q495X7 471 aa15.73■□□□□ 0.11
DDX41-204ENST00000504807 FAM83BQ5T0W9 1011 aa15.73■□□□□ 0.11
DDX41-204ENST00000504807 SAMD1Q6SPF0 538 aaPredicted RBP15.73■□□□□ 0.11
DDX41-204ENST00000504807 CCAR1Q8IX12 1150 aaKnown RBP15.73■□□□□ 0.11
DDX41-204ENST00000504807 REPS2Q8NFH8 660 aa15.73■□□□□ 0.11
DDX41-204ENST00000504807 GPATCH3Q96I76 525 aa15.73■□□□□ 0.11
DDX41-204ENST00000504807 GAS2L1Q99501 681 aaPredicted RBP15.73■□□□□ 0.11
DDX41-204ENST00000504807 ARHGEF10LQ9HCE6 1279 aa15.73■□□□□ 0.11
DDX41-204ENST00000504807 ADAMTS5Q9UNA0 930 aa15.73■□□□□ 0.11
DDX41-204ENST00000504807 TRIM43BA6NCK2 446 aa15.72■□□□□ 0.11
DDX41-204ENST00000504807 DNM1LO00429 736 aa15.72■□□□□ 0.11
DDX41-204ENST00000504807 GLRX3O76003 335 aaKnown RBP15.72■□□□□ 0.11
DDX41-204ENST00000504807 HOXC6P09630 235 aa15.72■□□□□ 0.11
DDX41-204ENST00000504807 EPHB4P54760 987 aa15.72■□□□□ 0.11
DDX41-204ENST00000504807 GJC2Q5T442 439 aaPredicted RBP15.72■□□□□ 0.11
DDX41-204ENST00000504807 ANKRD45Q5TZF3 282 aa15.72■□□□□ 0.11
DDX41-204ENST00000504807 VPS53Q5VIR6 699 aa15.72■□□□□ 0.11
DDX41-204ENST00000504807 GIMAP6Q6P9H5 292 aa15.72■□□□□ 0.11
DDX41-204ENST00000504807 SLC39A5Q6ZMH5 540 aa15.72■□□□□ 0.11
DDX41-204ENST00000504807 IFNL3Q8IZI9 196 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms