RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 MYL10Q9BUA6 226 aa16.32■□□□□ 0.2
DDR1-253ENST00000504651 AGXT2Q9BYV1 514 aa16.32■□□□□ 0.2
DDR1-253ENST00000504651 A0A0G2JMZ2 1700 aa16.31■□□□□ 0.2
DDR1-253ENST00000504651 GOLGA8BA8MQT2 603 aa16.31■□□□□ 0.2
DDR1-253ENST00000504651 IGF2BP3O00425 579 aaKnown RBP eCLIP16.31■□□□□ 0.2
DDR1-253ENST00000504651 AK2P54819 239 aa16.31■□□□□ 0.2
DDR1-253ENST00000504651 IRX3P78415 501 aaPredicted RBP16.31■□□□□ 0.2
DDR1-253ENST00000504651 ANKRD1Q15327 319 aa16.31■□□□□ 0.2
DDR1-253ENST00000504651 OTUD7BQ6GQQ9 843 aa16.31■□□□□ 0.2
DDR1-253ENST00000504651 APOA5Q6Q788 366 aa16.31■□□□□ 0.2
DDR1-253ENST00000504651 NOL8Q76FK4 1167 aaKnown RBP16.31■□□□□ 0.2
DDR1-253ENST00000504651 MICU3Q86XE3 530 aa16.31■□□□□ 0.2
DDR1-253ENST00000504651 RAB11FIP4Q86YS3 637 aa16.31■□□□□ 0.2
DDR1-253ENST00000504651 IFNL1Q8IU54 200 aa16.31■□□□□ 0.2
DDR1-253ENST00000504651 FAM43AQ8N2R8 423 aa16.31■□□□□ 0.2
DDR1-253ENST00000504651 PTPN18Q99952 460 aa16.31■□□□□ 0.2
DDR1-253ENST00000504651 PNMA3Q9UL41 463 aa16.31■□□□□ 0.2
DDR1-253ENST00000504651 USP17L15C9J2P7 530 aa16.3■□□□□ 0.2
DDR1-253ENST00000504651 USP17L13C9JLJ4 530 aa16.3■□□□□ 0.2
DDR1-253ENST00000504651 USP17L11C9JVI0 530 aa16.3■□□□□ 0.2
DDR1-253ENST00000504651 USP17L18D6R9N7 530 aa16.3■□□□□ 0.2
DDR1-253ENST00000504651 USP17L22D6RA61 530 aa16.3■□□□□ 0.2
DDR1-253ENST00000504651 USP17L17D6RBQ6 530 aa16.3■□□□□ 0.2
DDR1-253ENST00000504651 USP17L19D6RCP7 530 aa16.3■□□□□ 0.2
DDR1-253ENST00000504651 USP17L20D6RJB6 530 aa16.3■□□□□ 0.2
DDR1-253ENST00000504651 PDHXO00330 501 aa16.3■□□□□ 0.2
DDR1-253ENST00000504651 CALM1P0DP23 149 aa16.3■□□□□ 0.2
DDR1-253ENST00000504651 CALM2P0DP24 149 aa16.3■□□□□ 0.2
DDR1-253ENST00000504651 CALM3P0DP25 149 aa16.3■□□□□ 0.2
DDR1-253ENST00000504651 SNHG28P0DPA3 235 aa16.3■□□□□ 0.2
DDR1-253ENST00000504651 RXRAP19793 462 aa16.3■□□□□ 0.2
DDR1-253ENST00000504651 OSBPP22059 807 aa16.3■□□□□ 0.2
DDR1-253ENST00000504651 TM4SF4P48230 202 aa16.3■□□□□ 0.2
DDR1-253ENST00000504651 USP17L24Q0WX57 530 aa16.3■□□□□ 0.2
DDR1-253ENST00000504651 IKQ13123 557 aaPredicted RBP16.3■□□□□ 0.2
DDR1-253ENST00000504651 GRM4Q14833 912 aa16.3■□□□□ 0.2
DDR1-253ENST00000504651 ASPRV1Q53RT3 343 aa16.3■□□□□ 0.2
DDR1-253ENST00000504651 KCTD1Q719H9 257 aa16.3■□□□□ 0.2
DDR1-253ENST00000504651 CTCFLQ8NI51 663 aaPredicted RBP16.3■□□□□ 0.2
DDR1-253ENST00000504651 ALDH8A1Q9H2A2 487 aaPredicted RBP16.3■□□□□ 0.2
DDR1-253ENST00000504651 ZCCHC17Q9NP64 241 aaKnown RBP16.3■□□□□ 0.2
DDR1-253ENST00000504651 BRPF3Q9ULD4 1205 aa16.3■□□□□ 0.2
DDR1-253ENST00000504651 SLC45A1Q9Y2W3 748 aa16.3■□□□□ 0.2
DDR1-253ENST00000504651 RLFQ13129 1914 aa16.29■□□□□ 0.2
DDR1-253ENST00000504651 GOLGA8AA7E2F4 631 aa16.29■□□□□ 0.2
DDR1-253ENST00000504651 ZBTB43O43298 467 aa16.29■□□□□ 0.2
DDR1-253ENST00000504651 ST18O60284 1047 aa16.29■□□□□ 0.2
DDR1-253ENST00000504651 FLOT1O75955 427 aa16.29■□□□□ 0.2
DDR1-253ENST00000504651 PARP1P09874 1014 aaKnown RBP16.29■□□□□ 0.2
DDR1-253ENST00000504651 HOXA7P31268 230 aaPredicted RBP16.29■□□□□ 0.2
DDR1-253ENST00000504651 ZNF543Q08ER8 600 aa16.29■□□□□ 0.2
DDR1-253ENST00000504651 TROAPQ12815 778 aa16.29■□□□□ 0.2
DDR1-253ENST00000504651 TAF1CQ15572 869 aaPredicted RBP16.29■□□□□ 0.2
DDR1-253ENST00000504651 GPATCH4Q5T3I0 446 aaKnown RBP16.29■□□□□ 0.2
DDR1-253ENST00000504651 SAMD1Q6SPF0 538 aaPredicted RBP16.29■□□□□ 0.2
DDR1-253ENST00000504651 CATSPERGQ6ZRH7 1159 aa16.29■□□□□ 0.2
DDR1-253ENST00000504651 CCDC144CPQ8IYA2 1237 aa16.29■□□□□ 0.2
DDR1-253ENST00000504651 PARK7Q99497 189 aaKnown RBP16.29■□□□□ 0.2
DDR1-253ENST00000504651 LARP6Q9BRS8 491 aaKnown RBP16.29■□□□□ 0.2
DDR1-253ENST00000504651 GPCPD1Q9NPB8 672 aa16.29■□□□□ 0.2
DDR1-253ENST00000504651 COL11A1P12107 1806 aaPredicted RBP16.29■□□□□ 0.2
DDR1-253ENST00000504651 TMEM232C9JQI7 657 aa16.28■□□□□ 0.2
DDR1-253ENST00000504651 ALDH1A1P00352 501 aa16.28■□□□□ 0.2
DDR1-253ENST00000504651 GOLGA8HP0CJ92 632 aa16.28■□□□□ 0.2
DDR1-253ENST00000504651 KIF5BP33176 963 aa16.28■□□□□ 0.2
DDR1-253ENST00000504651 STAT2P52630 851 aa16.28■□□□□ 0.2
DDR1-253ENST00000504651 FAM160B2Q86V87 743 aa16.28■□□□□ 0.2
DDR1-253ENST00000504651 MAP3K14Q99558 947 aa16.28■□□□□ 0.2
DDR1-253ENST00000504651 ASCC2Q9H1I8 757 aaPredicted RBP16.28■□□□□ 0.2
DDR1-253ENST00000504651 FEM1BQ9UK73 627 aa16.28■□□□□ 0.2
DDR1-253ENST00000504651 NID2Q14112 1375 aa16.27■□□□□ 0.2
DDR1-253ENST00000504651 METAP2P50579 478 aaKnown RBP eCLIP16.27■□□□□ 0.2
DDR1-253ENST00000504651 RCAN1P53805 252 aa16.27■□□□□ 0.2
DDR1-253ENST00000504651 RTN1Q16799 776 aa16.27■□□□□ 0.2
DDR1-253ENST00000504651 IL27Q8NEV9 243 aa16.27■□□□□ 0.2
DDR1-253ENST00000504651 SMCR8Q8TEV9 937 aaPredicted RBP16.27■□□□□ 0.2
DDR1-253ENST00000504651 SLF1Q9BQI6 1058 aa16.27■□□□□ 0.2
DDR1-253ENST00000504651 FBXO28Q9NVF7 368 aa16.27■□□□□ 0.2
DDR1-253ENST00000504651 MAD2L2Q9UI95 211 aa16.27■□□□□ 0.2
DDR1-253ENST00000504651 MYPNQ86TC9 1320 aa16.26■□□□□ 0.19
DDR1-253ENST00000504651 CYP2C8P10632 490 aa16.26■□□□□ 0.19
DDR1-253ENST00000504651 EVCP57679 992 aa16.26■□□□□ 0.19
DDR1-253ENST00000504651 COG2Q14746 738 aa16.26■□□□□ 0.19
DDR1-253ENST00000504651 TTBK2Q6IQ55 1244 aa16.26■□□□□ 0.19
DDR1-253ENST00000504651 STAG2Q8N3U4 1231 aa16.26■□□□□ 0.19
DDR1-253ENST00000504651 DNAJC5GQ8N7S2 189 aa16.26■□□□□ 0.19
DDR1-253ENST00000504651 CHURC1Q8WUH1 139 aa16.26■□□□□ 0.19
DDR1-253ENST00000504651 KIFC2Q96AC6 838 aa16.26■□□□□ 0.19
DDR1-253ENST00000504651 RBM28Q9NW13 759 aaKnown RBP16.26■□□□□ 0.19
DDR1-253ENST00000504651 PPP1R9AQ9ULJ8 1098 aa16.26■□□□□ 0.19
DDR1-253ENST00000504651 PALM3A6NDB9 673 aaPredicted RBP16.25■□□□□ 0.19
DDR1-253ENST00000504651 SPDYE16A6NNV3 312 aaPredicted RBP16.25■□□□□ 0.19
DDR1-253ENST00000504651 KLRF2D3W0D1 207 aa16.25■□□□□ 0.19
DDR1-253ENST00000504651 DHX16O60231 1041 aaKnown RBP16.25■□□□□ 0.19
DDR1-253ENST00000504651 PLA2G6O60733 806 aa16.25■□□□□ 0.19
DDR1-253ENST00000504651 PDIA3P30101 505 aaKnown RBP16.25■□□□□ 0.19
DDR1-253ENST00000504651 DSG3P32926 999 aa16.25■□□□□ 0.19
DDR1-253ENST00000504651 SLC16A2P36021 539 aa16.25■□□□□ 0.19
DDR1-253ENST00000504651 HERVK_113P62684 666 aa16.25■□□□□ 0.19
DDR1-253ENST00000504651 MAP2K1Q02750 393 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms