RNA–Protein interactions for RNA: ENST00000504441.6

PAAF1-204, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 5

Gene PAAF1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-204ENST00000504441 RNF180Q86T96 592 aa17.04■□□□□ 0.32
PAAF1-204ENST00000504441 SIAH1Q8IUQ4 282 aa17.04■□□□□ 0.32
PAAF1-204ENST00000504441 SH2D4AQ9H788 454 aa17.04■□□□□ 0.32
PAAF1-204ENST00000504441 ARMT1Q9H993 441 aa17.04■□□□□ 0.32
PAAF1-204ENST00000504441 A0A1W2PQ45 241 aaPredicted RBP17.03■□□□□ 0.32
PAAF1-204ENST00000504441 A0A1W2PQY0 241 aa17.03■□□□□ 0.32
PAAF1-204ENST00000504441 PRKAB2O43741 272 aa17.03■□□□□ 0.32
PAAF1-204ENST00000504441 RLBP1P12271 317 aa17.03■□□□□ 0.32
PAAF1-204ENST00000504441 FPGSQ05932 587 aa17.03■□□□□ 0.32
PAAF1-204ENST00000504441 CEP85Q6P2H3 762 aa17.03■□□□□ 0.32
PAAF1-204ENST00000504441 ERC1Q8IUD2 1116 aa17.03■□□□□ 0.32
PAAF1-204ENST00000504441 VCPKMTQ9H867 229 aa17.03■□□□□ 0.32
PAAF1-204ENST00000504441 PRDM6Q9NQX0 595 aa17.03■□□□□ 0.32
PAAF1-204ENST00000504441 TMEM39AQ9NV64 488 aa17.03■□□□□ 0.32
PAAF1-204ENST00000504441 SWAP70Q9UH65 585 aa17.03■□□□□ 0.32
PAAF1-204ENST00000504441 TMX2Q9Y320 296 aa17.03■□□□□ 0.32
PAAF1-204ENST00000504441 CYP2D7A0A087X1C5 515 aa17.02■□□□□ 0.32
PAAF1-204ENST00000504441 WDR46O15213 610 aaKnown RBP17.02■□□□□ 0.32
PAAF1-204ENST00000504441 SLC25A27O95847 323 aa17.02■□□□□ 0.32
PAAF1-204ENST00000504441 GRIN2CQ14957 1233 aa17.02■□□□□ 0.32
PAAF1-204ENST00000504441 SLFNL1Q499Z3 407 aa17.02■□□□□ 0.32
PAAF1-204ENST00000504441 TINF2Q9BSI4 451 aa17.02■□□□□ 0.32
PAAF1-204ENST00000504441 FBXO28Q9NVF7 368 aa17.02■□□□□ 0.32
PAAF1-204ENST00000504441 SMIM22K7EJ46 135 aa17.01■□□□□ 0.31
PAAF1-204ENST00000504441 NRBP1Q9UHY1 535 aa17.01■□□□□ 0.31
PAAF1-204ENST00000504441 CNPY2Q9Y2B0 182 aa17.01■□□□□ 0.31
PAAF1-204ENST00000504441 TCRBV5S4A2TA0A5A2 114 aa17■□□□□ 0.31
PAAF1-204ENST00000504441 KIAA0355O15063 1070 aa17■□□□□ 0.31
PAAF1-204ENST00000504441 MBD4O95243 580 aa17■□□□□ 0.31
PAAF1-204ENST00000504441 EEF2P13639 858 aaKnown RBP17■□□□□ 0.31
PAAF1-204ENST00000504441 AKR1A1P14550 325 aa17■□□□□ 0.31
PAAF1-204ENST00000504441 DNAJB2P25686 324 aa17■□□□□ 0.31
PAAF1-204ENST00000504441 STAT3P40763 770 aa17■□□□□ 0.31
PAAF1-204ENST00000504441 SLC4A3P48751 1232 aa17■□□□□ 0.31
PAAF1-204ENST00000504441 ZNF792Q3KQV3 632 aa17■□□□□ 0.31
PAAF1-204ENST00000504441 RIOX2Q8IUF8 465 aa17■□□□□ 0.31
PAAF1-204ENST00000504441 USP38Q8NB14 1042 aa17■□□□□ 0.31
PAAF1-204ENST00000504441 RHPN1Q8TCX5 695 aa17■□□□□ 0.31
PAAF1-204ENST00000504441 SYMPKQ92797 1274 aaKnown RBP17■□□□□ 0.31
PAAF1-204ENST00000504441 STARD7Q9NQZ5 370 aa17■□□□□ 0.31
PAAF1-204ENST00000504441 TMEM265A0A087WTH1 108 aa16.99■□□□□ 0.31
PAAF1-204ENST00000504441 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.99■□□□□ 0.31
PAAF1-204ENST00000504441 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.99■□□□□ 0.31
PAAF1-204ENST00000504441 DCDC2CA8MYV0 355 aa16.99■□□□□ 0.31
PAAF1-204ENST00000504441 VWA5AO00534 786 aa16.99■□□□□ 0.31
PAAF1-204ENST00000504441 ZNF865P0CJ78 1059 aaPredicted RBP16.99■□□□□ 0.31
PAAF1-204ENST00000504441 CDK8P49336 464 aa16.99■□□□□ 0.31
PAAF1-204ENST00000504441 FAAP100Q0VG06 881 aa16.99■□□□□ 0.31
PAAF1-204ENST00000504441 FAM83BQ5T0W9 1011 aa16.99■□□□□ 0.31
PAAF1-204ENST00000504441 AMOTL1Q8IY63 956 aa16.99■□□□□ 0.31
PAAF1-204ENST00000504441 PPM1EQ8WY54 764 aa16.99■□□□□ 0.31
PAAF1-204ENST00000504441 VCANP13611 3396 aa16.98■□□□□ 0.31
PAAF1-204ENST00000504441 SMCHD1A6NHR9 2005 aa16.98■□□□□ 0.31
PAAF1-204ENST00000504441 IFIT2P09913 472 aaKnown RBP16.98■□□□□ 0.31
PAAF1-204ENST00000504441 ACLYP53396 1101 aa16.98■□□□□ 0.31
PAAF1-204ENST00000504441 HSP90AB4PQ58FF6 505 aa16.98■□□□□ 0.31
PAAF1-204ENST00000504441 CLASRPQ8N2M8 674 aaKnown RBP16.98■□□□□ 0.31
PAAF1-204ENST00000504441 CCDC17Q96LX7 622 aa16.98■□□□□ 0.31
PAAF1-204ENST00000504441 ZNF576Q9H609 170 aa16.98■□□□□ 0.31
PAAF1-204ENST00000504441 GOPCQ9HD26 462 aa16.98■□□□□ 0.31
PAAF1-204ENST00000504441 ZHX1Q9UKY1 873 aaPredicted RBP16.98■□□□□ 0.31
PAAF1-204ENST00000504441 ADAMTS5Q9UNA0 930 aa16.98■□□□□ 0.31
PAAF1-204ENST00000504441 COL11A1P12107 1806 aaPredicted RBP16.98■□□□□ 0.31
PAAF1-204ENST00000504441 MYH8P13535 1937 aa16.98■□□□□ 0.31
PAAF1-204ENST00000504441 ZNFX1Q9P2E3 1918 aaKnown RBP16.98■□□□□ 0.31
PAAF1-204ENST00000504441 SYNRGQ9UMZ2 1314 aa16.97■□□□□ 0.31
PAAF1-204ENST00000504441 PRUNE2Q8WUY3 3088 aa16.97■□□□□ 0.31
PAAF1-204ENST00000504441 USP17L12C9JPN9 530 aa16.97■□□□□ 0.31
PAAF1-204ENST00000504441 USP17L21D6R901 530 aa16.97■□□□□ 0.31
PAAF1-204ENST00000504441 CCER2I3L3R5 266 aa16.97■□□□□ 0.31
PAAF1-204ENST00000504441 ADAMTS4O75173 837 aa16.97■□□□□ 0.31
PAAF1-204ENST00000504441 C12orf60Q5U649 245 aa16.97■□□□□ 0.31
PAAF1-204ENST00000504441 NUP133Q8WUM0 1156 aa16.97■□□□□ 0.31
PAAF1-204ENST00000504441 VTI1AQ96AJ9 217 aa16.97■□□□□ 0.31
PAAF1-204ENST00000504441 TIFAQ96CG3 184 aa16.97■□□□□ 0.31
PAAF1-204ENST00000504441 DDRGK1Q96HY6 314 aa16.97■□□□□ 0.31
PAAF1-204ENST00000504441 KANSL2Q9H9L4 492 aa16.97■□□□□ 0.31
PAAF1-204ENST00000504441 ATP8A2Q9NTI2 1148 aa16.97■□□□□ 0.31
PAAF1-204ENST00000504441 ZNF214Q9UL59 606 aaPredicted RBP16.97■□□□□ 0.31
PAAF1-204ENST00000504441 PPP1R9AQ9ULJ8 1098 aa16.97■□□□□ 0.31
PAAF1-204ENST00000504441 DIS3Q9Y2L1 958 aaKnown RBP16.97■□□□□ 0.31
PAAF1-204ENST00000504441 PARP14Q460N5 1801 aa16.96■□□□□ 0.31
PAAF1-204ENST00000504441 CHGBP05060 677 aa16.96■□□□□ 0.31
PAAF1-204ENST00000504441 KCNA10Q16322 511 aa16.96■□□□□ 0.31
PAAF1-204ENST00000504441 TJAP1Q5JTD0 557 aa16.96■□□□□ 0.31
PAAF1-204ENST00000504441 CCDC129Q6ZRS4 1044 aa16.96■□□□□ 0.31
PAAF1-204ENST00000504441 ANKRD33Q7Z3H0 272 aa16.96■□□□□ 0.31
PAAF1-204ENST00000504441 STK11IPQ8N1F8 1099 aa16.96■□□□□ 0.31
PAAF1-204ENST00000504441 PANK1Q8TE04 598 aa16.96■□□□□ 0.31
PAAF1-204ENST00000504441 DDX11Q96FC9 970 aa16.96■□□□□ 0.31
PAAF1-204ENST00000504441 NUP88Q99567 741 aaPredicted RBP16.96■□□□□ 0.31
PAAF1-204ENST00000504441 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.96■□□□□ 0.311e-7■■■■■ 32.7
PAAF1-204ENST00000504441 TSEN34Q9BSV6 310 aaKnown RBP16.96■□□□□ 0.31
PAAF1-204ENST00000504441 BOLA2Q9H3K6 86 aa16.96■□□□□ 0.31
PAAF1-204ENST00000504441 PAG1Q9NWQ8 432 aa16.96■□□□□ 0.31
PAAF1-204ENST00000504441 FAM184BQ9ULE4 1060 aa16.96■□□□□ 0.31
PAAF1-204ENST00000504441 PLXNA1Q9UIW2 1896 aa16.95■□□□□ 0.3
PAAF1-204ENST00000504441 ROBO3Q96MS0 1386 aa16.95■□□□□ 0.3
PAAF1-204ENST00000504441 MYADML2A6NDP7 307 aa16.95■□□□□ 0.3
PAAF1-204ENST00000504441 GRXCR1A8MXD5 290 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms