RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 PCP11498 1178 aaKnown RBP6.68□□□□□ -1.34
LINC02397-201ENST00000504409 TRIM27P14373 513 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 TTC5Q8N0Z6 440 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 BCL2L13Q9BXK5 485 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 ALDH8A1Q9H2A2 487 aaPredicted RBP6.68□□□□□ -1.34
LINC02397-201ENST00000504409 ECHDC1Q9NTX5 307 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 RSL24D1Q9UHA3 163 aaKnown RBP6.68□□□□□ -1.34
LINC02397-201ENST00000504409 CEP152O94986 1710 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 C21orf2O43822 256 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 GGPS1O95749 300 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 CEBPZQ03701 1054 aaKnown RBP6.68□□□□□ -1.34
LINC02397-201ENST00000504409 PPP1R7Q15435 360 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 MYSM1Q5VVJ2 828 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 ANKRD35Q8N283 1001 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 ZCRB1Q8TBF4 217 aaKnown RBP6.68□□□□□ -1.34
LINC02397-201ENST00000504409 PPP1R13BQ96KQ4 1090 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 EPC1Q9H2F5 836 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 ESCO1Q5FWF5 840 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 PPP4R4Q6NUP7 873 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 TRIM11Q96F44 468 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 EPN3Q9H201 632 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 EPS8L2Q9H6S3 715 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 BAIAP2L1Q9UHR4 511 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 SYNRGQ9UMZ2 1314 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 CTNNA1P35221 906 aaKnown RBP6.68□□□□□ -1.34
LINC02397-201ENST00000504409 SOGA3Q5TF21 947 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 PALM2Q8IXS6 379 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 ATP6V0A1Q93050 837 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 SDCCAG3Q96C92 435 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 ZNF839A8K0R7 811 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 PODXLO00592 558 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 RANBP1P43487 201 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 TAF11Q15544 211 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 TTC39AQ5SRH9 613 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 GSDMBQ8TAX9 411 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 PRDM4Q9UKN5 801 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 PRR23AA6NEV1 266 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 HGSO14964 777 aaPredicted RBP6.68□□□□□ -1.34
LINC02397-201ENST00000504409 NR1D1P20393 614 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 WDR93Q6P2C0 686 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 AP4S1Q9Y587 144 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 DNM2P50570 870 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 ROR2Q01974 943 aaKnown RBP6.68□□□□□ -1.34
LINC02397-201ENST00000504409 ZNF569Q5MCW4 686 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 GALNT17Q6IS24 598 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 CTAGE3PQ8IX95 158 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 TANGO6Q9C0B7 1094 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 CCDC113Q9H0I3 377 aa6.68□□□□□ -1.34
LINC02397-201ENST00000504409 CHD2O14647 1828 aaKnown RBP6.67□□□□□ -1.34
LINC02397-201ENST00000504409 RCAN1P53805 252 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 OLR1P78380 273 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 XIAPP98170 497 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 TNIP2Q8NFZ5 429 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 OPTNQ96CV9 577 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 SGSM3Q96HU1 749 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 WDR91A4D1P6 747 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 KCNQ3O43525 872 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 CDR2Q01850 454 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 MAP3K10Q02779 954 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 RNF17Q9BXT8 1623 aaKnown RBP6.67□□□□□ -1.34
LINC02397-201ENST00000504409 SURF6O75683 361 aaKnown RBP6.67□□□□□ -1.34
LINC02397-201ENST00000504409 CCDC93Q567U6 631 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 PRR16Q569H4 304 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 NCOA7Q8NI08 942 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 PPP4R1Q8TF05 950 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 TEKT4Q8WW24 435 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 OSBPL3Q9H4L5 887 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 SLC52A1Q9NWF4 448 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 GID8Q9NWU2 228 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 PPP2R2CQ9Y2T4 447 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 ADGRA3Q8IWK6 1321 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 WDR62O43379 1518 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 IQGAP3Q86VI3 1631 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 MCF2LO15068 1137 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 C1orf131Q8NDD1 294 aaKnown RBP6.67□□□□□ -1.34
LINC02397-201ENST00000504409 SESN1Q9Y6P5 492 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 FAM169AQ9Y6X4 670 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 PBRM1Q86U86 1689 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 MINK1Q8N4C8 1332 aaPredicted RBP6.67□□□□□ -1.34
LINC02397-201ENST00000504409 WDR19Q8NEZ3 1342 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 KRT75O95678 551 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 AP1B1Q10567 949 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 KRT72Q14CN4 511 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 CC2D1AQ6P1N0 951 aaPredicted RBP6.67□□□□□ -1.34
LINC02397-201ENST00000504409 PNMA8AQ86V59 439 aaPredicted RBP6.67□□□□□ -1.34
LINC02397-201ENST00000504409 AOPEPQ8N6M6 819 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 ATP7BP35670 1465 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 FSBPO95073 299 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 CCDC166P0CW27 439 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 MTIF2P46199 727 aaKnown RBP6.67□□□□□ -1.34
LINC02397-201ENST00000504409 ANLNQ9NQW6 1124 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 TRMT1Q9NXH9 659 aaKnown RBP6.67□□□□□ -1.34
LINC02397-201ENST00000504409 RUSC2Q8N2Y8 1516 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 TULP2O00295 520 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 EIF3HO15372 352 aaKnown RBP eCLIP6.67□□□□□ -1.34
LINC02397-201ENST00000504409 CASP8Q14790 479 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 AGBL2Q5U5Z8 902 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 PRR23BQ6ZRT6 265 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 CYTH2Q99418 400 aa6.67□□□□□ -1.34
LINC02397-201ENST00000504409 MRPL46Q9H2W6 279 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms