RNA–Protein interactions for RNA: ENST00000504331.1

OTUD4-204, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 591 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-204ENST00000504331 AGGF1Q8N302 714 aaeCLIP6.56□□□□□ -1.36
OTUD4-204ENST00000504331 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.56□□□□□ -1.36
OTUD4-204ENST00000504331 GRAPLQ8TC17 118 aaPredicted RBP6.56□□□□□ -1.36
OTUD4-204ENST00000504331 ZNF296Q8WUU4 475 aaPredicted RBP6.56□□□□□ -1.36
OTUD4-204ENST00000504331 ZNF428Q96B54 188 aa6.56□□□□□ -1.36
OTUD4-204ENST00000504331 ERO1AQ96HE7 468 aa6.56□□□□□ -1.36
OTUD4-204ENST00000504331 POLR3GLQ9BT43 218 aa6.56□□□□□ -1.36
OTUD4-204ENST00000504331 GSX2Q9BZM3 304 aa6.56□□□□□ -1.36
OTUD4-204ENST00000504331 ZC3H12CQ9C0D7 883 aaKnown RBP6.56□□□□□ -1.36
OTUD4-204ENST00000504331 FRRS1LQ9P0K9 344 aa6.56□□□□□ -1.36
OTUD4-204ENST00000504331 SIPA1L3O60292 1781 aaPredicted RBP6.56□□□□□ -1.36
OTUD4-204ENST00000504331 BACH1O14867 736 aa6.55□□□□□ -1.36
OTUD4-204ENST00000504331 WDHD1O75717 1129 aaPredicted RBP6.55□□□□□ -1.36
OTUD4-204ENST00000504331 RAD17O75943 681 aa6.55□□□□□ -1.36
OTUD4-204ENST00000504331 NTSR2O95665 410 aa6.55□□□□□ -1.36
OTUD4-204ENST00000504331 NFKB1P19838 968 aa6.55□□□□□ -1.36
OTUD4-204ENST00000504331 FXR1P51114 621 aaKnown RBP eCLIP6.55□□□□□ -1.36
OTUD4-204ENST00000504331 HLFQ16534 295 aa6.55□□□□□ -1.36
OTUD4-204ENST00000504331 FBLN7Q53RD9 439 aa6.55□□□□□ -1.36
OTUD4-204ENST00000504331 OLFM4Q6UX06 510 aa6.55□□□□□ -1.36
OTUD4-204ENST00000504331 RASAL3Q86YV0 1011 aa6.55□□□□□ -1.36
OTUD4-204ENST00000504331 SUSD3Q96L08 255 aa6.55□□□□□ -1.36
OTUD4-204ENST00000504331 PCMTD1Q96MG8 357 aaPredicted RBP6.55□□□□□ -1.36
OTUD4-204ENST00000504331 UBL7Q96S82 380 aaPredicted RBP6.55□□□□□ -1.36
OTUD4-204ENST00000504331 EFCC1Q9HA90 598 aa6.55□□□□□ -1.36
OTUD4-204ENST00000504331 STOML1Q9UBI4 398 aa6.55□□□□□ -1.36
OTUD4-204ENST00000504331 NUP98P52948 1817 aa6.55□□□□□ -1.36
OTUD4-204ENST00000504331 MYO3BQ8WXR4 1341 aa6.54□□□□□ -1.36
OTUD4-204ENST00000504331 FAM177BA6PVY3 158 aa6.54□□□□□ -1.36
OTUD4-204ENST00000504331 U2SURPO15042 1029 aaKnown RBP6.54□□□□□ -1.36
OTUD4-204ENST00000504331 ZBTB48P10074 688 aaPredicted RBP6.54□□□□□ -1.36
OTUD4-204ENST00000504331 GLB1P16278 677 aa6.54□□□□□ -1.36
OTUD4-204ENST00000504331 PRMT2P55345 433 aa6.54□□□□□ -1.36
OTUD4-204ENST00000504331 ZNF280AP59817 542 aaPredicted RBP6.54□□□□□ -1.36
OTUD4-204ENST00000504331 KIF4BQ2VIQ3 1234 aa6.54□□□□□ -1.36
OTUD4-204ENST00000504331 C1orf53Q5VUE5 145 aa6.54□□□□□ -1.36
OTUD4-204ENST00000504331 SUSD4Q5VX71 490 aa6.54□□□□□ -1.36
OTUD4-204ENST00000504331 ARMC10Q8N2F6 343 aa6.54□□□□□ -1.36
OTUD4-204ENST00000504331 OGFOD1Q8N543 542 aa6.54□□□□□ -1.36
OTUD4-204ENST00000504331 TRPM4Q8TD43 1214 aa6.54□□□□□ -1.36
OTUD4-204ENST00000504331 ARMC5Q96C12 935 aa6.54□□□□□ -1.36
OTUD4-204ENST00000504331 ANKIB1Q9P2G1 1089 aa6.54□□□□□ -1.36
OTUD4-204ENST00000504331 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.54□□□□□ -1.36
OTUD4-204ENST00000504331 TNRC18O15417 2968 aaPredicted RBP6.54□□□□□ -1.36
OTUD4-204ENST00000504331 ABCC4O15439 1325 aa6.53□□□□□ -1.36
OTUD4-204ENST00000504331 SH3TC1Q8TE82 1336 aa6.53□□□□□ -1.36
OTUD4-204ENST00000504331 ZBTB42B2RXF5 422 aa6.53□□□□□ -1.36
OTUD4-204ENST00000504331 PSMD14O00487 310 aa6.53□□□□□ -1.36
OTUD4-204ENST00000504331 SF3B3Q15393 1217 aaKnown RBP6.53□□□□□ -1.36
OTUD4-204ENST00000504331 CDCA5Q96FF9 252 aa6.53□□□□□ -1.36
OTUD4-204ENST00000504331 PHACTR1Q9C0D0 580 aa6.53□□□□□ -1.36
OTUD4-204ENST00000504331 ANKRD36CQ5JPF3 1778 aa6.53□□□□□ -1.36
OTUD4-204ENST00000504331 PAPPA2Q9BXP8 1791 aa6.53□□□□□ -1.36
OTUD4-204ENST00000504331 KIAA0100Q14667 2235 aaKnown RBP6.53□□□□□ -1.36
OTUD4-204ENST00000504331 YDJCA8MPS7 323 aa6.52□□□□□ -1.37
OTUD4-204ENST00000504331 PPP1R12BO60237 982 aaPredicted RBP6.52□□□□□ -1.37
OTUD4-204ENST00000504331 KCNA1Q09470 495 aa6.52□□□□□ -1.37
OTUD4-204ENST00000504331 MAP3K11Q16584 847 aa6.52□□□□□ -1.37
OTUD4-204ENST00000504331 TBC1D10BQ4KMP7 808 aaPredicted RBP6.52□□□□□ -1.37
OTUD4-204ENST00000504331 CBLL1Q75N03 491 aa6.52□□□□□ -1.37
OTUD4-204ENST00000504331 BTLAQ7Z6A9 289 aa6.52□□□□□ -1.37
OTUD4-204ENST00000504331 SLC17A8Q8NDX2 589 aa6.52□□□□□ -1.37
OTUD4-204ENST00000504331 TTC9Q92623 222 aa6.52□□□□□ -1.37
OTUD4-204ENST00000504331 SNRKQ9NRH2 765 aa6.52□□□□□ -1.37
OTUD4-204ENST00000504331 PPP2R3BQ9Y5P8 575 aa6.52□□□□□ -1.37
OTUD4-204ENST00000504331 RBBP6Q7Z6E9 1792 aaKnown RBP6.52□□□□□ -1.37
OTUD4-204ENST00000504331 KCNQ3O43525 872 aa6.51□□□□□ -1.37
OTUD4-204ENST00000504331 ECE2O60344 883 aa6.51□□□□□ -1.37
OTUD4-204ENST00000504331 TBC1D8O95759 1140 aa6.51□□□□□ -1.37
OTUD4-204ENST00000504331 PRKAR2BP31323 418 aa6.51□□□□□ -1.37
OTUD4-204ENST00000504331 RPS8P62241 208 aaKnown RBP6.51□□□□□ -1.37
OTUD4-204ENST00000504331 IRF5Q13568 498 aa6.51□□□□□ -1.37
OTUD4-204ENST00000504331 MCM6Q14566 821 aa6.51□□□□□ -1.37
OTUD4-204ENST00000504331 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.51□□□□□ -1.37
OTUD4-204ENST00000504331 APOBEC3FQ8IUX4 373 aaKnown RBP6.51□□□□□ -1.37
OTUD4-204ENST00000504331 BANK1Q8NDB2 785 aa6.51□□□□□ -1.37
OTUD4-204ENST00000504331 DBNDD2Q9BQY9 259 aa6.51□□□□□ -1.37
OTUD4-204ENST00000504331 HTATIP2Q9BUP3 242 aa6.51□□□□□ -1.37
OTUD4-204ENST00000504331 C7orf69Q9H7B7 122 aa6.51□□□□□ -1.37
OTUD4-204ENST00000504331 GGA3Q9NZ52 723 aa6.51□□□□□ -1.37
OTUD4-204ENST00000504331 TRMT112Q9UI30 125 aaKnown RBP6.51□□□□□ -1.37
OTUD4-204ENST00000504331 PTPN22Q9Y2R2 807 aa6.51□□□□□ -1.37
OTUD4-204ENST00000504331 RRP7AQ9Y3A4 280 aaKnown RBP6.51□□□□□ -1.37
OTUD4-204ENST00000504331 HCN4Q9Y3Q4 1203 aa6.51□□□□□ -1.37
OTUD4-204ENST00000504331 TRIM17Q9Y577 477 aa6.51□□□□□ -1.37
OTUD4-204ENST00000504331 NR2E3Q9Y5X4 410 aa6.51□□□□□ -1.37
OTUD4-204ENST00000504331 ABCC12Q96J65 1359 aa6.51□□□□□ -1.37
OTUD4-204ENST00000504331 COL4A5P29400 1685 aa6.51□□□□□ -1.37
OTUD4-204ENST00000504331 UBN2Q6ZU65 1347 aa6.5□□□□□ -1.37
OTUD4-204ENST00000504331 DDX60Q8IY21 1712 aaKnown RBP6.5□□□□□ -1.37
OTUD4-204ENST00000504331 COL1A1P02452 1464 aaPredicted RBP6.5□□□□□ -1.37
OTUD4-204ENST00000504331 USP17L3A6NCW0 530 aa6.5□□□□□ -1.37
OTUD4-204ENST00000504331 USP17L4A6NCW7 530 aa6.5□□□□□ -1.37
OTUD4-204ENST00000504331 TCERG1O14776 1098 aaKnown RBP6.5□□□□□ -1.37
OTUD4-204ENST00000504331 DHX15O43143 795 aaKnown RBP6.5□□□□□ -1.37
OTUD4-204ENST00000504331 GPTP24298 496 aa6.5□□□□□ -1.37
OTUD4-204ENST00000504331 GRNP28799 593 aaKnown RBP6.5□□□□□ -1.37
OTUD4-204ENST00000504331 EIF4A1P60842 406 aaKnown RBP6.5□□□□□ -1.37
OTUD4-204ENST00000504331 SP3Q02447 781 aa6.5□□□□□ -1.37
OTUD4-204ENST00000504331 CCINQ13939 588 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms