RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, humanhuman

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-233ENST00000504203 ZNF592Q92610 1267 aa14.84□□□□□ -0.03
MATR3-233ENST00000504203 SAMSN1Q9NSI8 373 aaKnown RBP14.84□□□□□ -0.03
MATR3-233ENST00000504203 PODXL2Q9NZ53 605 aa14.84□□□□□ -0.03
MATR3-233ENST00000504203 PCDHA4Q9UN74 947 aa14.84□□□□□ -0.03
MATR3-233ENST00000504203 CD44P16070 742 aaKnown RBP14.83□□□□□ -0.04
MATR3-233ENST00000504203 CASP1P29466 404 aa14.83□□□□□ -0.04
MATR3-233ENST00000504203 BTDP43251 543 aa14.83□□□□□ -0.04
MATR3-233ENST00000504203 NCBP1Q09161 790 aaKnown RBP14.83□□□□□ -0.04
MATR3-233ENST00000504203 HSP90AA4PQ58FG1 418 aa14.83□□□□□ -0.04
MATR3-233ENST00000504203 TMEM139Q8IV31 216 aa14.83□□□□□ -0.04
MATR3-233ENST00000504203 SEPT12Q8IYM1 358 aa14.83□□□□□ -0.04
MATR3-233ENST00000504203 GPKOWQ92917 476 aaPredicted RBP eCLIP14.83□□□□□ -0.045e-8■■□□□ 12.1
MATR3-233ENST00000504203 FAM163AQ96GL9 167 aaPredicted RBP14.83□□□□□ -0.04
MATR3-233ENST00000504203 TMEM47Q9BQJ4 181 aa14.83□□□□□ -0.04
MATR3-233ENST00000504203 GGA1Q9UJY5 639 aa14.83□□□□□ -0.04
MATR3-233ENST00000504203 SNED1Q8TER0 1413 aa14.83□□□□□ -0.04
MATR3-233ENST00000504203 PALM3A6NDB9 673 aaPredicted RBP14.82□□□□□ -0.04
MATR3-233ENST00000504203 HOXA10P31260 410 aaPredicted RBP14.82□□□□□ -0.04
MATR3-233ENST00000504203 MCM7P33993 719 aa14.82□□□□□ -0.04
MATR3-233ENST00000504203 ST5P78524 1137 aa14.82□□□□□ -0.04
MATR3-233ENST00000504203 PTPN21Q16825 1174 aa14.82□□□□□ -0.04
MATR3-233ENST00000504203 PDXDC2PQ6P474 469 aa14.82□□□□□ -0.04
MATR3-233ENST00000504203 APTXQ7Z2E3 356 aaKnown RBP14.82□□□□□ -0.04
MATR3-233ENST00000504203 KIF18AQ8NI77 898 aa14.82□□□□□ -0.04
MATR3-233ENST00000504203 RBM17Q96I25 401 aaKnown RBP14.82□□□□□ -0.04
MATR3-233ENST00000504203 AFF2P51816 1311 aa14.82□□□□□ -0.04
MATR3-233ENST00000504203 BBOX1O75936 387 aa14.82□□□□□ -0.04
MATR3-233ENST00000504203 SPATA1Q5VX52 437 aa14.82□□□□□ -0.04
MATR3-233ENST00000504203 C16orf86Q6ZW13 317 aa14.82□□□□□ -0.04
MATR3-233ENST00000504203 IQUBQ8NA54 791 aa14.82□□□□□ -0.04
MATR3-233ENST00000504203 DAGLBQ8NCG7 672 aa14.82□□□□□ -0.04
MATR3-233ENST00000504203 MTRQ99707 1265 aa14.82□□□□□ -0.04
MATR3-233ENST00000504203 SAP30BPQ9UHR5 308 aaKnown RBP14.82□□□□□ -0.04
MATR3-233ENST00000504203 PPP1R3GB7ZBB8 358 aa14.81□□□□□ -0.04
MATR3-233ENST00000504203 CDK11BP21127 795 aaKnown RBP14.81□□□□□ -0.04
MATR3-233ENST00000504203 RHBDL3P58872 404 aa14.81□□□□□ -0.04
MATR3-233ENST00000504203 NR1I3Q14994 352 aa14.81□□□□□ -0.04
MATR3-233ENST00000504203 WWC2Q6AWC2 1192 aa14.81□□□□□ -0.04
MATR3-233ENST00000504203 PYM1Q9BRP8 204 aaKnown RBP14.81□□□□□ -0.04
MATR3-233ENST00000504203 ZNF287Q9HBT7 754 aa14.81□□□□□ -0.04
MATR3-233ENST00000504203 POLLQ9UGP5 575 aa14.81□□□□□ -0.04
MATR3-233ENST00000504203 LTBP1Q14766 1721 aa14.81□□□□□ -0.04
MATR3-233ENST00000504203 A0A1B0GTH6 734 aa14.81□□□□□ -0.04
MATR3-233ENST00000504203 KLRG2A4D1S0 409 aaPredicted RBP14.81□□□□□ -0.04
MATR3-233ENST00000504203 LONP1P36776 959 aaKnown RBP14.81□□□□□ -0.04
MATR3-233ENST00000504203 CDK8P49336 464 aa14.81□□□□□ -0.04
MATR3-233ENST00000504203 GOLGA8FQ08AF8 430 aa14.81□□□□□ -0.04
MATR3-233ENST00000504203 GOLGA8DPQ0D2H9 430 aa14.81□□□□□ -0.04
MATR3-233ENST00000504203 SPECC1LQ69YQ0 1117 aa14.81□□□□□ -0.04
MATR3-233ENST00000504203 GALNT17Q6IS24 598 aa14.81□□□□□ -0.04
MATR3-233ENST00000504203 FAM177A1Q8N128 213 aaPredicted RBP14.81□□□□□ -0.04
MATR3-233ENST00000504203 TBC1D16Q8TBP0 767 aa14.81□□□□□ -0.04
MATR3-233ENST00000504203 BARHL2Q9NY43 387 aa14.81□□□□□ -0.04
MATR3-233ENST00000504203 PCDHA6Q9UN73 950 aa14.81□□□□□ -0.04
MATR3-233ENST00000504203 STX8Q9UNK0 236 aa14.81□□□□□ -0.04
MATR3-233ENST00000504203 PCDHA8Q9Y5H6 950 aa14.81□□□□□ -0.04
MATR3-233ENST00000504203 GAKO14976 1311 aa14.81□□□□□ -0.04
MATR3-233ENST00000504203 FLT1P17948 1338 aa14.81□□□□□ -0.04
MATR3-233ENST00000504203 STXBP3O00186 592 aa14.8□□□□□ -0.04
MATR3-233ENST00000504203 TUBB4AP04350 444 aa14.8□□□□□ -0.04
MATR3-233ENST00000504203 PLCG2P16885 1265 aa14.8□□□□□ -0.04
MATR3-233ENST00000504203 DDR1Q08345 913 aa14.8□□□□□ -0.04
MATR3-233ENST00000504203 CDKAL1Q5VV42 579 aa14.8□□□□□ -0.04
MATR3-233ENST00000504203 FCHSD1Q86WN1 690 aa14.8□□□□□ -0.04
MATR3-233ENST00000504203 TEX11Q8IYF3 940 aa14.8□□□□□ -0.04
MATR3-233ENST00000504203 TC2NQ8N9U0 490 aa14.8□□□□□ -0.04
MATR3-233ENST00000504203 NEDD1Q8NHV4 660 aa14.8□□□□□ -0.04
MATR3-233ENST00000504203 RASGRP4Q8TDF6 673 aa14.8□□□□□ -0.04
MATR3-233ENST00000504203 CRAMP1Q96RY5 1269 aa14.8□□□□□ -0.04
MATR3-233ENST00000504203 NOVP48745 357 aa14.8□□□□□ -0.04
MATR3-233ENST00000504203 SLC27A3Q5K4L6 730 aa14.8□□□□□ -0.04
MATR3-233ENST00000504203 MFSD14BQ5SR56 506 aa14.8□□□□□ -0.04
MATR3-233ENST00000504203 MEX3CQ5U5Q3 659 aaKnown RBP14.8□□□□□ -0.04
MATR3-233ENST00000504203 CCDC148Q8NFR7 591 aa14.8□□□□□ -0.04
MATR3-233ENST00000504203 STAMQ92783 540 aa14.8□□□□□ -0.04
MATR3-233ENST00000504203 LZTS2Q9BRK4 669 aa14.8□□□□□ -0.04
MATR3-233ENST00000504203 SPZ1Q9BXG8 430 aa14.8□□□□□ -0.04
MATR3-233ENST00000504203 LRRC37AA6NMS7 1700 aa14.79□□□□□ -0.04
MATR3-233ENST00000504203 SYNRGQ9UMZ2 1314 aa14.79□□□□□ -0.04
MATR3-233ENST00000504203 ARHGAP6O43182 974 aa14.79□□□□□ -0.04
MATR3-233ENST00000504203 CCP110O43303 1012 aa14.79□□□□□ -0.04
MATR3-233ENST00000504203 GTPBP6O43824 516 aaPredicted RBP14.79□□□□□ -0.04
MATR3-233ENST00000504203 SMYD4Q8IYR2 804 aaPredicted RBP14.79□□□□□ -0.04
MATR3-233ENST00000504203 TBC1D22AQ8WUA7 517 aa14.79□□□□□ -0.04
MATR3-233ENST00000504203 EYA3Q99504 573 aa14.79□□□□□ -0.04
MATR3-233ENST00000504203 TRPC5Q9UL62 973 aaPredicted RBP14.79□□□□□ -0.04
MATR3-233ENST00000504203 MYH1P12882 1939 aa14.79□□□□□ -0.04
MATR3-233ENST00000504203 KLRF2D3W0D1 207 aa14.78□□□□□ -0.04
MATR3-233ENST00000504203 POLRMTO00411 1230 aaKnown RBP14.78□□□□□ -0.04
MATR3-233ENST00000504203 NAA30Q147X3 362 aaPredicted RBP14.78□□□□□ -0.04
MATR3-233ENST00000504203 REXO1L1PQ8IX06 675 aa14.78□□□□□ -0.04
MATR3-233ENST00000504203 PDCL2Q8N4E4 241 aa14.78□□□□□ -0.04
MATR3-233ENST00000504203 CCDC94Q9BW85 323 aaPredicted RBP14.78□□□□□ -0.04
MATR3-233ENST00000504203 L2HGDHQ9H9P8 463 aa14.78□□□□□ -0.04
MATR3-233ENST00000504203 FOCADQ5VW36 1801 aa14.78□□□□□ -0.04
MATR3-233ENST00000504203 CCDC194A0A1B0GVG4 234 aa14.78□□□□□ -0.04
MATR3-233ENST00000504203 STX17P56962 302 aa14.78□□□□□ -0.04
MATR3-233ENST00000504203 KLHL10Q6JEL2 608 aa14.78□□□□□ -0.04
MATR3-233ENST00000504203 RASGRP2Q7LDG7 609 aa14.78□□□□□ -0.04
MATR3-233ENST00000504203 HEATR3Q7Z4Q2 680 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms